RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 TKFCQ3LXA3 575 aa29.02■■■□□ 2.24
TNFRSF4-201ENST00000379236 RASGRP2Q7LDG7 609 aa29.02■■■□□ 2.24
TNFRSF4-201ENST00000379236 SYNGAP1Q96PV0 1343 aa29.01■■■□□ 2.23
TNFRSF4-201ENST00000379236 ALAS1P13196 640 aa29.01■■■□□ 2.23
TNFRSF4-201ENST00000379236 AKR1A1P14550 325 aa29.01■■■□□ 2.23
TNFRSF4-201ENST00000379236 GSPT1P15170 499 aaKnown RBP29.01■■■□□ 2.23
TNFRSF4-201ENST00000379236 CCDC178Q5BJE1 867 aa29.01■■■□□ 2.23
TNFRSF4-201ENST00000379236 DHX30Q7L2E3 1194 aaKnown RBP eCLIP29.01■■■□□ 2.23
TNFRSF4-201ENST00000379236 IQCA1Q86XH1 822 aa29.01■■■□□ 2.23
TNFRSF4-201ENST00000379236 RUFY2Q8WXA3 655 aa29.01■■■□□ 2.23
TNFRSF4-201ENST00000379236 AGBL1Q96MI9 1066 aa29.01■■■□□ 2.23
TNFRSF4-201ENST00000379236 RBM27Q9P2N5 1060 aaKnown RBP29.01■■■□□ 2.23
TNFRSF4-201ENST00000379236 FRMPD2Q68DX3 1309 aaPredicted RBP29■■■□□ 2.23
TNFRSF4-201ENST00000379236 DNAJC25-GNG10A0A024R161 153 aa29■■■□□ 2.23
TNFRSF4-201ENST00000379236 SNAP25P60880 206 aa29■■■□□ 2.23
TNFRSF4-201ENST00000379236 LRRC26Q2I0M4 334 aa29■■■□□ 2.23
TNFRSF4-201ENST00000379236 ZNF467Q7Z7K2 595 aaPredicted RBP29■■■□□ 2.23
TNFRSF4-201ENST00000379236 TRERF1Q96PN7 1200 aa29■■■□□ 2.23
TNFRSF4-201ENST00000379236 ZKSCAN3Q9BRR0 538 aa29■■■□□ 2.23
TNFRSF4-201ENST00000379236 GPCPD1Q9NPB8 672 aa29■■■□□ 2.23
TNFRSF4-201ENST00000379236 XPNPEP3Q9NQH7 507 aa29■■■□□ 2.23
TNFRSF4-201ENST00000379236 ZHX1Q9UKY1 873 aaPredicted RBP29■■■□□ 2.23
TNFRSF4-201ENST00000379236 RAD50Q92878 1312 aa28.99■■■□□ 2.23
TNFRSF4-201ENST00000379236 SYN1P17600 705 aa28.99■■■□□ 2.23
TNFRSF4-201ENST00000379236 CCPG1Q9ULG6 757 aa28.99■■■□□ 2.23
TNFRSF4-201ENST00000379236 DNAH12Q6ZR08 3092 aa28.98■■■□□ 2.23
TNFRSF4-201ENST00000379236 POTEB2H3BUK9 544 aa28.98■■■□□ 2.23
TNFRSF4-201ENST00000379236 KDM4AO75164 1064 aa28.98■■■□□ 2.23
TNFRSF4-201ENST00000379236 SLC16A2P36021 539 aa28.98■■■□□ 2.23
TNFRSF4-201ENST00000379236 ATN1P54259 1190 aaPredicted RBP28.98■■■□□ 2.23
TNFRSF4-201ENST00000379236 SYDE2Q5VT97 1194 aa28.98■■■□□ 2.23
TNFRSF4-201ENST00000379236 ZNF536O15090 1300 aa28.97■■■□□ 2.23
TNFRSF4-201ENST00000379236 TAL1P17542 331 aaPredicted RBP28.97■■■□□ 2.23
TNFRSF4-201ENST00000379236 TTBK2Q6IQ55 1244 aa28.97■■■□□ 2.23
TNFRSF4-201ENST00000379236 MAMDC4Q6UXC1 1216 aa28.97■■■□□ 2.23
TNFRSF4-201ENST00000379236 RNF180Q86T96 592 aa28.97■■■□□ 2.23
TNFRSF4-201ENST00000379236 KRT23Q9C075 422 aa28.97■■■□□ 2.23
TNFRSF4-201ENST00000379236 TRIOBPQ9H2D6 2365 aa28.97■■■□□ 2.23
TNFRSF4-201ENST00000379236 MYH6P13533 1939 aa28.96■■■□□ 2.23
TNFRSF4-201ENST00000379236 B4E1Z4 1266 aa28.96■■■□□ 2.23
TNFRSF4-201ENST00000379236 ZNF865P0CJ78 1059 aaPredicted RBP28.96■■■□□ 2.23
TNFRSF4-201ENST00000379236 PDHBP11177 359 aa28.96■■■□□ 2.23
TNFRSF4-201ENST00000379236 LRRC41Q15345 812 aa28.96■■■□□ 2.23
TNFRSF4-201ENST00000379236 DGKHQ86XP1 1220 aa28.96■■■□□ 2.23
TNFRSF4-201ENST00000379236 KAT14Q9H8E8 782 aa28.96■■■□□ 2.23
TNFRSF4-201ENST00000379236 CNNM2Q9H8M5 875 aa28.96■■■□□ 2.23
TNFRSF4-201ENST00000379236 FAM184BQ9ULE4 1060 aa28.96■■■□□ 2.23
TNFRSF4-201ENST00000379236 ICAM1P05362 532 aa28.95■■■□□ 2.22
TNFRSF4-201ENST00000379236 FXR1P51114 621 aaKnown RBP eCLIP28.95■■■□□ 2.22
TNFRSF4-201ENST00000379236 BTNL9Q6UXG8 535 aa28.95■■■□□ 2.22
TNFRSF4-201ENST00000379236 RANBP17Q9H2T7 1088 aaKnown RBP28.95■■■□□ 2.22
TNFRSF4-201ENST00000379236 A1CFQ9NQ94 594 aaKnown RBP28.95■■■□□ 2.22
TNFRSF4-201ENST00000379236 CDKN2AIPQ9NXV6 580 aaPredicted RBP28.95■■■□□ 2.22
TNFRSF4-201ENST00000379236 ARMCX2Q7L311 632 aa28.94■■■□□ 2.22
TNFRSF4-201ENST00000379236 ABHD16BQ9H3Z7 469 aa28.94■■■□□ 2.22
TNFRSF4-201ENST00000379236 PRKAG2Q9UGJ0 569 aa28.94■■■□□ 2.22
TNFRSF4-201ENST00000379236 SNAI1O95863 264 aaPredicted RBP28.93■■■□□ 2.22
TNFRSF4-201ENST00000379236 PGK1P00558 417 aa28.93■■■□□ 2.22
TNFRSF4-201ENST00000379236 ACVR2BQ13705 512 aa28.93■■■□□ 2.22
TNFRSF4-201ENST00000379236 NSMFQ6X4W1 530 aa28.93■■■□□ 2.22
TNFRSF4-201ENST00000379236 UBAC1Q9BSL1 405 aa28.93■■■□□ 2.22
TNFRSF4-201ENST00000379236 PNMA2Q9UL42 364 aa28.93■■■□□ 2.22
TNFRSF4-201ENST00000379236 ATP11BQ9Y2G3 1177 aa28.93■■■□□ 2.22
TNFRSF4-201ENST00000379236 A0A1W2PPC1 479 aa28.92■■■□□ 2.22
TNFRSF4-201ENST00000379236 ADCYAP1R1P41586 468 aa28.92■■■□□ 2.22
TNFRSF4-201ENST00000379236 RTP1P59025 263 aa28.92■■■□□ 2.22
TNFRSF4-201ENST00000379236 CNTN2Q02246 1040 aa28.92■■■□□ 2.22
TNFRSF4-201ENST00000379236 ZNF543Q08ER8 600 aa28.92■■■□□ 2.22
TNFRSF4-201ENST00000379236 GPATCH4Q5T3I0 446 aaKnown RBP28.92■■■□□ 2.22
TNFRSF4-201ENST00000379236 PNMA1Q8ND90 353 aa28.92■■■□□ 2.22
TNFRSF4-201ENST00000379236 FERMT2Q96AC1 680 aa28.92■■■□□ 2.22
TNFRSF4-201ENST00000379236 ZSCAN10Q96SZ4 725 aaPredicted RBP28.92■■■□□ 2.22
TNFRSF4-201ENST00000379236 ASB14A6NK59 587 aa28.91■■■□□ 2.22
TNFRSF4-201ENST00000379236 CHMLP26374 656 aa28.91■■■□□ 2.22
TNFRSF4-201ENST00000379236 TRDNQ13061 729 aa28.91■■■□□ 2.22
TNFRSF4-201ENST00000379236 MUM1L1Q5H9M0 696 aa28.91■■■□□ 2.22
TNFRSF4-201ENST00000379236 CCDC144CPQ8IYA2 1237 aa28.91■■■□□ 2.22
TNFRSF4-201ENST00000379236 FAM133AQ8N9E0 248 aa28.91■■■□□ 2.22
TNFRSF4-201ENST00000379236 LENG1Q96BZ8 264 aaPredicted RBP28.91■■■□□ 2.22
TNFRSF4-201ENST00000379236 IL25Q9H293 177 aa28.91■■■□□ 2.22
TNFRSF4-201ENST00000379236 PRO3102Q9H379 93 aa28.91■■■□□ 2.22
TNFRSF4-201ENST00000379236 LCTP09848 1927 aa28.9■■■□□ 2.22
TNFRSF4-201ENST00000379236 LRRC37A2A6NM11 1700 aa28.9■■■□□ 2.22
TNFRSF4-201ENST00000379236 SLC39A5Q6ZMH5 540 aa28.9■■■□□ 2.22
TNFRSF4-201ENST00000379236 FGD4Q96M96 766 aa28.9■■■□□ 2.22
TNFRSF4-201ENST00000379236 GDF15Q99988 308 aa28.9■■■□□ 2.22
TNFRSF4-201ENST00000379236 SPC25Q9HBM1 224 aa28.9■■■□□ 2.22
TNFRSF4-201ENST00000379236 ZSWIM5Q9P217 1185 aa28.9■■■□□ 2.22
TNFRSF4-201ENST00000379236 TNKSO95271 1327 aa28.9■■■□□ 2.22
TNFRSF4-201ENST00000379236 SNHG28P0DPA3 235 aa28.89■■■□□ 2.22
TNFRSF4-201ENST00000379236 MAGEA10P43363 369 aaPredicted RBP28.89■■■□□ 2.22
TNFRSF4-201ENST00000379236 CYP39A1Q9NYL5 469 aa28.89■■■□□ 2.22
TNFRSF4-201ENST00000379236 SYNRGQ9UMZ2 1314 aa28.89■■■□□ 2.21
TNFRSF4-201ENST00000379236 GOLGA8HP0CJ92 632 aa28.88■■■□□ 2.21
TNFRSF4-201ENST00000379236 BMP8BP34820 402 aa28.88■■■□□ 2.21
TNFRSF4-201ENST00000379236 CCDC144BQ3MJ40 725 aa28.88■■■□□ 2.21
TNFRSF4-201ENST00000379236 LBHD1Q9BQE6 289 aaPredicted RBP28.88■■■□□ 2.21
TNFRSF4-201ENST00000379236 PHF24Q9UPV7 400 aa28.88■■■□□ 2.21
TNFRSF4-201ENST00000379236 U3KPZ7 1027 aaPredicted RBP28.88■■■□□ 2.21
TNFRSF4-201ENST00000379236 DUSP11O75319 330 aaKnown RBP28.87■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms