RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 PNMA6FA0A0J9YX94 578 aa9.48□□□□□ -0.89
CRNKL1-202ENST00000377340 FAM170AA1A519 330 aa9.48□□□□□ -0.89
CRNKL1-202ENST00000377340 WNT10BO00744 389 aa9.48□□□□□ -0.89
CRNKL1-202ENST00000377340 OR52Z1P0C646 297 aa9.48□□□□□ -0.89
CRNKL1-202ENST00000377340 DESP17661 470 aa9.48□□□□□ -0.89
CRNKL1-202ENST00000377340 CYP2B6P20813 491 aa9.48□□□□□ -0.89
CRNKL1-202ENST00000377340 TAF12Q16514 161 aa9.48□□□□□ -0.89
CRNKL1-202ENST00000377340 TEKT3Q9BXF9 490 aa9.48□□□□□ -0.89
CRNKL1-202ENST00000377340 SYNCQ9H7C4 482 aa9.48□□□□□ -0.89
CRNKL1-202ENST00000377340 MKRN1Q9UHC7 482 aaKnown RBP9.48□□□□□ -0.89
CRNKL1-202ENST00000377340 PNMA2Q9UL42 364 aa9.48□□□□□ -0.89
CRNKL1-202ENST00000377340 BCL9LQ86UU0 1499 aa9.48□□□□□ -0.89
CRNKL1-202ENST00000377340 LRRIQ4A6NIV6 560 aa9.48□□□□□ -0.89
CRNKL1-202ENST00000377340 GCNT3O95395 438 aa9.48□□□□□ -0.89
CRNKL1-202ENST00000377340 NDUFB10O96000 172 aa9.48□□□□□ -0.89
CRNKL1-202ENST00000377340 CASP7P55210 303 aa9.48□□□□□ -0.89
CRNKL1-202ENST00000377340 SPA17Q15506 151 aa9.48□□□□□ -0.89
CRNKL1-202ENST00000377340 QRICH1Q2TAL8 776 aa9.48□□□□□ -0.89
CRNKL1-202ENST00000377340 OTUD6AQ7L8S5 288 aa9.48□□□□□ -0.89
CRNKL1-202ENST00000377340 MRPL44Q9H9J2 332 aaKnown RBP9.48□□□□□ -0.89
CRNKL1-202ENST00000377340 GBA2Q9HCG7 927 aaPredicted RBP9.48□□□□□ -0.89
CRNKL1-202ENST00000377340 COL3A1P02461 1466 aaPredicted RBP9.48□□□□□ -0.89
CRNKL1-202ENST00000377340 MEIS1O00470 390 aa9.48□□□□□ -0.89
CRNKL1-202ENST00000377340 COG2Q14746 738 aa9.48□□□□□ -0.89
CRNKL1-202ENST00000377340 KLHL40Q2TBA0 621 aa9.48□□□□□ -0.89
CRNKL1-202ENST00000377340 RAET1EQ8TD07 263 aa9.48□□□□□ -0.89
CRNKL1-202ENST00000377340 MAP7D2Q96T17 732 aa9.48□□□□□ -0.89
CRNKL1-202ENST00000377340 FBXO28Q9NVF7 368 aa9.48□□□□□ -0.89
CRNKL1-202ENST00000377340 ZNF202O95125 648 aa9.47□□□□□ -0.89
CRNKL1-202ENST00000377340 SNAPC2Q13487 334 aa9.47□□□□□ -0.89
CRNKL1-202ENST00000377340 FAM114A1Q8IWE2 563 aa9.47□□□□□ -0.89
CRNKL1-202ENST00000377340 DEPTORQ8TB45 409 aa9.47□□□□□ -0.89
CRNKL1-202ENST00000377340 FTOQ9C0B1 505 aaKnown RBP eCLIP9.47□□□□□ -0.89
CRNKL1-202ENST00000377340 TTC12Q9H892 705 aaPredicted RBP9.47□□□□□ -0.89
CRNKL1-202ENST00000377340 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.47□□□□□ -0.89
CRNKL1-202ENST00000377340 ROBO1Q9Y6N7 1651 aa9.47□□□□□ -0.89
CRNKL1-202ENST00000377340 RGS12O14924 1447 aa9.47□□□□□ -0.89
CRNKL1-202ENST00000377340 AK9Q5TCS8 1911 aa9.47□□□□□ -0.89
CRNKL1-202ENST00000377340 DDTLA6NHG4 134 aaPredicted RBP9.47□□□□□ -0.89
CRNKL1-202ENST00000377340 USO1O60763 962 aaKnown RBP9.47□□□□□ -0.89
CRNKL1-202ENST00000377340 UBASH3AP57075 661 aa9.47□□□□□ -0.89
CRNKL1-202ENST00000377340 FAM160A1Q05DH4 1040 aa9.47□□□□□ -0.89
CRNKL1-202ENST00000377340 ACER1Q8TDN7 264 aa9.47□□□□□ -0.89
CRNKL1-202ENST00000377340 APOL6Q9BWW8 343 aa9.47□□□□□ -0.89
CRNKL1-202ENST00000377340 FAM49AQ9H0Q0 323 aaPredicted RBP9.47□□□□□ -0.89
CRNKL1-202ENST00000377340 MTMR4Q9NYA4 1195 aa9.47□□□□□ -0.89
CRNKL1-202ENST00000377340 KIAA1024Q9UPX6 916 aa9.47□□□□□ -0.89
CRNKL1-202ENST00000377340 ZBTB5O15062 677 aa9.47□□□□□ -0.89
CRNKL1-202ENST00000377340 CUTAO60888 179 aa9.47□□□□□ -0.89
CRNKL1-202ENST00000377340 PTGS1P23219 599 aa9.47□□□□□ -0.89
CRNKL1-202ENST00000377340 POLGP54098 1239 aaPredicted RBP9.47□□□□□ -0.89
CRNKL1-202ENST00000377340 SKIDA1Q1XH10 827 aa9.47□□□□□ -0.89
CRNKL1-202ENST00000377340 GPBP1Q86WP2 473 aa9.47□□□□□ -0.89
CRNKL1-202ENST00000377340 HOMEZQ8IX15 550 aa9.47□□□□□ -0.89
CRNKL1-202ENST00000377340 TMX1Q9H3N1 280 aa9.47□□□□□ -0.89
CRNKL1-202ENST00000377340 SEPT9Q9UHD8 586 aaPredicted RBP9.47□□□□□ -0.89
CRNKL1-202ENST00000377340 MTMR6Q9Y217 621 aa9.47□□□□□ -0.89
CRNKL1-202ENST00000377340 ELP1O95163 1332 aa9.47□□□□□ -0.89
CRNKL1-202ENST00000377340 ZSCAN23Q3MJ62 389 aa9.47□□□□□ -0.89
CRNKL1-202ENST00000377340 PLCD3Q8N3E9 789 aa9.47□□□□□ -0.89
CRNKL1-202ENST00000377340 FERMT2Q96AC1 680 aa9.47□□□□□ -0.89
CRNKL1-202ENST00000377340 EPB41L4AQ9HCS5 686 aaPredicted RBP9.47□□□□□ -0.89
CRNKL1-202ENST00000377340 PRKAG2Q9UGJ0 569 aa9.47□□□□□ -0.89
CRNKL1-202ENST00000377340 PCDHA4Q9UN74 947 aa9.47□□□□□ -0.89
CRNKL1-202ENST00000377340 AKR1B10O60218 316 aa9.46□□□□□ -0.89
CRNKL1-202ENST00000377340 GADD45BO75293 160 aaPredicted RBP9.46□□□□□ -0.89
CRNKL1-202ENST00000377340 KRT19P08727 400 aa9.46□□□□□ -0.89
CRNKL1-202ENST00000377340 FCER1AP12319 257 aa9.46□□□□□ -0.89
CRNKL1-202ENST00000377340 CACNB1Q02641 598 aaPredicted RBP9.46□□□□□ -0.89
CRNKL1-202ENST00000377340 AMIGO3Q86WK7 504 aa9.46□□□□□ -0.89
CRNKL1-202ENST00000377340 POLD4Q9HCU8 107 aa9.46□□□□□ -0.89
CRNKL1-202ENST00000377340 PCDHAC2Q9Y5I4 1007 aa9.46□□□□□ -0.89
CRNKL1-202ENST00000377340 RPAP1Q9BWH6 1393 aaPredicted RBP9.46□□□□□ -0.89
CRNKL1-202ENST00000377340 FGFR2P21802 821 aa9.46□□□□□ -0.9
CRNKL1-202ENST00000377340 ECE1P42892 770 aa9.46□□□□□ -0.9
CRNKL1-202ENST00000377340 NOP2P46087 812 aaKnown RBP9.46□□□□□ -0.9
CRNKL1-202ENST00000377340 NFX1Q12986 1120 aaKnown RBP9.46□□□□□ -0.9
CRNKL1-202ENST00000377340 KARSQ15046 597 aaKnown RBP9.46□□□□□ -0.9
CRNKL1-202ENST00000377340 PDXDC2PQ6P474 469 aa9.46□□□□□ -0.9
CRNKL1-202ENST00000377340 STOX1Q6ZVD7 989 aa9.46□□□□□ -0.9
CRNKL1-202ENST00000377340 TMTC3Q6ZXV5 915 aa9.46□□□□□ -0.9
CRNKL1-202ENST00000377340 ADGRF4Q8IZF3 695 aa9.46□□□□□ -0.9
CRNKL1-202ENST00000377340 GPC2Q8N158 579 aa9.46□□□□□ -0.9
CRNKL1-202ENST00000377340 RBM46Q8TBY0 533 aaKnown RBP9.46□□□□□ -0.9
CRNKL1-202ENST00000377340 SERTAD1Q9UHV2 236 aa9.46□□□□□ -0.9
CRNKL1-202ENST00000377340 FEM1BQ9UK73 627 aa9.46□□□□□ -0.9
CRNKL1-202ENST00000377340 AKT3Q9Y243 479 aa9.46□□□□□ -0.9
CRNKL1-202ENST00000377340 CLIC4Q9Y696 253 aa9.46□□□□□ -0.9
CRNKL1-202ENST00000377340 INO80B-WBP1J3KQ70 363 aa9.46□□□□□ -0.9
CRNKL1-202ENST00000377340 EXOC3O60645 756 aa9.46□□□□□ -0.9
CRNKL1-202ENST00000377340 TMOD1P28289 359 aa9.46□□□□□ -0.9
CRNKL1-202ENST00000377340 ALX1Q15699 326 aa9.46□□□□□ -0.9
CRNKL1-202ENST00000377340 LDHDQ86WU2 507 aa9.46□□□□□ -0.9
CRNKL1-202ENST00000377340 RGS22Q8NE09 1264 aa9.46□□□□□ -0.9
CRNKL1-202ENST00000377340 ANO3Q9BYT9 981 aa9.46□□□□□ -0.9
CRNKL1-202ENST00000377340 INO80BQ9C086 356 aaPredicted RBP9.46□□□□□ -0.9
CRNKL1-202ENST00000377340 ZMYND15Q9H091 742 aa9.46□□□□□ -0.9
CRNKL1-202ENST00000377340 FRMD4BQ9Y2L6 1034 aa9.46□□□□□ -0.9
CRNKL1-202ENST00000377340 YEATS4O95619 227 aa9.45□□□□□ -0.9
CRNKL1-202ENST00000377340 SLURP2P0DP57 97 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms