RNA–Protein interactions for RNA: ENST00000380025.8

NDEL1-202, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5 BASIC

Gene NDEL1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-202ENST00000380025 GTPBP6O43824 516 aaPredicted RBP28.31■■■□□ 2.12
NDEL1-202ENST00000380025 REXO1Q8N1G1 1221 aaKnown RBP28.31■■■□□ 2.12
NDEL1-202ENST00000380025 DISC1Q9NRI5 854 aa28.31■■■□□ 2.12
NDEL1-202ENST00000380025 PP2D1A8MPX8 630 aa28.3■■■□□ 2.12
NDEL1-202ENST00000380025 LETM2Q2VYF4 491 aa28.3■■■□□ 2.12
NDEL1-202ENST00000380025 SH3BP5LQ7L8J4 393 aa28.3■■■□□ 2.12
NDEL1-202ENST00000380025 VSTM4Q8IW00 320 aa28.3■■■□□ 2.12
NDEL1-202ENST00000380025 COA7Q96BR5 231 aa28.3■■■□□ 2.12
NDEL1-202ENST00000380025 TMEM232C9JQI7 657 aa28.3■■■□□ 2.12
NDEL1-202ENST00000380025 NEK8Q86SG6 692 aa28.3■■■□□ 2.12
NDEL1-202ENST00000380025 JMJD4Q9H9V9 463 aa28.3■■■□□ 2.12
NDEL1-202ENST00000380025 BIN2Q9UBW5 565 aaPredicted RBP28.3■■■□□ 2.12
NDEL1-202ENST00000380025 PPP1R3GB7ZBB8 358 aa28.29■■■□□ 2.12
NDEL1-202ENST00000380025 CCNT1O60563 726 aaKnown RBP28.29■■■□□ 2.12
NDEL1-202ENST00000380025 POTEAQ6S8J7 498 aa28.29■■■□□ 2.12
NDEL1-202ENST00000380025 SMYD4Q8IYR2 804 aaPredicted RBP28.29■■■□□ 2.12
NDEL1-202ENST00000380025 ADGRF4Q8IZF3 695 aa28.29■■■□□ 2.12
NDEL1-202ENST00000380025 SAMSN1Q9NSI8 373 aaKnown RBP28.29■■■□□ 2.12
NDEL1-202ENST00000380025 FAM196BA6NMK8 535 aa28.28■■■□□ 2.12
NDEL1-202ENST00000380025 NPM3O75607 178 aaKnown RBP28.28■■■□□ 2.12
NDEL1-202ENST00000380025 SFPQP23246 707 aaKnown RBP eCLIP28.28■■■□□ 2.12
NDEL1-202ENST00000380025 STAT6P42226 847 aa28.28■■■□□ 2.12
NDEL1-202ENST00000380025 ATP2B2Q01814 1243 aa28.28■■■□□ 2.12
NDEL1-202ENST00000380025 DHX8Q14562 1220 aaKnown RBP28.28■■■□□ 2.12
NDEL1-202ENST00000380025 NAALADL2Q58DX5 795 aa28.28■■■□□ 2.12
NDEL1-202ENST00000380025 JAKMIP3Q5VZ66 844 aa28.28■■■□□ 2.12
NDEL1-202ENST00000380025 TTBK2Q6IQ55 1244 aa28.28■■■□□ 2.12
NDEL1-202ENST00000380025 TBCKQ8TEA7 893 aa28.28■■■□□ 2.12
NDEL1-202ENST00000380025 TMEM260Q9NX78 707 aa28.28■■■□□ 2.12
NDEL1-202ENST00000380025 PI4KBQ9UBF8 816 aa28.28■■■□□ 2.12
NDEL1-202ENST00000380025 CC2D2BQ6DHV5 1058 aa28.28■■■□□ 2.12
NDEL1-202ENST00000380025 CCSER1Q9C0I3 900 aa28.28■■■□□ 2.12
NDEL1-202ENST00000380025 OR52Z1P0C646 297 aa28.27■■■□□ 2.12
NDEL1-202ENST00000380025 GPATCH4Q5T3I0 446 aaKnown RBP28.27■■■□□ 2.12
NDEL1-202ENST00000380025 C16orf45Q96MC5 204 aaPredicted RBP28.27■■■□□ 2.12
NDEL1-202ENST00000380025 SYNRGQ9UMZ2 1314 aa28.27■■■□□ 2.12
NDEL1-202ENST00000380025 PNMA6FA0A0J9YX94 578 aa28.27■■■□□ 2.12
NDEL1-202ENST00000380025 USP27XA6NNY8 438 aa28.27■■■□□ 2.12
NDEL1-202ENST00000380025 ADCY7P51828 1080 aa28.27■■■□□ 2.12
NDEL1-202ENST00000380025 SHROOM1Q2M3G4 852 aaPredicted RBP28.27■■■□□ 2.12
NDEL1-202ENST00000380025 PPP4R3BQ5MIZ7 849 aa28.27■■■□□ 2.12
NDEL1-202ENST00000380025 KLHL10Q6JEL2 608 aa28.27■■■□□ 2.12
NDEL1-202ENST00000380025 MYRIPQ8NFW9 859 aa28.27■■■□□ 2.12
NDEL1-202ENST00000380025 YDJCA8MPS7 323 aa28.26■■■□□ 2.11
NDEL1-202ENST00000380025 PPP1R11O60927 126 aaPredicted RBP28.26■■■□□ 2.11
NDEL1-202ENST00000380025 CDK11BP21127 795 aaKnown RBP28.26■■■□□ 2.11
NDEL1-202ENST00000380025 SPATA1Q5VX52 437 aa28.26■■■□□ 2.11
NDEL1-202ENST00000380025 SUPT20HQ8NEM7 779 aa28.26■■■□□ 2.11
NDEL1-202ENST00000380025 PSME4Q14997 1843 aa28.26■■■□□ 2.11
NDEL1-202ENST00000380025 UBA7P41226 1012 aa28.26■■■□□ 2.11
NDEL1-202ENST00000380025 TPD52L1Q16890 204 aaPredicted RBP28.26■■■□□ 2.11
NDEL1-202ENST00000380025 CCDC96Q2M329 555 aa28.26■■■□□ 2.11
NDEL1-202ENST00000380025 C21orf2O43822 256 aa28.25■■■□□ 2.11
NDEL1-202ENST00000380025 ORC2Q13416 577 aaPredicted RBP28.25■■■□□ 2.11
NDEL1-202ENST00000380025 PTPN21Q16825 1174 aa28.25■■■□□ 2.11
NDEL1-202ENST00000380025 CERKLQ49MI3 558 aaPredicted RBP28.25■■■□□ 2.11
NDEL1-202ENST00000380025 RRAGBQ5VZM2 374 aa28.25■■■□□ 2.11
NDEL1-202ENST00000380025 PPP1R18Q6NYC8 613 aa28.25■■■□□ 2.11
NDEL1-202ENST00000380025 KCTD1Q719H9 257 aa28.25■■■□□ 2.11
NDEL1-202ENST00000380025 ZSCAN29Q8IWY8 852 aaPredicted RBP28.25■■■□□ 2.11
NDEL1-202ENST00000380025 PDGFDQ9GZP0 370 aaPredicted RBP28.25■■■□□ 2.11
NDEL1-202ENST00000380025 KCND1Q9NSA2 647 aa28.25■■■□□ 2.11
NDEL1-202ENST00000380025 PPIP5K2O43314 1243 aa28.24■■■□□ 2.11
NDEL1-202ENST00000380025 SLC16A2P36021 539 aa28.24■■■□□ 2.11
NDEL1-202ENST00000380025 STX17P56962 302 aa28.24■■■□□ 2.11
NDEL1-202ENST00000380025 TATDN1Q6P1N9 297 aa28.24■■■□□ 2.11
NDEL1-202ENST00000380025 AK8Q96MA6 479 aa28.24■■■□□ 2.11
NDEL1-202ENST00000380025 MKL1Q969V6 931 aa28.24■■■□□ 2.11
NDEL1-202ENST00000380025 MTMR8Q96EF0 704 aa28.24■■■□□ 2.11
NDEL1-202ENST00000380025 TDRD3Q9H7E2 651 aaKnown RBP28.24■■■□□ 2.11
NDEL1-202ENST00000380025 RPN1P04843 607 aaKnown RBP28.23■■■□□ 2.11
NDEL1-202ENST00000380025 EEF2P13639 858 aaKnown RBP28.23■■■□□ 2.11
NDEL1-202ENST00000380025 RASSF8Q8NHQ8 419 aa28.23■■■□□ 2.11
NDEL1-202ENST00000380025 GOLGB1Q14789 3259 aaKnown RBP28.23■■■□□ 2.11
NDEL1-202ENST00000380025 CCAR2Q8N163 923 aaKnown RBP28.23■■■□□ 2.11
NDEL1-202ENST00000380025 LRRC15Q8TF66 581 aa28.23■■■□□ 2.11
NDEL1-202ENST00000380025 NYAP2Q9P242 653 aa28.23■■■□□ 2.11
NDEL1-202ENST00000380025 USP17L10C9JJH3 530 aa28.22■■■□□ 2.11
NDEL1-202ENST00000380025 CDKAL1Q5VV42 579 aa28.22■■■□□ 2.11
NDEL1-202ENST00000380025 POTEDQ86YR6 584 aa28.22■■■□□ 2.11
NDEL1-202ENST00000380025 KANSL2Q9H9L4 492 aa28.22■■■□□ 2.11
NDEL1-202ENST00000380025 RIC8AQ9NPQ8 531 aa28.22■■■□□ 2.11
NDEL1-202ENST00000380025 RMND1Q9NWS8 449 aa28.22■■■□□ 2.11
NDEL1-202ENST00000380025 ATRNL1Q5VV63 1379 aa28.22■■■□□ 2.11
NDEL1-202ENST00000380025 ZBTB5O15062 677 aa28.21■■■□□ 2.11
NDEL1-202ENST00000380025 EDIL3O43854 480 aa28.21■■■□□ 2.11
NDEL1-202ENST00000380025 TNNT1P13805 278 aa28.21■■■□□ 2.11
NDEL1-202ENST00000380025 ZNF658Q5TYW1 1059 aaPredicted RBP28.21■■■□□ 2.11
NDEL1-202ENST00000380025 APTXQ7Z2E3 356 aaKnown RBP28.21■■■□□ 2.11
NDEL1-202ENST00000380025 CTNND2Q9UQB3 1225 aa28.21■■■□□ 2.11
NDEL1-202ENST00000380025 CABP7Q86V35 215 aa28.21■■■□□ 2.11
NDEL1-202ENST00000380025 PLIN2Q99541 437 aa28.21■■■□□ 2.11
NDEL1-202ENST00000380025 TRIM34Q9BYJ4 488 aa28.21■■■□□ 2.11
NDEL1-202ENST00000380025 KBTBD4Q9NVX7 518 aa28.21■■■□□ 2.11
NDEL1-202ENST00000380025 TBX2Q13207 712 aaPredicted RBP28.2■■■□□ 2.11
NDEL1-202ENST00000380025 SIAH1Q8IUQ4 282 aa28.2■■■□□ 2.11
NDEL1-202ENST00000380025 PRMT6Q96LA8 375 aaPredicted RBP28.2■■■□□ 2.11
NDEL1-202ENST00000380025 ARFGEF1Q9Y6D6 1849 aa28.2■■■□□ 2.11
NDEL1-202ENST00000380025 A0A1B0GTH6 734 aa28.2■■■□□ 2.1
NDEL1-202ENST00000380025 KCNJ6P48051 423 aa28.2■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms