RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 LDHDQ86WU2 507 aa11.88□□□□□ -0.51
POLR2J3-201ENST00000379340 SUPT20HQ8NEM7 779 aa11.88□□□□□ -0.51
POLR2J3-201ENST00000379340 PAGE5Q96GU1 130 aa11.88□□□□□ -0.51
POLR2J3-201ENST00000379340 EPSTI1Q96J88 318 aa11.88□□□□□ -0.51
POLR2J3-201ENST00000379340 CCDC17Q96LX7 622 aa11.88□□□□□ -0.51
POLR2J3-201ENST00000379340 ZDHHC15Q96MV8 337 aa11.88□□□□□ -0.51
POLR2J3-201ENST00000379340 TAOK3Q9H2K8 898 aa11.88□□□□□ -0.51
POLR2J3-201ENST00000379340 DHX36Q9H2U1 1008 aaKnown RBP11.88□□□□□ -0.51
POLR2J3-201ENST00000379340 BAZ2BQ9UIF8 2168 aaKnown RBP11.88□□□□□ -0.51
POLR2J3-201ENST00000379340 ZNF541Q9H0D2 1346 aa11.88□□□□□ -0.51
POLR2J3-201ENST00000379340 LTBP3Q9NS15 1303 aa11.88□□□□□ -0.51
POLR2J3-201ENST00000379340 F8W031 263 aaPredicted RBP11.88□□□□□ -0.51
POLR2J3-201ENST00000379340 WNT7AO00755 349 aa11.88□□□□□ -0.51
POLR2J3-201ENST00000379340 TTLL1O95922 423 aa11.88□□□□□ -0.51
POLR2J3-201ENST00000379340 PRR29P0C7W0 189 aa11.88□□□□□ -0.51
POLR2J3-201ENST00000379340 LMOD1P29536 600 aaPredicted RBP11.88□□□□□ -0.51
POLR2J3-201ENST00000379340 CRKP46108 304 aa11.88□□□□□ -0.51
POLR2J3-201ENST00000379340 KCNJ6P48051 423 aa11.88□□□□□ -0.51
POLR2J3-201ENST00000379340 E2F4Q16254 413 aa11.88□□□□□ -0.51
POLR2J3-201ENST00000379340 NOM1Q5C9Z4 860 aaKnown RBP11.88□□□□□ -0.51
POLR2J3-201ENST00000379340 ISM2Q6H9L7 571 aa11.88□□□□□ -0.51
POLR2J3-201ENST00000379340 USP49Q70CQ1 688 aa11.88□□□□□ -0.51
POLR2J3-201ENST00000379340 C4orf32Q8N8J7 132 aa11.88□□□□□ -0.51
POLR2J3-201ENST00000379340 HSD3B7Q9H2F3 369 aa11.88□□□□□ -0.51
POLR2J3-201ENST00000379340 DDX4Q9NQI0 724 aaKnown RBP11.88□□□□□ -0.51
POLR2J3-201ENST00000379340 KCND1Q9NSA2 647 aa11.88□□□□□ -0.51
POLR2J3-201ENST00000379340 ADAMTSL1Q8N6G6 1762 aa11.87□□□□□ -0.51
POLR2J3-201ENST00000379340 A0A087X0B3 334 aa11.87□□□□□ -0.51
POLR2J3-201ENST00000379340 CCDC85CA6NKD9 419 aa11.87□□□□□ -0.51
POLR2J3-201ENST00000379340 GTPBP6O43824 516 aaPredicted RBP11.87□□□□□ -0.51
POLR2J3-201ENST00000379340 SERPINC1P01008 464 aa11.87□□□□□ -0.51
POLR2J3-201ENST00000379340 MYL1P05976 194 aa11.87□□□□□ -0.51
POLR2J3-201ENST00000379340 PDHBP11177 359 aa11.87□□□□□ -0.51
POLR2J3-201ENST00000379340 AKR1B1P15121 316 aa11.87□□□□□ -0.51
POLR2J3-201ENST00000379340 BMP6P22004 513 aa11.87□□□□□ -0.51
POLR2J3-201ENST00000379340 UBASH3AP57075 661 aa11.87□□□□□ -0.51
POLR2J3-201ENST00000379340 FMR1Q06787 632 aaKnown RBP eCLIP11.87□□□□□ -0.51
POLR2J3-201ENST00000379340 DPYDQ12882 1025 aa11.87□□□□□ -0.51
POLR2J3-201ENST00000379340 LRMPQ12912 555 aa11.87□□□□□ -0.51
POLR2J3-201ENST00000379340 NONOQ15233 471 aaKnown RBP eCLIP11.87□□□□□ -0.51
POLR2J3-201ENST00000379340 EAPPQ56P03 285 aaPredicted RBP11.87□□□□□ -0.51
POLR2J3-201ENST00000379340 APOBEC3HQ6NTF7 200 aaKnown RBP11.87□□□□□ -0.51
POLR2J3-201ENST00000379340 TYW1BQ6NUM6 668 aa11.87□□□□□ -0.51
POLR2J3-201ENST00000379340 DTHD1Q6ZMT9 781 aa11.87□□□□□ -0.51
POLR2J3-201ENST00000379340 TMC6Q7Z403 805 aa11.87□□□□□ -0.51
POLR2J3-201ENST00000379340 L3MBTL3Q96JM7 780 aaPredicted RBP11.87□□□□□ -0.51
POLR2J3-201ENST00000379340 AK8Q96MA6 479 aa11.87□□□□□ -0.51
POLR2J3-201ENST00000379340 IDI2Q9BXS1 227 aa11.87□□□□□ -0.51
POLR2J3-201ENST00000379340 RMND1Q9NWS8 449 aa11.87□□□□□ -0.51
POLR2J3-201ENST00000379340 MYH4Q9Y623 1939 aa11.87□□□□□ -0.51
POLR2J3-201ENST00000379340 PSME4Q14997 1843 aa11.87□□□□□ -0.51
POLR2J3-201ENST00000379340 COL2A1P02458 1487 aaPredicted RBP11.86□□□□□ -0.51
POLR2J3-201ENST00000379340 SMCO2A6NFE2 343 aa11.86□□□□□ -0.51
POLR2J3-201ENST00000379340 RASSF10A6NK89 507 aa11.86□□□□□ -0.51
POLR2J3-201ENST00000379340 ECE2O60344 883 aa11.86□□□□□ -0.51
POLR2J3-201ENST00000379340 GOLGA8HP0CJ92 632 aa11.86□□□□□ -0.51
POLR2J3-201ENST00000379340 SHMT1P34896 483 aa11.86□□□□□ -0.51
POLR2J3-201ENST00000379340 GPATCH4Q5T3I0 446 aaKnown RBP11.86□□□□□ -0.51
POLR2J3-201ENST00000379340 MAP1SQ66K74 1059 aaPredicted RBP11.86□□□□□ -0.51
POLR2J3-201ENST00000379340 USP17L2Q6R6M4 530 aa11.86□□□□□ -0.51
POLR2J3-201ENST00000379340 FILIP1Q7Z7B0 1213 aa11.86□□□□□ -0.51
POLR2J3-201ENST00000379340 CCSER1Q9C0I3 900 aa11.86□□□□□ -0.51
POLR2J3-201ENST00000379340 CUEDC2Q9H467 287 aa11.86□□□□□ -0.51
POLR2J3-201ENST00000379340 MAGEF1Q9HAY2 307 aa11.86□□□□□ -0.51
POLR2J3-201ENST00000379340 SERPINA10Q9UK55 444 aa11.86□□□□□ -0.51
POLR2J3-201ENST00000379340 SIPA1L1O43166 1804 aa11.85□□□□□ -0.51
POLR2J3-201ENST00000379340 USP17L5A8MUK1 530 aa11.85□□□□□ -0.51
POLR2J3-201ENST00000379340 SKILP12757 684 aa11.85□□□□□ -0.51
POLR2J3-201ENST00000379340 SFPQP23246 707 aaKnown RBP eCLIP11.85□□□□□ -0.51
POLR2J3-201ENST00000379340 SCNN1DP51172 638 aa11.85□□□□□ -0.51
POLR2J3-201ENST00000379340 CCZ1BP86790 482 aa11.85□□□□□ -0.51
POLR2J3-201ENST00000379340 CCZ1P86791 482 aaPredicted RBP11.85□□□□□ -0.51
POLR2J3-201ENST00000379340 MLLT1Q03111 559 aaPredicted RBP11.85□□□□□ -0.51
POLR2J3-201ENST00000379340 INF2Q27J81 1249 aa11.85□□□□□ -0.51
POLR2J3-201ENST00000379340 CFAP100Q494V2 611 aa11.85□□□□□ -0.51
POLR2J3-201ENST00000379340 DACT2Q5SW24 774 aa11.85□□□□□ -0.51
POLR2J3-201ENST00000379340 PDXDC2PQ6P474 469 aa11.85□□□□□ -0.51
POLR2J3-201ENST00000379340 VSTM4Q8IW00 320 aa11.85□□□□□ -0.51
POLR2J3-201ENST00000379340 GRAMD1CQ8IYS0 662 aa11.85□□□□□ -0.51
POLR2J3-201ENST00000379340 CCDC112Q8NEF3 446 aa11.85□□□□□ -0.51
POLR2J3-201ENST00000379340 PIGSQ96S52 555 aa11.85□□□□□ -0.51
POLR2J3-201ENST00000379340 DBNDD1Q9H9R9 158 aa11.85□□□□□ -0.51
POLR2J3-201ENST00000379340 FANCLQ9NW38 375 aa11.85□□□□□ -0.51
POLR2J3-201ENST00000379340 MTMR7Q9Y216 660 aa11.85□□□□□ -0.51
POLR2J3-201ENST00000379340 NFE2L3Q9Y4A8 694 aa11.85□□□□□ -0.51
POLR2J3-201ENST00000379340 SCN4AP35499 1836 aa11.85□□□□□ -0.51
POLR2J3-201ENST00000379340 UQCRHLA0A096LP55 91 aa11.84□□□□□ -0.51
POLR2J3-201ENST00000379340 DYNC1I1O14576 645 aa11.84□□□□□ -0.51
POLR2J3-201ENST00000379340 UQCRHP07919 91 aa11.84□□□□□ -0.51
POLR2J3-201ENST00000379340 ZNF18P17022 549 aa11.84□□□□□ -0.51
POLR2J3-201ENST00000379340 AFMP43652 599 aa11.84□□□□□ -0.51
POLR2J3-201ENST00000379340 RGS19P49795 217 aa11.84□□□□□ -0.51
POLR2J3-201ENST00000379340 ZNF543Q08ER8 600 aa11.84□□□□□ -0.51
POLR2J3-201ENST00000379340 IL17AQ16552 155 aa11.84□□□□□ -0.51
POLR2J3-201ENST00000379340 DEFB115Q30KQ5 88 aa11.84□□□□□ -0.51
POLR2J3-201ENST00000379340 NEK8Q86SG6 692 aa11.84□□□□□ -0.51
POLR2J3-201ENST00000379340 REXO1Q8N1G1 1221 aaKnown RBP11.84□□□□□ -0.51
POLR2J3-201ENST00000379340 C17orf53Q8N3J3 647 aaPredicted RBP11.84□□□□□ -0.51
POLR2J3-201ENST00000379340 MYRIPQ8NFW9 859 aa11.84□□□□□ -0.51
POLR2J3-201ENST00000379340 RASGRP4Q8TDF6 673 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms