RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 LONRF3Q496Y0 759 aa19.8■□□□□ 0.76
THUMPD2-201ENST00000378727 PPP1R18Q6NYC8 613 aa19.8■□□□□ 0.76
THUMPD2-201ENST00000378727 FAM200AQ8TCP9 573 aa19.8■□□□□ 0.76
THUMPD2-201ENST00000378727 ARHGEF10LQ9HCE6 1279 aa19.8■□□□□ 0.76
THUMPD2-201ENST00000378727 FAM13BQ9NYF5 915 aa19.8■□□□□ 0.76
THUMPD2-201ENST00000378727 KIAA1468Q9P260 1216 aa19.8■□□□□ 0.76
THUMPD2-201ENST00000378727 BIN2Q9UBW5 565 aaPredicted RBP19.8■□□□□ 0.76
THUMPD2-201ENST00000378727 TMX2Q9Y320 296 aa19.8■□□□□ 0.76
THUMPD2-201ENST00000378727 A0A087WWV3 80 aa19.79■□□□□ 0.76
THUMPD2-201ENST00000378727 PHF20L1A8MW92 1017 aa19.79■□□□□ 0.76
THUMPD2-201ENST00000378727 LMNB1P20700 586 aa19.79■□□□□ 0.76
THUMPD2-201ENST00000378727 CCDC173Q0VFZ6 552 aa19.79■□□□□ 0.76
THUMPD2-201ENST00000378727 IL17AQ16552 155 aa19.79■□□□□ 0.76
THUMPD2-201ENST00000378727 QRICH1Q2TAL8 776 aa19.79■□□□□ 0.76
THUMPD2-201ENST00000378727 REXO1Q8N1G1 1221 aaKnown RBP19.79■□□□□ 0.76
THUMPD2-201ENST00000378727 ANP32BQ92688 251 aaKnown RBP19.79■□□□□ 0.76
THUMPD2-201ENST00000378727 TMEM260Q9NX78 707 aa19.79■□□□□ 0.76
THUMPD2-201ENST00000378727 BMP3P12645 472 aa19.79■□□□□ 0.76
THUMPD2-201ENST00000378727 ADCY7P51828 1080 aa19.79■□□□□ 0.76
THUMPD2-201ENST00000378727 NONOQ15233 471 aaKnown RBP eCLIP19.79■□□□□ 0.76
THUMPD2-201ENST00000378727 KRBA2Q6ZNG9 492 aa19.79■□□□□ 0.76
THUMPD2-201ENST00000378727 SPICE1Q8N0Z3 855 aa19.79■□□□□ 0.76
THUMPD2-201ENST00000378727 EPSTI1Q96J88 318 aa19.79■□□□□ 0.76
THUMPD2-201ENST00000378727 DNAJC25Q9H1X3 360 aa19.79■□□□□ 0.76
THUMPD2-201ENST00000378727 VWA3AA6NCI4 1184 aa19.78■□□□□ 0.76
THUMPD2-201ENST00000378727 CDC37Q16543 378 aaPredicted RBP19.78■□□□□ 0.76
THUMPD2-201ENST00000378727 STX1AQ16623 288 aa19.78■□□□□ 0.76
THUMPD2-201ENST00000378727 JAKMIP3Q5VZ66 844 aa19.78■□□□□ 0.76
THUMPD2-201ENST00000378727 CBX8Q9HC52 389 aa19.78■□□□□ 0.76
THUMPD2-201ENST00000378727 RIC8AQ9NPQ8 531 aa19.78■□□□□ 0.76
THUMPD2-201ENST00000378727 TMEM232C9JQI7 657 aa19.77■□□□□ 0.76
THUMPD2-201ENST00000378727 BTNL9Q6UXG8 535 aa19.77■□□□□ 0.76
THUMPD2-201ENST00000378727 PDLIM2Q96JY6 352 aa19.77■□□□□ 0.76
THUMPD2-201ENST00000378727 GPRC5DQ9NZD1 345 aa19.77■□□□□ 0.76
THUMPD2-201ENST00000378727 H7C1D1 291 aa19.77■□□□□ 0.75
THUMPD2-201ENST00000378727 POLR2DO15514 142 aaKnown RBP19.77■□□□□ 0.75
THUMPD2-201ENST00000378727 ARL6IP4Q66PJ3 421 aaKnown RBP19.77■□□□□ 0.75
THUMPD2-201ENST00000378727 C11orf57Q6ZUT1 292 aaPredicted RBP19.77■□□□□ 0.75
THUMPD2-201ENST00000378727 SYMPKQ92797 1274 aaKnown RBP19.77■□□□□ 0.75
THUMPD2-201ENST00000378727 DEFB129Q9H1M3 183 aa19.77■□□□□ 0.75
THUMPD2-201ENST00000378727 TMEM60Q9H2L4 133 aa19.77■□□□□ 0.75
THUMPD2-201ENST00000378727 A0A087X0B3 334 aa19.76■□□□□ 0.75
THUMPD2-201ENST00000378727 SYDE2Q5VT97 1194 aa19.76■□□□□ 0.75
THUMPD2-201ENST00000378727 CCDC84Q86UT8 332 aaPredicted RBP19.76■□□□□ 0.75
THUMPD2-201ENST00000378727 LUZP1Q86V48 1076 aa19.76■□□□□ 0.75
THUMPD2-201ENST00000378727 GPC2Q8N158 579 aa19.76■□□□□ 0.75
THUMPD2-201ENST00000378727 CNNM3Q8NE01 707 aa19.76■□□□□ 0.75
THUMPD2-201ENST00000378727 TRPM4Q8TD43 1214 aa19.76■□□□□ 0.75
THUMPD2-201ENST00000378727 TBCKQ8TEA7 893 aa19.76■□□□□ 0.75
THUMPD2-201ENST00000378727 GLIS2Q9BZE0 524 aaPredicted RBP19.76■□□□□ 0.75
THUMPD2-201ENST00000378727 ASNSP08243 561 aa19.75■□□□□ 0.75
THUMPD2-201ENST00000378727 CLK2P49760 499 aaKnown RBP19.75■□□□□ 0.75
THUMPD2-201ENST00000378727 ZNF165P49910 485 aa19.75■□□□□ 0.75
THUMPD2-201ENST00000378727 SNAP25P60880 206 aa19.75■□□□□ 0.75
THUMPD2-201ENST00000378727 PDILTQ8N807 584 aa19.75■□□□□ 0.75
THUMPD2-201ENST00000378727 SYT17Q9BSW7 474 aa19.75■□□□□ 0.75
THUMPD2-201ENST00000378727 GOPCQ9HD26 462 aa19.75■□□□□ 0.75
THUMPD2-201ENST00000378727 FOXN1O15353 648 aa19.75■□□□□ 0.75
THUMPD2-201ENST00000378727 MDM2Q00987 491 aaPredicted RBP19.75■□□□□ 0.75
THUMPD2-201ENST00000378727 PNOCQ13519 176 aa19.75■□□□□ 0.75
THUMPD2-201ENST00000378727 UBE2SQ16763 222 aa19.75■□□□□ 0.75
THUMPD2-201ENST00000378727 NEK8Q86SG6 692 aa19.75■□□□□ 0.75
THUMPD2-201ENST00000378727 ELOA2Q8IYF1 753 aaPredicted RBP19.75■□□□□ 0.75
THUMPD2-201ENST00000378727 USP25Q9UHP3 1055 aa19.75■□□□□ 0.75
THUMPD2-201ENST00000378727 SERTAD1Q9UHV2 236 aa19.75■□□□□ 0.75
THUMPD2-201ENST00000378727 TUBE1Q9UJT0 475 aa19.75■□□□□ 0.75
THUMPD2-201ENST00000378727 ACTN4O43707 911 aaKnown RBP19.74■□□□□ 0.75
THUMPD2-201ENST00000378727 EDIL3O43854 480 aa19.74■□□□□ 0.75
THUMPD2-201ENST00000378727 LETM2Q2VYF4 491 aa19.74■□□□□ 0.75
THUMPD2-201ENST00000378727 NBPF12Q5TAG4 269 aaPredicted RBP19.74■□□□□ 0.75
THUMPD2-201ENST00000378727 CUL5Q93034 780 aa19.74■□□□□ 0.75
THUMPD2-201ENST00000378727 VCPKMTQ9H867 229 aa19.74■□□□□ 0.75
THUMPD2-201ENST00000378727 ANO10Q9NW15 660 aa19.74■□□□□ 0.75
THUMPD2-201ENST00000378727 PCDHA1Q9Y5I3 950 aa19.74■□□□□ 0.75
THUMPD2-201ENST00000378727 CAVIN2O95810 425 aa19.74■□□□□ 0.75
THUMPD2-201ENST00000378727 IKQ13123 557 aaPredicted RBP19.74■□□□□ 0.75
THUMPD2-201ENST00000378727 FAM83BQ5T0W9 1011 aa19.74■□□□□ 0.75
THUMPD2-201ENST00000378727 ANGEL2Q5VTE6 544 aaKnown RBP19.74■□□□□ 0.75
THUMPD2-201ENST00000378727 PSTPIP2Q9H939 334 aa19.74■□□□□ 0.75
THUMPD2-201ENST00000378727 PRR12Q9ULL5 1215 aa19.74■□□□□ 0.75
THUMPD2-201ENST00000378727 CCNT1O60563 726 aaKnown RBP19.73■□□□□ 0.75
THUMPD2-201ENST00000378727 EPS15P42566 896 aa19.73■□□□□ 0.75
THUMPD2-201ENST00000378727 ZYXQ15942 572 aaKnown RBP19.73■□□□□ 0.75
THUMPD2-201ENST00000378727 BIN1O00499 593 aa19.72■□□□□ 0.75
THUMPD2-201ENST00000378727 AP5Z1O43299 807 aa19.72■□□□□ 0.75
THUMPD2-201ENST00000378727 YBX3P16989 372 aaKnown RBP eCLIP19.72■□□□□ 0.75
THUMPD2-201ENST00000378727 STAT2P52630 851 aa19.72■□□□□ 0.75
THUMPD2-201ENST00000378727 MRPL12P52815 198 aaKnown RBP19.72■□□□□ 0.75
THUMPD2-201ENST00000378727 HIRAP54198 1017 aaPredicted RBP19.72■□□□□ 0.75
THUMPD2-201ENST00000378727 IQCB1Q15051 598 aa19.72■□□□□ 0.75
THUMPD2-201ENST00000378727 DPCR1Q3MIW9 517 aa19.72■□□□□ 0.75
THUMPD2-201ENST00000378727 AMNQ9BXJ7 453 aa19.72■□□□□ 0.75
THUMPD2-201ENST00000378727 MYH7BA7E2Y1 1941 aa19.72■□□□□ 0.75
THUMPD2-201ENST00000378727 LAD1O00515 517 aa19.72■□□□□ 0.75
THUMPD2-201ENST00000378727 LONP1P36776 959 aaKnown RBP19.72■□□□□ 0.75
THUMPD2-201ENST00000378727 SH2D4AQ9H788 454 aa19.72■□□□□ 0.75
THUMPD2-201ENST00000378727 SMCHD1A6NHR9 2005 aa19.72■□□□□ 0.75
THUMPD2-201ENST00000378727 FBXO11Q86XK2 927 aa19.71■□□□□ 0.75
THUMPD2-201ENST00000378727 DHX58Q96C10 678 aa19.71■□□□□ 0.75
THUMPD2-201ENST00000378727 NEMFO60524 1076 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms