RNA–Protein interactions for RNA: ENST00000378676.1

SHROOM1-202, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-202ENST00000378676 ZNF569Q5MCW4 686 aa21.98■■□□□ 1.11
SHROOM1-202ENST00000378676 CCDC148Q8NFR7 591 aa21.98■■□□□ 1.11
SHROOM1-202ENST00000378676 GRAPLQ8TC17 118 aaPredicted RBP21.98■■□□□ 1.11
SHROOM1-202ENST00000378676 NUP88Q99567 741 aaPredicted RBP21.98■■□□□ 1.11
SHROOM1-202ENST00000378676 ZSWIM4Q9H7M6 989 aa21.98■■□□□ 1.11
SHROOM1-202ENST00000378676 TCP11L1Q9NUJ3 509 aa21.98■■□□□ 1.11
SHROOM1-202ENST00000378676 KIF5CO60282 957 aa21.98■■□□□ 1.11
SHROOM1-202ENST00000378676 PARP1P09874 1014 aaKnown RBP21.98■■□□□ 1.11
SHROOM1-202ENST00000378676 CC2D1AQ6P1N0 951 aaPredicted RBP21.98■■□□□ 1.11
SHROOM1-202ENST00000378676 RASSF8Q8NHQ8 419 aa21.98■■□□□ 1.11
SHROOM1-202ENST00000378676 GOLGA1Q92805 767 aa21.98■■□□□ 1.11
SHROOM1-202ENST00000378676 RTFDC1Q9BY42 306 aaPredicted RBP21.98■■□□□ 1.11
SHROOM1-202ENST00000378676 FOCADQ5VW36 1801 aa21.98■■□□□ 1.11
SHROOM1-202ENST00000378676 SASH3O75995 380 aa21.97■■□□□ 1.11
SHROOM1-202ENST00000378676 TMTC1Q8IUR5 882 aa21.97■■□□□ 1.11
SHROOM1-202ENST00000378676 ZNF444Q8N0Y2 327 aaPredicted RBP21.97■■□□□ 1.11
SHROOM1-202ENST00000378676 RABGGTAQ92696 567 aa21.97■■□□□ 1.11
SHROOM1-202ENST00000378676 THSD7AQ9UPZ6 1657 aa21.97■■□□□ 1.11
SHROOM1-202ENST00000378676 FLT1P17948 1338 aa21.97■■□□□ 1.11
SHROOM1-202ENST00000378676 AFF2P51816 1311 aa21.97■■□□□ 1.11
SHROOM1-202ENST00000378676 PPP4CP60510 307 aa21.97■■□□□ 1.11
SHROOM1-202ENST00000378676 SLC35F6Q8N357 371 aa21.97■■□□□ 1.11
SHROOM1-202ENST00000378676 ANKRD20A12PQ8NF67 263 aa21.97■■□□□ 1.11
SHROOM1-202ENST00000378676 PARD6BQ9BYG5 372 aa21.97■■□□□ 1.11
SHROOM1-202ENST00000378676 LEMD3Q9Y2U8 911 aa21.97■■□□□ 1.11
SHROOM1-202ENST00000378676 TBC1D8O95759 1140 aa21.96■■□□□ 1.11
SHROOM1-202ENST00000378676 BAG3O95817 575 aa21.96■■□□□ 1.11
SHROOM1-202ENST00000378676 ARHGAP25P42331 645 aa21.96■■□□□ 1.11
SHROOM1-202ENST00000378676 GSTO1P78417 241 aa21.96■■□□□ 1.11
SHROOM1-202ENST00000378676 UBXN1Q04323 297 aa21.96■■□□□ 1.11
SHROOM1-202ENST00000378676 CCSER1Q9C0I3 900 aa21.96■■□□□ 1.11
SHROOM1-202ENST00000378676 TFRCP02786 760 aaKnown RBP21.96■■□□□ 1.11
SHROOM1-202ENST00000378676 KRT9P35527 623 aa21.96■■□□□ 1.11
SHROOM1-202ENST00000378676 TRIM14Q14142 442 aa21.96■■□□□ 1.11
SHROOM1-202ENST00000378676 CCDC178Q5BJE1 867 aa21.96■■□□□ 1.11
SHROOM1-202ENST00000378676 AMOTL1Q8IY63 956 aa21.96■■□□□ 1.11
SHROOM1-202ENST00000378676 GJD4Q96KN9 370 aaPredicted RBP21.96■■□□□ 1.11
SHROOM1-202ENST00000378676 KBTBD4Q9NVX7 518 aa21.96■■□□□ 1.11
SHROOM1-202ENST00000378676 TTF2Q9UNY4 1162 aaKnown RBP21.96■■□□□ 1.11
SHROOM1-202ENST00000378676 H7C1D1 291 aa21.95■■□□□ 1.1
SHROOM1-202ENST00000378676 UBA7P41226 1012 aa21.95■■□□□ 1.1
SHROOM1-202ENST00000378676 NT5C2P49902 561 aa21.95■■□□□ 1.1
SHROOM1-202ENST00000378676 KCNB1Q14721 858 aa21.95■■□□□ 1.1
SHROOM1-202ENST00000378676 CYP26C1Q6V0L0 522 aa21.95■■□□□ 1.1
SHROOM1-202ENST00000378676 PUF60Q9UHX1 559 aaKnown RBP21.95■■□□□ 1.1
SHROOM1-202ENST00000378676 KLRF2D3W0D1 207 aa21.95■■□□□ 1.1
SHROOM1-202ENST00000378676 BTDP43251 543 aa21.95■■□□□ 1.1
SHROOM1-202ENST00000378676 GALNT17Q6IS24 598 aa21.95■■□□□ 1.1
SHROOM1-202ENST00000378676 ZNF804AQ7Z570 1209 aa21.95■■□□□ 1.1
SHROOM1-202ENST00000378676 SRGAP1Q7Z6B7 1085 aa21.95■■□□□ 1.1
SHROOM1-202ENST00000378676 CHP1Q99653 195 aa21.95■■□□□ 1.1
SHROOM1-202ENST00000378676 SLF1Q9BQI6 1058 aa21.95■■□□□ 1.1
SHROOM1-202ENST00000378676 CDC23Q9UJX2 597 aa21.95■■□□□ 1.1
SHROOM1-202ENST00000378676 CHMP4BP1P59074 171 aa21.94■■□□□ 1.1
SHROOM1-202ENST00000378676 LGALS16A8MUM7 142 aa21.94■■□□□ 1.1
SHROOM1-202ENST00000378676 RHOBTB3O94955 611 aa21.94■■□□□ 1.1
SHROOM1-202ENST00000378676 PLCG1P19174 1290 aa21.94■■□□□ 1.1
SHROOM1-202ENST00000378676 GIMAP8Q8ND71 665 aaPredicted RBP21.94■■□□□ 1.1
SHROOM1-202ENST00000378676 REXO2Q9Y3B8 237 aaKnown RBP21.94■■□□□ 1.1
SHROOM1-202ENST00000378676 TTC26A0AVF1 554 aa21.93■■□□□ 1.1
SHROOM1-202ENST00000378676 PRPHP41219 470 aa21.93■■□□□ 1.1
SHROOM1-202ENST00000378676 CDK8P49336 464 aa21.93■■□□□ 1.1
SHROOM1-202ENST00000378676 NAPAP54920 295 aa21.93■■□□□ 1.1
SHROOM1-202ENST00000378676 GPSM2P81274 684 aa21.93■■□□□ 1.1
SHROOM1-202ENST00000378676 MB21D1Q8N884 522 aa21.93■■□□□ 1.1
SHROOM1-202ENST00000378676 TRIM47Q96LD4 638 aa21.93■■□□□ 1.1
SHROOM1-202ENST00000378676 EYA3Q99504 573 aa21.93■■□□□ 1.1
SHROOM1-202ENST00000378676 SPZ1Q9BXG8 430 aa21.93■■□□□ 1.1
SHROOM1-202ENST00000378676 ZMYND12Q9H0C1 365 aa21.93■■□□□ 1.1
SHROOM1-202ENST00000378676 KIF4BQ2VIQ3 1234 aa21.92■■□□□ 1.1
SHROOM1-202ENST00000378676 TTI2Q6NXR4 508 aa21.92■■□□□ 1.1
SHROOM1-202ENST00000378676 ZNF507Q8TCN5 953 aa21.92■■□□□ 1.1
SHROOM1-202ENST00000378676 TXNRD1Q16881 649 aa21.92■■□□□ 1.1
SHROOM1-202ENST00000378676 USP17L2Q6R6M4 530 aa21.92■■□□□ 1.1
SHROOM1-202ENST00000378676 C16orf86Q6ZW13 317 aa21.92■■□□□ 1.1
SHROOM1-202ENST00000378676 CABP7Q86V35 215 aa21.92■■□□□ 1.1
SHROOM1-202ENST00000378676 TRPC5Q9UL62 973 aaPredicted RBP21.92■■□□□ 1.1
SHROOM1-202ENST00000378676 CTAGE9A4FU28 777 aa21.91■■□□□ 1.1
SHROOM1-202ENST00000378676 LAD1O00515 517 aa21.91■■□□□ 1.1
SHROOM1-202ENST00000378676 LDHCP07864 332 aa21.91■■□□□ 1.1
SHROOM1-202ENST00000378676 OR52Z1P0C646 297 aa21.91■■□□□ 1.1
SHROOM1-202ENST00000378676 LETM2Q2VYF4 491 aa21.91■■□□□ 1.1
SHROOM1-202ENST00000378676 CNBD1Q8NA66 436 aa21.91■■□□□ 1.1
SHROOM1-202ENST00000378676 DUSP9Q99956 384 aaKnown RBP21.91■■□□□ 1.1
SHROOM1-202ENST00000378676 THAP9Q9H5L6 903 aa21.91■■□□□ 1.1
SHROOM1-202ENST00000378676 ANKZF1Q9H8Y5 726 aa21.91■■□□□ 1.1
SHROOM1-202ENST00000378676 EEF1GP26641 437 aaKnown RBP21.91■■□□□ 1.1
SHROOM1-202ENST00000378676 RFC4P35249 363 aa21.91■■□□□ 1.1
SHROOM1-202ENST00000378676 TEX11Q8IYF3 940 aa21.91■■□□□ 1.1
SHROOM1-202ENST00000378676 LZTS2Q9BRK4 669 aa21.91■■□□□ 1.1
SHROOM1-202ENST00000378676 UBXN6Q9BZV1 441 aa21.91■■□□□ 1.1
SHROOM1-202ENST00000378676 TRIM10Q9UDY6 481 aa21.91■■□□□ 1.1
SHROOM1-202ENST00000378676 PSMA7O14818 248 aa21.9■■□□□ 1.1
SHROOM1-202ENST00000378676 ATP8B1O43520 1251 aa21.9■■□□□ 1.1
SHROOM1-202ENST00000378676 CCNT1O60563 726 aaKnown RBP21.9■■□□□ 1.1
SHROOM1-202ENST00000378676 MYL1P05976 194 aa21.9■■□□□ 1.1
SHROOM1-202ENST00000378676 SMCO2A6NFE2 343 aa21.9■■□□□ 1.1
SHROOM1-202ENST00000378676 PES1O00541 588 aaKnown RBP21.9■■□□□ 1.1
SHROOM1-202ENST00000378676 NONOQ15233 471 aaKnown RBP eCLIP21.9■■□□□ 1.1
SHROOM1-202ENST00000378676 C15orf52Q6ZUT6 534 aaKnown RBP21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms