RNA–Protein interactions for RNA: ENST00000376610.6

HDAC6-202, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-202ENST00000376610 ANKRD45Q5TZF3 282 aa21.91■■□□□ 1.1
HDAC6-202ENST00000376610 GMCL1Q96IK5 515 aa21.91■■□□□ 1.1
HDAC6-202ENST00000376610 TMEM39AQ9NV64 488 aa21.91■■□□□ 1.1
HDAC6-202ENST00000376610 RRP1P56182 461 aaKnown RBP21.9■■□□□ 1.1
HDAC6-202ENST00000376610 C9orf50Q5SZB4 431 aa21.9■■□□□ 1.1
HDAC6-202ENST00000376610 PCSK9Q8NBP7 692 aaKnown RBP21.9■■□□□ 1.1
HDAC6-202ENST00000376610 STAG1Q8WVM7 1258 aa21.9■■□□□ 1.1
HDAC6-202ENST00000376610 EVI5LQ96CN4 794 aa21.9■■□□□ 1.1
HDAC6-202ENST00000376610 GLT1D1Q96MS3 346 aa21.9■■□□□ 1.1
HDAC6-202ENST00000376610 MROH7Q68CQ1 1323 aa21.89■■□□□ 1.1
HDAC6-202ENST00000376610 KIAA0355O15063 1070 aa21.89■■□□□ 1.09
HDAC6-202ENST00000376610 C6orf222P0C671 652 aaPredicted RBP21.89■■□□□ 1.09
HDAC6-202ENST00000376610 MCCP23508 829 aa21.89■■□□□ 1.09
HDAC6-202ENST00000376610 KCNA10Q16322 511 aa21.89■■□□□ 1.09
HDAC6-202ENST00000376610 TKFCQ3LXA3 575 aa21.89■■□□□ 1.09
HDAC6-202ENST00000376610 CCDC129Q6ZRS4 1044 aa21.89■■□□□ 1.09
HDAC6-202ENST00000376610 ARMCX2Q7L311 632 aa21.89■■□□□ 1.09
HDAC6-202ENST00000376610 KLHDC9Q8NEP7 349 aa21.89■■□□□ 1.09
HDAC6-202ENST00000376610 FAM161BQ96MY7 647 aa21.89■■□□□ 1.09
HDAC6-202ENST00000376610 TOX2Q96NM4 488 aa21.89■■□□□ 1.09
HDAC6-202ENST00000376610 RANBP6O60518 1105 aaKnown RBP21.88■■□□□ 1.09
HDAC6-202ENST00000376610 CTDSPL2Q05D32 466 aa21.88■■□□□ 1.09
HDAC6-202ENST00000376610 CCDC144BQ3MJ40 725 aa21.88■■□□□ 1.09
HDAC6-202ENST00000376610 ANKRD33Q7Z3H0 272 aa21.88■■□□□ 1.09
HDAC6-202ENST00000376610 VTI1AQ96AJ9 217 aa21.88■■□□□ 1.09
HDAC6-202ENST00000376610 CHMP4CQ96CF2 233 aa21.88■■□□□ 1.09
HDAC6-202ENST00000376610 RNF146Q9NTX7 359 aa21.88■■□□□ 1.09
HDAC6-202ENST00000376610 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.88■■□□□ 1.09
HDAC6-202ENST00000376610 ELP1O95163 1332 aa21.87■■□□□ 1.09
HDAC6-202ENST00000376610 PLA2G6O60733 806 aa21.87■■□□□ 1.09
HDAC6-202ENST00000376610 CST5P28325 142 aaPredicted RBP21.87■■□□□ 1.09
HDAC6-202ENST00000376610 FPGSQ05932 587 aa21.87■■□□□ 1.09
HDAC6-202ENST00000376610 RCSD1Q6JBY9 416 aa21.87■■□□□ 1.09
HDAC6-202ENST00000376610 CCDC144CPQ8IYA2 1237 aa21.87■■□□□ 1.09
HDAC6-202ENST00000376610 RNPC3Q96LT9 517 aaKnown RBP21.87■■□□□ 1.09
HDAC6-202ENST00000376610 HELLSQ9NRZ9 838 aa21.87■■□□□ 1.09
HDAC6-202ENST00000376610 TOMM22Q9NS69 142 aa21.87■■□□□ 1.09
HDAC6-202ENST00000376610 SALL3Q9BXA9 1300 aa21.86■■□□□ 1.09
HDAC6-202ENST00000376610 LAMA2P24043 3122 aaKnown RBP21.86■■□□□ 1.09
HDAC6-202ENST00000376610 ASB14A6NK59 587 aa21.86■■□□□ 1.09
HDAC6-202ENST00000376610 ALAS1P13196 640 aa21.86■■□□□ 1.09
HDAC6-202ENST00000376610 SMAD3P84022 425 aaKnown RBP21.86■■□□□ 1.09
HDAC6-202ENST00000376610 KCTD1Q719H9 257 aa21.86■■□□□ 1.09
HDAC6-202ENST00000376610 NOL8Q76FK4 1167 aaKnown RBP21.86■■□□□ 1.09
HDAC6-202ENST00000376610 AGBL1Q96MI9 1066 aa21.86■■□□□ 1.09
HDAC6-202ENST00000376610 GUCD1Q96NT3 240 aa21.86■■□□□ 1.09
HDAC6-202ENST00000376610 TRERF1Q96PN7 1200 aa21.86■■□□□ 1.09
HDAC6-202ENST00000376610 ANAPC4Q9UJX5 808 aa21.86■■□□□ 1.09
HDAC6-202ENST00000376610 ASGR1P07306 291 aa21.85■■□□□ 1.09
HDAC6-202ENST00000376610 GJA9P57773 515 aa21.85■■□□□ 1.09
HDAC6-202ENST00000376610 CNTN2Q02246 1040 aa21.85■■□□□ 1.09
HDAC6-202ENST00000376610 CCDC96Q2M329 555 aa21.85■■□□□ 1.09
HDAC6-202ENST00000376610 GNASQ5JWF2 1037 aa21.85■■□□□ 1.09
HDAC6-202ENST00000376610 CCSAPQ6IQ19 270 aaPredicted RBP21.85■■□□□ 1.09
HDAC6-202ENST00000376610 CCDC174Q6PII3 467 aa21.85■■□□□ 1.09
HDAC6-202ENST00000376610 FAM133AQ8N9E0 248 aa21.85■■□□□ 1.09
HDAC6-202ENST00000376610 FGD4Q96M96 766 aa21.85■■□□□ 1.09
HDAC6-202ENST00000376610 UPF3AQ9H1J1 476 aaKnown RBP21.85■■□□□ 1.09
HDAC6-202ENST00000376610 A1CFQ9NQ94 594 aaKnown RBP21.85■■□□□ 1.09
HDAC6-202ENST00000376610 MTMR7Q9Y216 660 aa21.85■■□□□ 1.09
HDAC6-202ENST00000376610 MYADML2A6NDP7 307 aa21.84■■□□□ 1.09
HDAC6-202ENST00000376610 ORC4O43929 436 aa21.84■■□□□ 1.09
HDAC6-202ENST00000376610 ITGB8P26012 769 aa21.84■■□□□ 1.09
HDAC6-202ENST00000376610 PDE1AP54750 535 aa21.84■■□□□ 1.09
HDAC6-202ENST00000376610 FAAP100Q0VG06 881 aa21.84■■□□□ 1.09
HDAC6-202ENST00000376610 CRBNQ96SW2 442 aa21.84■■□□□ 1.09
HDAC6-202ENST00000376610 IL17RBQ9NRM6 502 aa21.84■■□□□ 1.09
HDAC6-202ENST00000376610 A0A0C4DFX4 3053 aa21.84■■□□□ 1.09
HDAC6-202ENST00000376610 ZNF536O15090 1300 aa21.83■■□□□ 1.09
HDAC6-202ENST00000376610 A0A0U1RQG5 324 aaPredicted RBP21.83■■□□□ 1.09
HDAC6-202ENST00000376610 FOXP2O15409 715 aa21.83■■□□□ 1.09
HDAC6-202ENST00000376610 NMT2O60551 498 aa21.83■■□□□ 1.09
HDAC6-202ENST00000376610 TNFAIP2Q03169 654 aa21.83■■□□□ 1.09
HDAC6-202ENST00000376610 HDAC1Q13547 482 aaPredicted RBP21.83■■□□□ 1.09
HDAC6-202ENST00000376610 ALX1Q15699 326 aa21.83■■□□□ 1.09
HDAC6-202ENST00000376610 VPS53Q5VIR6 699 aa21.83■■□□□ 1.09
HDAC6-202ENST00000376610 TICAM2Q86XR7 235 aa21.83■■□□□ 1.09
HDAC6-202ENST00000376610 DCAF4Q8WV16 495 aa21.83■■□□□ 1.09
HDAC6-202ENST00000376610 INCENPQ9NQS7 918 aa21.83■■□□□ 1.09
HDAC6-202ENST00000376610 CCPG1Q9ULG6 757 aa21.83■■□□□ 1.09
HDAC6-202ENST00000376610 PRR12Q9ULL5 1215 aa21.83■■□□□ 1.09
HDAC6-202ENST00000376610 TLR3O15455 904 aaKnown RBP21.82■■□□□ 1.08
HDAC6-202ENST00000376610 TIMP1P01033 207 aa21.82■■□□□ 1.08
HDAC6-202ENST00000376610 MCMDC2Q4G0Z9 681 aa21.82■■□□□ 1.08
HDAC6-202ENST00000376610 RRP12Q5JTH9 1297 aaKnown RBP21.82■■□□□ 1.08
HDAC6-202ENST00000376610 ADCY6O43306 1168 aa21.81■■□□□ 1.08
HDAC6-202ENST00000376610 CDX2Q99626 313 aaPredicted RBP21.81■■□□□ 1.08
HDAC6-202ENST00000376610 KATNBL1Q9H079 304 aa21.81■■□□□ 1.08
HDAC6-202ENST00000376610 AP5M1Q9H0R1 490 aa21.81■■□□□ 1.08
HDAC6-202ENST00000376610 SEMA6BQ9H3T3 888 aa21.81■■□□□ 1.08
HDAC6-202ENST00000376610 SOWAHBA6NEL2 793 aa21.8■■□□□ 1.08
HDAC6-202ENST00000376610 TRIM6-TRIM34B2RNG4 842 aa21.8■■□□□ 1.08
HDAC6-202ENST00000376610 ARVCFO00192 962 aa21.8■■□□□ 1.08
HDAC6-202ENST00000376610 ZEB2O60315 1214 aa21.8■■□□□ 1.08
HDAC6-202ENST00000376610 ICAM1P05362 532 aa21.8■■□□□ 1.08
HDAC6-202ENST00000376610 TOP1P11387 765 aaKnown RBP21.8■■□□□ 1.08
HDAC6-202ENST00000376610 SNAP25P60880 206 aa21.8■■□□□ 1.08
HDAC6-202ENST00000376610 NSMFQ6X4W1 530 aa21.8■■□□□ 1.08
HDAC6-202ENST00000376610 TBX21Q9UL17 535 aa21.8■■□□□ 1.08
HDAC6-202ENST00000376610 TMEM265A0A087WTH1 108 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms