RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 FAM153BP0C7A2 387 aa9.39□□□□□ -0.91
NHLRC3-201ENST00000379599 MYZAPP0CAP1 466 aa9.39□□□□□ -0.91
NHLRC3-201ENST00000379599 ZFXP17010 805 aaPredicted RBP9.39□□□□□ -0.91
NHLRC3-201ENST00000379599 PSMC4P43686 418 aa9.39□□□□□ -0.91
NHLRC3-201ENST00000379599 RAD23BP54727 409 aa9.39□□□□□ -0.91
NHLRC3-201ENST00000379599 MECOMQ03112 1051 aa9.39□□□□□ -0.91
NHLRC3-201ENST00000379599 FMR1Q06787 632 aaKnown RBP eCLIP9.39□□□□□ -0.91
NHLRC3-201ENST00000379599 SEPT2Q15019 361 aa9.39□□□□□ -0.91
NHLRC3-201ENST00000379599 FAM153CQ494X1 144 aa9.39□□□□□ -0.91
NHLRC3-201ENST00000379599 KLHL10Q6JEL2 608 aa9.39□□□□□ -0.91
NHLRC3-201ENST00000379599 CYP26C1Q6V0L0 522 aa9.39□□□□□ -0.91
NHLRC3-201ENST00000379599 CCDC129Q6ZRS4 1044 aa9.39□□□□□ -0.91
NHLRC3-201ENST00000379599 DZIP1Q86YF9 867 aaKnown RBP9.39□□□□□ -0.91
NHLRC3-201ENST00000379599 SLC17A8Q8NDX2 589 aa9.39□□□□□ -0.91
NHLRC3-201ENST00000379599 ANKRD24Q8TF21 1146 aa9.39□□□□□ -0.91
NHLRC3-201ENST00000379599 TEKT1Q969V4 418 aa9.39□□□□□ -0.91
NHLRC3-201ENST00000379599 RMDN2Q96LZ7 410 aa9.39□□□□□ -0.91
NHLRC3-201ENST00000379599 FAM153AQ9UHL3 310 aa9.39□□□□□ -0.91
NHLRC3-201ENST00000379599 TUBE1Q9UJT0 475 aa9.39□□□□□ -0.91
NHLRC3-201ENST00000379599 PLAAQ9Y263 795 aa9.39□□□□□ -0.91
NHLRC3-201ENST00000379599 HECW2Q9P2P5 1572 aa9.39□□□□□ -0.91
NHLRC3-201ENST00000379599 TMEM221A6NGB7 291 aa9.38□□□□□ -0.91
NHLRC3-201ENST00000379599 SRRM3A6NNA2 597 aaPredicted RBP9.38□□□□□ -0.91
NHLRC3-201ENST00000379599 RAPGEF3O95398 923 aa9.38□□□□□ -0.91
NHLRC3-201ENST00000379599 BEND3Q5T5X7 828 aa9.38□□□□□ -0.91
NHLRC3-201ENST00000379599 C8orf74Q6P047 294 aa9.38□□□□□ -0.91
NHLRC3-201ENST00000379599 NCCRP1Q6ZVX7 275 aaPredicted RBP9.38□□□□□ -0.91
NHLRC3-201ENST00000379599 RHPN1Q8TCX5 695 aa9.38□□□□□ -0.91
NHLRC3-201ENST00000379599 CARD9Q9H257 536 aa9.38□□□□□ -0.91
NHLRC3-201ENST00000379599 AGAP1Q9UPQ3 857 aa9.38□□□□□ -0.91
NHLRC3-201ENST00000379599 SBNO2Q9Y2G9 1366 aa9.38□□□□□ -0.91
NHLRC3-201ENST00000379599 ABLIM1O14639 778 aa9.38□□□□□ -0.91
NHLRC3-201ENST00000379599 GSTA1P08263 222 aa9.38□□□□□ -0.91
NHLRC3-201ENST00000379599 GBP1P32455 592 aa9.38□□□□□ -0.91
NHLRC3-201ENST00000379599 CDC37Q16543 378 aaPredicted RBP9.38□□□□□ -0.91
NHLRC3-201ENST00000379599 KIAA0753Q2KHM9 967 aa9.38□□□□□ -0.91
NHLRC3-201ENST00000379599 SGSM1Q2NKQ1 1148 aa9.38□□□□□ -0.91
NHLRC3-201ENST00000379599 TSNAXIP1Q2TAA8 658 aa9.38□□□□□ -0.91
NHLRC3-201ENST00000379599 SLC4A8Q2Y0W8 1093 aa9.38□□□□□ -0.91
NHLRC3-201ENST00000379599 G2E3Q7L622 706 aa9.38□□□□□ -0.91
NHLRC3-201ENST00000379599 PTF1AQ7RTS3 328 aa9.38□□□□□ -0.91
NHLRC3-201ENST00000379599 APBB1IPQ7Z5R6 666 aaPredicted RBP9.38□□□□□ -0.91
NHLRC3-201ENST00000379599 ARHGAP18Q8N392 663 aa9.38□□□□□ -0.91
NHLRC3-201ENST00000379599 SMYD1Q8NB12 490 aa9.38□□□□□ -0.91
NHLRC3-201ENST00000379599 LINS1Q8NG48 757 aa9.38□□□□□ -0.91
NHLRC3-201ENST00000379599 ECT2Q9H8V3 914 aa9.38□□□□□ -0.91
NHLRC3-201ENST00000379599 NCOA5Q9HCD5 579 aaKnown RBP9.38□□□□□ -0.91
NHLRC3-201ENST00000379599 SMARCAL1Q9NZC9 954 aa9.38□□□□□ -0.91
NHLRC3-201ENST00000379599 ADAM22Q9P0K1 906 aa9.38□□□□□ -0.91
NHLRC3-201ENST00000379599 MACROD2A1Z1Q3 448 aa9.37□□□□□ -0.91
NHLRC3-201ENST00000379599 PENKP01210 267 aaPredicted RBP9.37□□□□□ -0.91
NHLRC3-201ENST00000379599 CMA1P23946 247 aa9.37□□□□□ -0.91
NHLRC3-201ENST00000379599 CDC25AP30304 524 aa9.37□□□□□ -0.91
NHLRC3-201ENST00000379599 STX17P56962 302 aa9.37□□□□□ -0.91
NHLRC3-201ENST00000379599 MCL1Q07820 350 aa9.37□□□□□ -0.91
NHLRC3-201ENST00000379599 IMMTQ16891 758 aaKnown RBP9.37□□□□□ -0.91
NHLRC3-201ENST00000379599 PAPD7Q5XG87 772 aaKnown RBP9.37□□□□□ -0.91
NHLRC3-201ENST00000379599 ILDR1Q86SU0 546 aaPredicted RBP9.37□□□□□ -0.91
NHLRC3-201ENST00000379599 PALB2Q86YC2 1186 aa9.37□□□□□ -0.91
NHLRC3-201ENST00000379599 TRIML1Q8N9V2 468 aa9.37□□□□□ -0.91
NHLRC3-201ENST00000379599 CAVIN3Q969G5 261 aa9.37□□□□□ -0.91
NHLRC3-201ENST00000379599 HIC2Q96JB3 615 aa9.37□□□□□ -0.91
NHLRC3-201ENST00000379599 CLMNQ96JQ2 1002 aa9.37□□□□□ -0.91
NHLRC3-201ENST00000379599 PHAXQ9H814 394 aaKnown RBP9.37□□□□□ -0.91
NHLRC3-201ENST00000379599 EPN1Q9Y6I3 576 aaPredicted RBP9.37□□□□□ -0.91
NHLRC3-201ENST00000379599 LMTK2Q8IWU2 1503 aa9.37□□□□□ -0.91
NHLRC3-201ENST00000379599 HGSO14964 777 aaPredicted RBP9.37□□□□□ -0.91
NHLRC3-201ENST00000379599 KRT38O76015 456 aa9.37□□□□□ -0.91
NHLRC3-201ENST00000379599 KRT16P08779 473 aa9.37□□□□□ -0.91
NHLRC3-201ENST00000379599 ALADP13716 330 aa9.37□□□□□ -0.91
NHLRC3-201ENST00000379599 CARSP49589 748 aaKnown RBP9.37□□□□□ -0.91
NHLRC3-201ENST00000379599 CLCN2P51788 898 aa9.37□□□□□ -0.91
NHLRC3-201ENST00000379599 TMED1Q13445 227 aa9.37□□□□□ -0.91
NHLRC3-201ENST00000379599 RUFY4Q6ZNE9 571 aa9.37□□□□□ -0.91
NHLRC3-201ENST00000379599 CCDC65Q8IXS2 484 aa9.37□□□□□ -0.91
NHLRC3-201ENST00000379599 FNBP4Q8N3X1 1017 aaPredicted RBP9.37□□□□□ -0.91
NHLRC3-201ENST00000379599 OR2W6PQ8NHA6 318 aa9.37□□□□□ -0.91
NHLRC3-201ENST00000379599 MAP4K1Q92918 833 aa9.37□□□□□ -0.91
NHLRC3-201ENST00000379599 TRAPPC9Q96Q05 1148 aa9.37□□□□□ -0.91
NHLRC3-201ENST00000379599 NR1H4Q96RI1 486 aaPredicted RBP9.37□□□□□ -0.91
NHLRC3-201ENST00000379599 ELAC2Q9BQ52 826 aaKnown RBP9.37□□□□□ -0.91
NHLRC3-201ENST00000379599 HAUS4Q9H6D7 363 aa9.37□□□□□ -0.91
NHLRC3-201ENST00000379599 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.37□□□□□ -0.91
NHLRC3-201ENST00000379599 INTUQ9ULD6 942 aa9.37□□□□□ -0.91
NHLRC3-201ENST00000379599 ZMYND8Q9ULU4 1186 aaPredicted RBP9.37□□□□□ -0.91
NHLRC3-201ENST00000379599 SLC12A4Q9UP95 1085 aa9.37□□□□□ -0.91
NHLRC3-201ENST00000379599 ZNF711Q9Y462 761 aa9.37□□□□□ -0.91
NHLRC3-201ENST00000379599 EMILIN1Q9Y6C2 1016 aa9.37□□□□□ -0.91
NHLRC3-201ENST00000379599 DYTNA2CJ06 578 aa9.37□□□□□ -0.91
NHLRC3-201ENST00000379599 NDUFB5O43674 189 aa9.37□□□□□ -0.91
NHLRC3-201ENST00000379599 GLRX3O76003 335 aaKnown RBP9.37□□□□□ -0.91
NHLRC3-201ENST00000379599 ATP6V1C1P21283 382 aa9.37□□□□□ -0.91
NHLRC3-201ENST00000379599 DRD4P21917 467 aa9.37□□□□□ -0.91
NHLRC3-201ENST00000379599 MSH2P43246 934 aa9.37□□□□□ -0.91
NHLRC3-201ENST00000379599 NMIQ13287 307 aaPredicted RBP9.37□□□□□ -0.91
NHLRC3-201ENST00000379599 BTG3Q14201 252 aaPredicted RBP9.37□□□□□ -0.91
NHLRC3-201ENST00000379599 MUM1Q2TAK8 710 aa9.37□□□□□ -0.91
NHLRC3-201ENST00000379599 OLFML2BQ68BL8 750 aa9.37□□□□□ -0.91
NHLRC3-201ENST00000379599 TRIM50Q86XT4 487 aa9.37□□□□□ -0.91
NHLRC3-201ENST00000379599 RAB11FIP4Q86YS3 637 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms