RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 GPR75-ASB3A0A0A6YYF3 556 aa8.32□□□□□ -1.08
CDKL5-201ENST00000379989 SPDYE5A6NIY4 337 aa8.32□□□□□ -1.08
CDKL5-201ENST00000379989 SOWAHDA6NJG2 315 aa8.32□□□□□ -1.08
CDKL5-201ENST00000379989 EIF4E1BA6NMX2 242 aaKnown RBP8.32□□□□□ -1.08
CDKL5-201ENST00000379989 IKBKBO14920 756 aa8.32□□□□□ -1.08
CDKL5-201ENST00000379989 DIAPH2O60879 1101 aa8.32□□□□□ -1.08
CDKL5-201ENST00000379989 PPP1R37O75864 691 aa8.32□□□□□ -1.08
CDKL5-201ENST00000379989 SASH1O94885 1247 aa8.32□□□□□ -1.08
CDKL5-201ENST00000379989 AMPD2Q01433 879 aa8.32□□□□□ -1.08
CDKL5-201ENST00000379989 CWF19L2Q2TBE0 894 aaKnown RBP8.32□□□□□ -1.08
CDKL5-201ENST00000379989 TNNI3KQ59H18 835 aa8.32□□□□□ -1.08
CDKL5-201ENST00000379989 USPL1Q5W0Q7 1092 aa8.32□□□□□ -1.08
CDKL5-201ENST00000379989 HAUS7Q99871 368 aa8.32□□□□□ -1.08
CDKL5-201ENST00000379989 RCOR1Q9UKL0 485 aa8.32□□□□□ -1.08
CDKL5-201ENST00000379989 ASB3Q9Y575 518 aa8.32□□□□□ -1.08
CDKL5-201ENST00000379989 ADGRG1Q9Y653 693 aa8.32□□□□□ -1.08
CDKL5-201ENST00000379989 FPGT-TNNI3KV9GXZ4 949 aa8.32□□□□□ -1.08
CDKL5-201ENST00000379989 SPATA31A6Q5VVP1 1343 aa8.32□□□□□ -1.08
CDKL5-201ENST00000379989 DNAJC8O75937 253 aaPredicted RBP8.32□□□□□ -1.08
CDKL5-201ENST00000379989 CYP11B2P19099 503 aa8.32□□□□□ -1.08
CDKL5-201ENST00000379989 RPL13P26373 211 aaKnown RBP8.32□□□□□ -1.08
CDKL5-201ENST00000379989 FMR1NBQ8N0W7 255 aaPredicted RBP8.32□□□□□ -1.08
CDKL5-201ENST00000379989 MIPOL1Q8TD10 442 aa8.32□□□□□ -1.08
CDKL5-201ENST00000379989 KCNN1Q92952 543 aa8.32□□□□□ -1.08
CDKL5-201ENST00000379989 NAPGQ99747 312 aaPredicted RBP8.32□□□□□ -1.08
CDKL5-201ENST00000379989 SDF4Q9BRK5 362 aa8.32□□□□□ -1.08
CDKL5-201ENST00000379989 OCEL1Q9H607 264 aa8.32□□□□□ -1.08
CDKL5-201ENST00000379989 BTG4Q9NY30 223 aa8.32□□□□□ -1.08
CDKL5-201ENST00000379989 NOP53Q9NZM5 478 aaKnown RBP8.32□□□□□ -1.08
CDKL5-201ENST00000379989 HDAC6Q9UBN7 1215 aa8.32□□□□□ -1.08
CDKL5-201ENST00000379989 CYP46A1Q9Y6A2 500 aa8.32□□□□□ -1.08
CDKL5-201ENST00000379989 BCORQ6W2J9 1755 aa8.32□□□□□ -1.08
CDKL5-201ENST00000379989 ZNF609O15014 1411 aa8.32□□□□□ -1.08
CDKL5-201ENST00000379989 COL5A3P25940 1745 aaPredicted RBP8.31□□□□□ -1.08
CDKL5-201ENST00000379989 TARSL2A2RTX5 802 aaKnown RBP8.31□□□□□ -1.08
CDKL5-201ENST00000379989 GOLGA6L10A6NI86 522 aa8.31□□□□□ -1.08
CDKL5-201ENST00000379989 EYA2O00167 538 aa8.31□□□□□ -1.08
CDKL5-201ENST00000379989 CREB3O43889 395 aa8.31□□□□□ -1.08
CDKL5-201ENST00000379989 GJA8P48165 433 aa8.31□□□□□ -1.08
CDKL5-201ENST00000379989 NLRP12P59046 1061 aa8.31□□□□□ -1.08
CDKL5-201ENST00000379989 FOXO4P98177 505 aa8.31□□□□□ -1.08
CDKL5-201ENST00000379989 COL9A3Q14050 684 aaPredicted RBP8.31□□□□□ -1.08
CDKL5-201ENST00000379989 PABPC1LQ4VXU2 614 aaKnown RBP8.31□□□□□ -1.08
CDKL5-201ENST00000379989 LACTB2Q53H82 288 aaPredicted RBP8.31□□□□□ -1.08
CDKL5-201ENST00000379989 ATL3Q6DD88 541 aa8.31□□□□□ -1.08
CDKL5-201ENST00000379989 GALNT17Q6IS24 598 aa8.31□□□□□ -1.08
CDKL5-201ENST00000379989 CCNI2Q6ZMN8 369 aaPredicted RBP8.31□□□□□ -1.08
CDKL5-201ENST00000379989 FBXL16Q8N461 479 aa8.31□□□□□ -1.08
CDKL5-201ENST00000379989 AENQ8WTP8 325 aaKnown RBP8.31□□□□□ -1.08
CDKL5-201ENST00000379989 DDX17Q92841 729 aaKnown RBP8.31□□□□□ -1.08
CDKL5-201ENST00000379989 MAP4K1Q92918 833 aa8.31□□□□□ -1.08
CDKL5-201ENST00000379989 RRP36Q96EU6 259 aaKnown RBP8.31□□□□□ -1.08
CDKL5-201ENST00000379989 DTNBP1Q96EV8 351 aa8.31□□□□□ -1.08
CDKL5-201ENST00000379989 CYFIP2Q96F07 1278 aa8.31□□□□□ -1.08
CDKL5-201ENST00000379989 SPATA31A5Q5VU36 1347 aa8.31□□□□□ -1.08
CDKL5-201ENST00000379989 SPATA31A7Q8IWB4 1347 aa8.31□□□□□ -1.08
CDKL5-201ENST00000379989 NBPF26B4DH59 902 aa8.31□□□□□ -1.08
CDKL5-201ENST00000379989 MYL6BP14649 208 aa8.31□□□□□ -1.08
CDKL5-201ENST00000379989 Q4G0T1 1027 aa8.31□□□□□ -1.08
CDKL5-201ENST00000379989 NBPF14Q5TI25 921 aa8.31□□□□□ -1.08
CDKL5-201ENST00000379989 MSL1Q68DK7 614 aa8.31□□□□□ -1.08
CDKL5-201ENST00000379989 DPY19L2Q6NUT2 758 aa8.31□□□□□ -1.08
CDKL5-201ENST00000379989 HIBCHQ6NVY1 386 aaPredicted RBP8.31□□□□□ -1.08
CDKL5-201ENST00000379989 KDM7AQ6ZMT4 941 aa8.31□□□□□ -1.08
CDKL5-201ENST00000379989 CERKQ8TCT0 537 aa8.31□□□□□ -1.08
CDKL5-201ENST00000379989 AGAP11Q8TF27 550 aa8.31□□□□□ -1.08
CDKL5-201ENST00000379989 SLC35B4Q969S0 331 aa8.31□□□□□ -1.08
CDKL5-201ENST00000379989 ZWILCHQ9H900 591 aa8.31□□□□□ -1.08
CDKL5-201ENST00000379989 AATFQ9NY61 560 aaKnown RBP eCLIP8.31□□□□□ -1.08
CDKL5-201ENST00000379989 SPATA7Q9P0W8 599 aa8.31□□□□□ -1.08
CDKL5-201ENST00000379989 NUB1Q9Y5A7 615 aa8.31□□□□□ -1.08
CDKL5-201ENST00000379989 RASSF10A6NK89 507 aa8.31□□□□□ -1.08
CDKL5-201ENST00000379989 LGR5O75473 907 aa8.31□□□□□ -1.08
CDKL5-201ENST00000379989 ABL1P00519 1130 aa8.31□□□□□ -1.08
CDKL5-201ENST00000379989 TUBP50607 506 aa8.31□□□□□ -1.08
CDKL5-201ENST00000379989 RAD9BQ6WBX8 426 aa8.31□□□□□ -1.08
CDKL5-201ENST00000379989 ELOA2Q8IYF1 753 aaPredicted RBP8.31□□□□□ -1.08
CDKL5-201ENST00000379989 WDR19Q8NEZ3 1342 aa8.3□□□□□ -1.08
CDKL5-201ENST00000379989 APBA1Q02410 837 aa8.3□□□□□ -1.08
CDKL5-201ENST00000379989 AIMP1Q12904 312 aaKnown RBP8.3□□□□□ -1.08
CDKL5-201ENST00000379989 RIPK1Q13546 671 aa8.3□□□□□ -1.08
CDKL5-201ENST00000379989 KCTD16Q68DU8 428 aa8.3□□□□□ -1.08
CDKL5-201ENST00000379989 CLEC4GQ6UXB4 293 aa8.3□□□□□ -1.08
CDKL5-201ENST00000379989 FAM114A1Q8IWE2 563 aa8.3□□□□□ -1.08
CDKL5-201ENST00000379989 CCHCR1Q8TD31 782 aa8.3□□□□□ -1.08
CDKL5-201ENST00000379989 PREBQ9HCU5 417 aa8.3□□□□□ -1.08
CDKL5-201ENST00000379989 TMOD4Q9NZQ9 345 aa8.3□□□□□ -1.08
CDKL5-201ENST00000379989 NUP98P52948 1817 aa8.3□□□□□ -1.08
CDKL5-201ENST00000379989 N4BP3O15049 544 aa8.3□□□□□ -1.08
CDKL5-201ENST00000379989 ATP2C2O75185 946 aa8.3□□□□□ -1.08
CDKL5-201ENST00000379989 LUC7L3O95232 432 aaKnown RBP8.3□□□□□ -1.08
CDKL5-201ENST00000379989 MBD4O95243 580 aa8.3□□□□□ -1.08
CDKL5-201ENST00000379989 NPTXRO95502 500 aa8.3□□□□□ -1.08
CDKL5-201ENST00000379989 ALDH3A1P30838 453 aa8.3□□□□□ -1.08
CDKL5-201ENST00000379989 TTF1Q15361 905 aaPredicted RBP8.3□□□□□ -1.08
CDKL5-201ENST00000379989 CDC37Q16543 378 aaPredicted RBP8.3□□□□□ -1.08
CDKL5-201ENST00000379989 TAX1BP1Q86VP1 789 aa8.3□□□□□ -1.08
CDKL5-201ENST00000379989 SDR16C5Q8N3Y7 309 aa8.3□□□□□ -1.08
CDKL5-201ENST00000379989 BRF1Q92994 677 aa8.3□□□□□ -1.08
CDKL5-201ENST00000379989 DSCC1Q9BVC3 393 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms