RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 ELP1O95163 1332 aa21.25■□□□□ 0.99
PDLIM4-202ENST00000379018 GSG1L2A8MUP6 293 aa21.24■□□□□ 0.99
PDLIM4-202ENST00000379018 ARVCFO00192 962 aa21.24■□□□□ 0.99
PDLIM4-202ENST00000379018 TLR3O15455 904 aaKnown RBP21.24■□□□□ 0.99
PDLIM4-202ENST00000379018 APPP05067 770 aa21.24■□□□□ 0.99
PDLIM4-202ENST00000379018 CST5P28325 142 aaPredicted RBP21.24■□□□□ 0.99
PDLIM4-202ENST00000379018 TDO2P48775 406 aa21.24■□□□□ 0.99
PDLIM4-202ENST00000379018 ZNF365Q70YC5 407 aa21.24■□□□□ 0.99
PDLIM4-202ENST00000379018 C16orf59Q7L2K0 433 aa21.24■□□□□ 0.99
PDLIM4-202ENST00000379018 CCDC144CPQ8IYA2 1237 aa21.24■□□□□ 0.99
PDLIM4-202ENST00000379018 TMEM199Q8N511 208 aa21.24■□□□□ 0.99
PDLIM4-202ENST00000379018 FGD4Q96M96 766 aa21.24■□□□□ 0.99
PDLIM4-202ENST00000379018 LRRCC1Q9C099 1032 aa21.24■□□□□ 0.99
PDLIM4-202ENST00000379018 ABHD16BQ9H3Z7 469 aa21.24■□□□□ 0.99
PDLIM4-202ENST00000379018 CYP2C18P33260 490 aa21.23■□□□□ 0.99
PDLIM4-202ENST00000379018 CNTN2Q02246 1040 aa21.23■□□□□ 0.99
PDLIM4-202ENST00000379018 CCDC85BQ15834 202 aaPredicted RBP21.23■□□□□ 0.99
PDLIM4-202ENST00000379018 SBK1Q52WX2 424 aa21.23■□□□□ 0.99
PDLIM4-202ENST00000379018 TSHZ3Q63HK5 1081 aa21.23■□□□□ 0.99
PDLIM4-202ENST00000379018 ZNF467Q7Z7K2 595 aaPredicted RBP21.23■□□□□ 0.99
PDLIM4-202ENST00000379018 ZNF444Q8N0Y2 327 aaPredicted RBP21.23■□□□□ 0.99
PDLIM4-202ENST00000379018 CEP95Q96GE4 821 aa21.23■□□□□ 0.99
PDLIM4-202ENST00000379018 SLC38A10Q9HBR0 1119 aa21.23■□□□□ 0.99
PDLIM4-202ENST00000379018 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.22■□□□□ 0.99
PDLIM4-202ENST00000379018 IGFBP4P22692 258 aa21.22■□□□□ 0.99
PDLIM4-202ENST00000379018 CDK7P50613 346 aa21.22■□□□□ 0.99
PDLIM4-202ENST00000379018 GJA9P57773 515 aa21.22■□□□□ 0.99
PDLIM4-202ENST00000379018 IKQ13123 557 aaPredicted RBP21.22■□□□□ 0.99
PDLIM4-202ENST00000379018 PSRC1Q6PGN9 363 aaPredicted RBP21.22■□□□□ 0.99
PDLIM4-202ENST00000379018 FAM126BQ8IXS8 530 aa21.22■□□□□ 0.99
PDLIM4-202ENST00000379018 OSBP2Q969R2 916 aa21.22■□□□□ 0.99
PDLIM4-202ENST00000379018 UPF3AQ9H1J1 476 aaKnown RBP21.22■□□□□ 0.99
PDLIM4-202ENST00000379018 EPB41L4AQ9HCS5 686 aaPredicted RBP21.22■□□□□ 0.99
PDLIM4-202ENST00000379018 FBXO40Q9UH90 709 aa21.22■□□□□ 0.99
PDLIM4-202ENST00000379018 FEM1BQ9UK73 627 aa21.22■□□□□ 0.99
PDLIM4-202ENST00000379018 TNFRSF10AO00220 468 aa21.21■□□□□ 0.99
PDLIM4-202ENST00000379018 ATP2A1O14983 1001 aa21.21■□□□□ 0.99
PDLIM4-202ENST00000379018 PTGS1P23219 599 aa21.21■□□□□ 0.99
PDLIM4-202ENST00000379018 CHST13Q8NET6 341 aa21.21■□□□□ 0.99
PDLIM4-202ENST00000379018 DDX49Q9Y6V7 483 aaKnown RBP21.21■□□□□ 0.99
PDLIM4-202ENST00000379018 GPAA1O43292 621 aa21.2■□□□□ 0.98
PDLIM4-202ENST00000379018 TNFAIP2Q03169 654 aa21.2■□□□□ 0.98
PDLIM4-202ENST00000379018 SLFN13Q68D06 897 aa21.2■□□□□ 0.98
PDLIM4-202ENST00000379018 CXCL17Q6UXB2 119 aa21.2■□□□□ 0.98
PDLIM4-202ENST00000379018 APPBP2Q92624 585 aa21.2■□□□□ 0.98
PDLIM4-202ENST00000379018 NKX2-4Q9H2Z4 354 aa21.2■□□□□ 0.98
PDLIM4-202ENST00000379018 ECHDC1Q9NTX5 307 aa21.2■□□□□ 0.98
PDLIM4-202ENST00000379018 MSRAQ9UJ68 235 aa21.2■□□□□ 0.98
PDLIM4-202ENST00000379018 GBF1Q92538 1859 aa21.2■□□□□ 0.98
PDLIM4-202ENST00000379018 IGKV6D-41A0A0C4DH26 115 aa21.19■□□□□ 0.98
PDLIM4-202ENST00000379018 TMEM232C9JQI7 657 aa21.19■□□□□ 0.98
PDLIM4-202ENST00000379018 M0R2C6 588 aa21.19■□□□□ 0.98
PDLIM4-202ENST00000379018 TTLL1O95922 423 aa21.19■□□□□ 0.98
PDLIM4-202ENST00000379018 BMP3P12645 472 aa21.19■□□□□ 0.98
PDLIM4-202ENST00000379018 MIER1Q8N108 512 aa21.19■□□□□ 0.98
PDLIM4-202ENST00000379018 ACAD9Q9H845 621 aa21.19■□□□□ 0.98
PDLIM4-202ENST00000379018 IL23AQ9NPF7 189 aa21.19■□□□□ 0.98
PDLIM4-202ENST00000379018 MTMR4Q9NYA4 1195 aa21.19■□□□□ 0.98
PDLIM4-202ENST00000379018 CXXC1Q9P0U4 656 aaPredicted RBP21.19■□□□□ 0.98
PDLIM4-202ENST00000379018 THEGQ9P2T0 379 aa21.19■□□□□ 0.98
PDLIM4-202ENST00000379018 UMODL1Q5DID0 1318 aa21.19■□□□□ 0.98
PDLIM4-202ENST00000379018 CTAGE5O15320 804 aa21.18■□□□□ 0.98
PDLIM4-202ENST00000379018 RNF113AO15541 343 aaKnown RBP21.18■□□□□ 0.98
PDLIM4-202ENST00000379018 TSPY3P0CV98 308 aa21.18■□□□□ 0.98
PDLIM4-202ENST00000379018 TSPY8P0CW00 308 aa21.18■□□□□ 0.98
PDLIM4-202ENST00000379018 CCL23P55773 120 aa21.18■□□□□ 0.98
PDLIM4-202ENST00000379018 SNAP25P60880 206 aa21.18■□□□□ 0.98
PDLIM4-202ENST00000379018 GIMAP6Q6P9H5 292 aa21.18■□□□□ 0.98
PDLIM4-202ENST00000379018 EEPD1Q7L9B9 569 aa21.18■□□□□ 0.98
PDLIM4-202ENST00000379018 OTOP2Q7RTS6 562 aa21.18■□□□□ 0.98
PDLIM4-202ENST00000379018 TLK2Q86UE8 772 aa21.18■□□□□ 0.98
PDLIM4-202ENST00000379018 MICALL1Q8N3F8 863 aa21.18■□□□□ 0.98
PDLIM4-202ENST00000379018 KBTBD3Q8NAB2 608 aa21.18■□□□□ 0.98
PDLIM4-202ENST00000379018 AGBL1Q96MI9 1066 aa21.18■□□□□ 0.98
PDLIM4-202ENST00000379018 HIPK3Q9H422 1215 aa21.18■□□□□ 0.98
PDLIM4-202ENST00000379018 ZNF287Q9HBT7 754 aa21.18■□□□□ 0.98
PDLIM4-202ENST00000379018 RNF146Q9NTX7 359 aa21.18■□□□□ 0.98
PDLIM4-202ENST00000379018 MTMR7Q9Y216 660 aa21.18■□□□□ 0.98
PDLIM4-202ENST00000379018 ALAS1P13196 640 aa21.17■□□□□ 0.98
PDLIM4-202ENST00000379018 COL9A1P20849 921 aa21.17■□□□□ 0.98
PDLIM4-202ENST00000379018 ADGRE1Q14246 886 aa21.17■□□□□ 0.98
PDLIM4-202ENST00000379018 RAB30Q15771 203 aa21.17■□□□□ 0.98
PDLIM4-202ENST00000379018 RASIP1Q5U651 963 aa21.17■□□□□ 0.98
PDLIM4-202ENST00000379018 KATNBL1Q9H079 304 aa21.17■□□□□ 0.98
PDLIM4-202ENST00000379018 MTIF3Q9H2K0 278 aaKnown RBP21.17■□□□□ 0.98
PDLIM4-202ENST00000379018 CHMP4BQ9H444 224 aaKnown RBP21.17■□□□□ 0.98
PDLIM4-202ENST00000379018 A1CFQ9NQ94 594 aaKnown RBP21.17■□□□□ 0.98
PDLIM4-202ENST00000379018 ASTN1O14525 1302 aa21.17■□□□□ 0.98
PDLIM4-202ENST00000379018 FGBP02675 491 aa21.16■□□□□ 0.98
PDLIM4-202ENST00000379018 OAZ1P54368 228 aa21.16■□□□□ 0.98
PDLIM4-202ENST00000379018 FSCN1Q16658 493 aaKnown RBP21.16■□□□□ 0.98
PDLIM4-202ENST00000379018 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.16■□□□□ 0.98
PDLIM4-202ENST00000379018 GMCL1P1Q8NEA9 526 aa21.16■□□□□ 0.98
PDLIM4-202ENST00000379018 IL27Q8NEV9 243 aa21.16■□□□□ 0.98
PDLIM4-202ENST00000379018 GPATCH3Q96I76 525 aa21.16■□□□□ 0.98
PDLIM4-202ENST00000379018 AP5M1Q9H0R1 490 aa21.16■□□□□ 0.98
PDLIM4-202ENST00000379018 RAPGEFL1Q9UHV5 662 aa21.16■□□□□ 0.98
PDLIM4-202ENST00000379018 SOWAHBA6NEL2 793 aa21.15■□□□□ 0.98
PDLIM4-202ENST00000379018 DYNC1LI2O43237 492 aaPredicted RBP21.15■□□□□ 0.98
PDLIM4-202ENST00000379018 CD4P01730 458 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms