RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 NECAB2Q7Z6G3 386 aa25.88■■□□□ 1.73
SRM-201ENST00000376957 ENAHQ8N8S7 591 aaPredicted RBP25.88■■□□□ 1.73
SRM-201ENST00000376957 ANO2Q9NQ90 1003 aa25.88■■□□□ 1.73
SRM-201ENST00000376957 OGDHLQ9ULD0 1010 aa25.88■■□□□ 1.73
SRM-201ENST00000376957 CCPG1Q9ULG6 757 aa25.88■■□□□ 1.73
SRM-201ENST00000376957 CNPY2Q9Y2B0 182 aa25.88■■□□□ 1.73
SRM-201ENST00000376957 RBM8AQ9Y5S9 174 aaKnown RBP25.88■■□□□ 1.73
SRM-201ENST00000376957 CDC45O75419 566 aa25.87■■□□□ 1.73
SRM-201ENST00000376957 ICAM1P05362 532 aa25.87■■□□□ 1.73
SRM-201ENST00000376957 SNHG28P0DPA3 235 aa25.87■■□□□ 1.73
SRM-201ENST00000376957 ALAS1P13196 640 aa25.87■■□□□ 1.73
SRM-201ENST00000376957 SLC16A2P36021 539 aa25.87■■□□□ 1.73
SRM-201ENST00000376957 ZNF792Q3KQV3 632 aa25.87■■□□□ 1.73
SRM-201ENST00000376957 ASPRV1Q53RT3 343 aa25.87■■□□□ 1.73
SRM-201ENST00000376957 RNF20Q5VTR2 975 aa25.87■■□□□ 1.73
SRM-201ENST00000376957 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.87■■□□□ 1.73
SRM-201ENST00000376957 DPF3Q92784 378 aa25.87■■□□□ 1.73
SRM-201ENST00000376957 TRERF1Q96PN7 1200 aa25.87■■□□□ 1.73
SRM-201ENST00000376957 RNF146Q9NTX7 359 aa25.87■■□□□ 1.73
SRM-201ENST00000376957 PFASO15067 1338 aa25.87■■□□□ 1.73
SRM-201ENST00000376957 E7EWF7 191 aa25.86■■□□□ 1.73
SRM-201ENST00000376957 PRPF38BQ5VTL8 546 aaKnown RBP25.86■■□□□ 1.73
SRM-201ENST00000376957 TTBK2Q6IQ55 1244 aa25.86■■□□□ 1.73
SRM-201ENST00000376957 AGBL1Q96MI9 1066 aa25.86■■□□□ 1.73
SRM-201ENST00000376957 TINF2Q9BSI4 451 aa25.86■■□□□ 1.73
SRM-201ENST00000376957 RANBP17Q9H2T7 1088 aaKnown RBP25.86■■□□□ 1.73
SRM-201ENST00000376957 DDX20Q9UHI6 824 aaKnown RBP25.86■■□□□ 1.73
SRM-201ENST00000376957 IFIT3O14879 490 aaKnown RBP25.85■■□□□ 1.73
SRM-201ENST00000376957 PARP1P09874 1014 aaKnown RBP25.85■■□□□ 1.73
SRM-201ENST00000376957 CYBAP13498 195 aa25.85■■□□□ 1.73
SRM-201ENST00000376957 ZNF467Q7Z7K2 595 aaPredicted RBP25.85■■□□□ 1.73
SRM-201ENST00000376957 PPP4R2Q9NY27 417 aa25.85■■□□□ 1.73
SRM-201ENST00000376957 SEPT4O43236 478 aa25.84■■□□□ 1.73
SRM-201ENST00000376957 ZNF536O15090 1300 aa25.84■■□□□ 1.73
SRM-201ENST00000376957 PLXNA1Q9UIW2 1896 aa25.83■■□□□ 1.73
SRM-201ENST00000376957 POTEB2H3BUK9 544 aa25.83■■□□□ 1.73
SRM-201ENST00000376957 DHX16O60231 1041 aaKnown RBP25.83■■□□□ 1.73
SRM-201ENST00000376957 WTAPQ15007 396 aa25.83■■□□□ 1.73
SRM-201ENST00000376957 ARRDC4Q8NCT1 418 aa25.83■■□□□ 1.73
SRM-201ENST00000376957 PAWRQ96IZ0 340 aaKnown RBP25.83■■□□□ 1.73
SRM-201ENST00000376957 NR2E3Q9Y5X4 410 aa25.83■■□□□ 1.73
SRM-201ENST00000376957 SYNGAP1Q96PV0 1343 aa25.83■■□□□ 1.73
SRM-201ENST00000376957 DNAJC25-GNG10A0A024R161 153 aa25.82■■□□□ 1.72
SRM-201ENST00000376957 IGHA2P01877 340 aa25.82■■□□□ 1.72
SRM-201ENST00000376957 SNAP25P60880 206 aa25.82■■□□□ 1.72
SRM-201ENST00000376957 LHX8Q68G74 356 aa25.82■■□□□ 1.72
SRM-201ENST00000376957 RASGRP2Q7LDG7 609 aa25.82■■□□□ 1.72
SRM-201ENST00000376957 UBE2Q1Q7Z7E8 422 aa25.82■■□□□ 1.72
SRM-201ENST00000376957 LSG1Q9H089 658 aaKnown RBP25.82■■□□□ 1.72
SRM-201ENST00000376957 C11orf49Q9H6J7 331 aa25.82■■□□□ 1.72
SRM-201ENST00000376957 GOLGA8HP0CJ92 632 aa25.81■■□□□ 1.72
SRM-201ENST00000376957 CYB5R4Q7L1T6 521 aa25.81■■□□□ 1.72
SRM-201ENST00000376957 SKAP1Q86WV1 359 aa25.81■■□□□ 1.72
SRM-201ENST00000376957 TMTC2Q8N394 836 aa25.81■■□□□ 1.72
SRM-201ENST00000376957 MTA3Q9BTC8 594 aa25.81■■□□□ 1.72
SRM-201ENST00000376957 PDE4DIPQ5VU43 2346 aa25.8■■□□□ 1.72
SRM-201ENST00000376957 SEC23AQ15436 765 aa25.8■■□□□ 1.72
SRM-201ENST00000376957 TMEM67Q5HYA8 995 aa25.8■■□□□ 1.72
SRM-201ENST00000376957 MAMDC4Q6UXC1 1216 aa25.8■■□□□ 1.72
SRM-201ENST00000376957 WDR19Q8NEZ3 1342 aa25.8■■□□□ 1.72
SRM-201ENST00000376957 TNRC18O15417 2968 aaPredicted RBP25.79■■□□□ 1.72
SRM-201ENST00000376957 ASB14A6NK59 587 aa25.79■■□□□ 1.72
SRM-201ENST00000376957 RARBP10826 455 aa25.79■■□□□ 1.72
SRM-201ENST00000376957 MCM5P33992 734 aa25.79■■□□□ 1.72
SRM-201ENST00000376957 NSMFQ6X4W1 530 aa25.79■■□□□ 1.72
SRM-201ENST00000376957 CATIPQ7Z7H3 387 aa25.79■■□□□ 1.72
SRM-201ENST00000376957 MPHOSPH6Q99547 160 aaKnown RBP25.79■■□□□ 1.72
SRM-201ENST00000376957 UBA5Q9GZZ9 404 aa25.79■■□□□ 1.72
SRM-201ENST00000376957 A1CFQ9NQ94 594 aaKnown RBP25.79■■□□□ 1.72
SRM-201ENST00000376957 BRCA2P51587 3418 aa25.79■■□□□ 1.72
SRM-201ENST00000376957 SLC27A2O14975 620 aa25.78■■□□□ 1.72
SRM-201ENST00000376957 EVI5O60447 810 aa25.78■■□□□ 1.72
SRM-201ENST00000376957 AKR1A1P14550 325 aa25.78■■□□□ 1.72
SRM-201ENST00000376957 TRAF1Q13077 416 aa25.78■■□□□ 1.72
SRM-201ENST00000376957 PRAMEF19Q5SWL8 479 aa25.78■■□□□ 1.72
SRM-201ENST00000376957 CREB3L3Q68CJ9 461 aa25.78■■□□□ 1.72
SRM-201ENST00000376957 TRPV1Q8NER1 839 aa25.78■■□□□ 1.72
SRM-201ENST00000376957 MAF1Q9H063 256 aa25.78■■□□□ 1.72
SRM-201ENST00000376957 ABHD16BQ9H3Z7 469 aa25.78■■□□□ 1.72
SRM-201ENST00000376957 ADD3Q9UEY8 706 aaKnown RBP25.78■■□□□ 1.72
SRM-201ENST00000376957 KBTBD13C9JR72 458 aa25.77■■□□□ 1.72
SRM-201ENST00000376957 NECTIN1Q15223 517 aa25.77■■□□□ 1.72
SRM-201ENST00000376957 ADGRF4Q8IZF3 695 aa25.77■■□□□ 1.72
SRM-201ENST00000376957 TMEM87BQ96K49 555 aa25.77■■□□□ 1.72
SRM-201ENST00000376957 FAM184BQ9ULE4 1060 aa25.77■■□□□ 1.72
SRM-201ENST00000376957 B4DLN1 442 aa25.76■■□□□ 1.71
SRM-201ENST00000376957 DNM1LO00429 736 aa25.76■■□□□ 1.71
SRM-201ENST00000376957 MRPL12P52815 198 aaKnown RBP25.76■■□□□ 1.71
SRM-201ENST00000376957 CYP39A1Q9NYL5 469 aa25.76■■□□□ 1.71
SRM-201ENST00000376957 ZHX1Q9UKY1 873 aaPredicted RBP25.76■■□□□ 1.71
SRM-201ENST00000376957 PTPDC1A2A3K4 754 aa25.75■■□□□ 1.71
SRM-201ENST00000376957 KLRF2D3W0D1 207 aa25.75■■□□□ 1.71
SRM-201ENST00000376957 KRT32Q14532 448 aa25.75■■□□□ 1.71
SRM-201ENST00000376957 CDC37Q16543 378 aaPredicted RBP25.75■■□□□ 1.71
SRM-201ENST00000376957 MUM1L1Q5H9M0 696 aa25.75■■□□□ 1.71
SRM-201ENST00000376957 NFXL1Q6ZNB6 911 aa25.75■■□□□ 1.71
SRM-201ENST00000376957 STOX1Q6ZVD7 989 aa25.75■■□□□ 1.71
SRM-201ENST00000376957 CHST3Q7LGC8 479 aa25.75■■□□□ 1.71
SRM-201ENST00000376957 MB21D2Q8IYB1 491 aaPredicted RBP25.75■■□□□ 1.71
SRM-201ENST00000376957 FAM133AQ8N9E0 248 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms