RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 USP6NLQ92738 828 aa14.35□□□□□ -0.11
VRK3-202ENST00000377011 SH2D4AQ9H788 454 aa14.35□□□□□ -0.11
VRK3-202ENST00000377011 GOPCQ9HD26 462 aa14.35□□□□□ -0.11
VRK3-202ENST00000377011 FLRT1Q9NZU1 646 aa14.35□□□□□ -0.11
VRK3-202ENST00000377011 PPP1R9AQ9ULJ8 1098 aa14.35□□□□□ -0.11
VRK3-202ENST00000377011 MTMR6Q9Y217 621 aa14.35□□□□□ -0.11
VRK3-202ENST00000377011 KDM4AO75164 1064 aa14.34□□□□□ -0.11
VRK3-202ENST00000377011 GADD45BO75293 160 aaPredicted RBP14.34□□□□□ -0.11
VRK3-202ENST00000377011 GNRH1P01148 92 aa14.34□□□□□ -0.11
VRK3-202ENST00000377011 GJB2P29033 226 aa14.34□□□□□ -0.11
VRK3-202ENST00000377011 KRT32Q14532 448 aa14.34□□□□□ -0.11
VRK3-202ENST00000377011 MORN1Q5T089 497 aa14.34□□□□□ -0.11
VRK3-202ENST00000377011 TTBK2Q6IQ55 1244 aa14.34□□□□□ -0.11
VRK3-202ENST00000377011 KCTD1Q719H9 257 aa14.34□□□□□ -0.11
VRK3-202ENST00000377011 CYB5R4Q7L1T6 521 aa14.34□□□□□ -0.11
VRK3-202ENST00000377011 TRIB2Q92519 343 aa14.34□□□□□ -0.11
VRK3-202ENST00000377011 TMEM47Q9BQJ4 181 aa14.34□□□□□ -0.11
VRK3-202ENST00000377011 SPATC1LQ9H0A9 340 aa14.34□□□□□ -0.11
VRK3-202ENST00000377011 ZNF287Q9HBT7 754 aa14.34□□□□□ -0.11
VRK3-202ENST00000377011 RIPK3Q9Y572 518 aa14.34□□□□□ -0.11
VRK3-202ENST00000377011 VWA5AO00534 786 aa14.33□□□□□ -0.12
VRK3-202ENST00000377011 SLC27A2O14975 620 aa14.33□□□□□ -0.12
VRK3-202ENST00000377011 ERCC3P19447 782 aa14.33□□□□□ -0.12
VRK3-202ENST00000377011 PLS1Q14651 629 aa14.33□□□□□ -0.12
VRK3-202ENST00000377011 ADCK5Q3MIX3 580 aa14.33□□□□□ -0.12
VRK3-202ENST00000377011 WDR78Q5VTH9 848 aa14.33□□□□□ -0.12
VRK3-202ENST00000377011 GMCL1P1Q8NEA9 526 aa14.33□□□□□ -0.12
VRK3-202ENST00000377011 COA7Q96BR5 231 aa14.33□□□□□ -0.12
VRK3-202ENST00000377011 UNC93B1Q9H1C4 597 aa14.33□□□□□ -0.12
VRK3-202ENST00000377011 SENP2Q9HC62 589 aa14.33□□□□□ -0.12
VRK3-202ENST00000377011 HOXC10Q9NYD6 342 aa14.33□□□□□ -0.12
VRK3-202ENST00000377011 ZNF214Q9UL59 606 aaPredicted RBP14.33□□□□□ -0.12
VRK3-202ENST00000377011 CNPY2Q9Y2B0 182 aa14.33□□□□□ -0.12
VRK3-202ENST00000377011 ELP1O95163 1332 aa14.33□□□□□ -0.12
VRK3-202ENST00000377011 INHAP05111 366 aa14.32□□□□□ -0.12
VRK3-202ENST00000377011 HOXD10P28358 340 aa14.32□□□□□ -0.12
VRK3-202ENST00000377011 RGS19P49795 217 aa14.32□□□□□ -0.12
VRK3-202ENST00000377011 ARHGEF6Q15052 776 aa14.32□□□□□ -0.12
VRK3-202ENST00000377011 PLEKHH3Q7Z736 793 aa14.32□□□□□ -0.12
VRK3-202ENST00000377011 CCDC83Q8IWF9 413 aa14.32□□□□□ -0.12
VRK3-202ENST00000377011 NPLOC4Q8TAT6 608 aa14.32□□□□□ -0.12
VRK3-202ENST00000377011 CPVLQ9H3G5 476 aa14.32□□□□□ -0.12
VRK3-202ENST00000377011 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.32□□□□□ -0.12
VRK3-202ENST00000377011 ZSWIM5Q9P217 1185 aa14.32□□□□□ -0.12
VRK3-202ENST00000377011 ZNFX1Q9P2E3 1918 aaKnown RBP14.32□□□□□ -0.12
VRK3-202ENST00000377011 RBBP6Q7Z6E9 1792 aaKnown RBP14.32□□□□□ -0.12
VRK3-202ENST00000377011 FRMPD2Q68DX3 1309 aaPredicted RBP14.32□□□□□ -0.12
VRK3-202ENST00000377011 LARGE1O95461 756 aa14.32□□□□□ -0.12
VRK3-202ENST00000377011 PRMT2P55345 433 aa14.32□□□□□ -0.12
VRK3-202ENST00000377011 IRF5Q13568 498 aa14.32□□□□□ -0.12
VRK3-202ENST00000377011 BLOC1S2Q6QNY1 142 aa14.32□□□□□ -0.12
VRK3-202ENST00000377011 KIFC2Q96AC6 838 aa14.32□□□□□ -0.12
VRK3-202ENST00000377011 SHISA4Q96DD7 197 aa14.32□□□□□ -0.12
VRK3-202ENST00000377011 SLF1Q9BQI6 1058 aa14.32□□□□□ -0.12
VRK3-202ENST00000377011 TMEM232C9JQI7 657 aa14.31□□□□□ -0.12
VRK3-202ENST00000377011 COBLO75128 1261 aa14.31□□□□□ -0.12
VRK3-202ENST00000377011 BMP3P12645 472 aa14.31□□□□□ -0.12
VRK3-202ENST00000377011 RPS6KB1P23443 525 aa14.31□□□□□ -0.12
VRK3-202ENST00000377011 PTPREP23469 700 aa14.31□□□□□ -0.12
VRK3-202ENST00000377011 SLC16A2P36021 539 aa14.31□□□□□ -0.12
VRK3-202ENST00000377011 ME3Q16798 604 aa14.31□□□□□ -0.12
VRK3-202ENST00000377011 IMMTQ16891 758 aaKnown RBP14.31□□□□□ -0.12
VRK3-202ENST00000377011 CHST3Q7LGC8 479 aa14.31□□□□□ -0.12
VRK3-202ENST00000377011 MAP7D2Q96T17 732 aa14.31□□□□□ -0.12
VRK3-202ENST00000377011 PDCL3Q9H2J4 239 aa14.31□□□□□ -0.12
VRK3-202ENST00000377011 GDPD2Q9HCC8 539 aa14.31□□□□□ -0.12
VRK3-202ENST00000377011 RAVER2Q9HCJ3 691 aaKnown RBP14.31□□□□□ -0.12
VRK3-202ENST00000377011 TCP11L1Q9NUJ3 509 aa14.31□□□□□ -0.12
VRK3-202ENST00000377011 PDE4DIPQ5VU43 2346 aa14.31□□□□□ -0.12
VRK3-202ENST00000377011 CCL5P13501 91 aa14.3□□□□□ -0.12
VRK3-202ENST00000377011 MAPK4P31152 587 aa14.3□□□□□ -0.12
VRK3-202ENST00000377011 ST3GAL1Q11201 340 aa14.3□□□□□ -0.12
VRK3-202ENST00000377011 NCAPG2Q86XI2 1143 aa14.3□□□□□ -0.12
VRK3-202ENST00000377011 GTF3C2Q8WUA4 911 aaPredicted RBP14.3□□□□□ -0.12
VRK3-202ENST00000377011 GPHNQ9NQX3 736 aaPredicted RBP14.3□□□□□ -0.12
VRK3-202ENST00000377011 ZNF536O15090 1300 aa14.3□□□□□ -0.12
VRK3-202ENST00000377011 GOLGA8HP0CJ92 632 aa14.29□□□□□ -0.12
VRK3-202ENST00000377011 SLC1A4P43007 532 aa14.29□□□□□ -0.12
VRK3-202ENST00000377011 GRB14Q14449 540 aa14.29□□□□□ -0.12
VRK3-202ENST00000377011 CPXCR1Q8N123 301 aa14.29□□□□□ -0.12
VRK3-202ENST00000377011 ENAHQ8N8S7 591 aaPredicted RBP14.29□□□□□ -0.12
VRK3-202ENST00000377011 RNF214Q8ND24 703 aa14.29□□□□□ -0.12
VRK3-202ENST00000377011 GMCL1Q96IK5 515 aa14.29□□□□□ -0.12
VRK3-202ENST00000377011 NUDT12Q9BQG2 462 aa14.29□□□□□ -0.12
VRK3-202ENST00000377011 BIN2Q9UBW5 565 aaPredicted RBP14.29□□□□□ -0.12
VRK3-202ENST00000377011 E7EWF7 191 aa14.29□□□□□ -0.12
VRK3-202ENST00000377011 PGK2P07205 417 aa14.29□□□□□ -0.12
VRK3-202ENST00000377011 PDHBP11177 359 aa14.29□□□□□ -0.12
VRK3-202ENST00000377011 CPA1P15085 419 aa14.29□□□□□ -0.12
VRK3-202ENST00000377011 ANTXR2P58335 489 aa14.29□□□□□ -0.12
VRK3-202ENST00000377011 KRT85P78386 507 aa14.29□□□□□ -0.12
VRK3-202ENST00000377011 MAP2K5Q13163 448 aa14.29□□□□□ -0.12
VRK3-202ENST00000377011 SLAIN1Q8ND83 568 aa14.29□□□□□ -0.12
VRK3-202ENST00000377011 PXYLP1Q8TE99 480 aa14.29□□□□□ -0.12
VRK3-202ENST00000377011 ESR2Q92731 530 aa14.29□□□□□ -0.12
VRK3-202ENST00000377011 FUCA2Q9BTY2 467 aa14.29□□□□□ -0.12
VRK3-202ENST00000377011 SLC38A10Q9HBR0 1119 aa14.29□□□□□ -0.12
VRK3-202ENST00000377011 GPCPD1Q9NPB8 672 aa14.29□□□□□ -0.12
VRK3-202ENST00000377011 CTNNA3Q9UI47 895 aa14.29□□□□□ -0.12
VRK3-202ENST00000377011 TPCN1Q9ULQ1 816 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms