RNA–Protein interactions for RNA: ENST00000375441.7

CUL4A-203, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 4,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-203ENST00000375441 SMCO2A6NFE2 343 aa14.65□□□□□ -0.06
CUL4A-203ENST00000375441 ATP2C1P98194 919 aaPredicted RBP14.65□□□□□ -0.06
CUL4A-203ENST00000375441 FAM182BQ5T319 152 aa14.65□□□□□ -0.06
CUL4A-203ENST00000375441 KRT25Q7Z3Z0 450 aa14.65□□□□□ -0.06
CUL4A-203ENST00000375441 DISC1Q9NRI5 854 aa14.65□□□□□ -0.06
CUL4A-203ENST00000375441 PCDHA4Q9UN74 947 aa14.65□□□□□ -0.06
CUL4A-203ENST00000375441 CYP2D6P10635 497 aa14.65□□□□□ -0.06
CUL4A-203ENST00000375441 USP8P40818 1118 aa14.65□□□□□ -0.06
CUL4A-203ENST00000375441 TBX2Q13207 712 aaPredicted RBP14.65□□□□□ -0.06
CUL4A-203ENST00000375441 CFAP58Q5T655 872 aa14.65□□□□□ -0.06
CUL4A-203ENST00000375441 MAPKAPK5Q8IW41 473 aa14.65□□□□□ -0.06
CUL4A-203ENST00000375441 TRIM58Q8NG06 486 aa14.65□□□□□ -0.06
CUL4A-203ENST00000375441 TGFBRAP1Q8WUH2 860 aa14.65□□□□□ -0.06
CUL4A-203ENST00000375441 PP2D1A8MPX8 630 aa14.64□□□□□ -0.07
CUL4A-203ENST00000375441 RDXP35241 583 aaKnown RBP14.64□□□□□ -0.07
CUL4A-203ENST00000375441 FAM98CQ17RN3 349 aaKnown RBP14.64□□□□□ -0.07
CUL4A-203ENST00000375441 ATP8A2Q9NTI2 1148 aa14.64□□□□□ -0.07
CUL4A-203ENST00000375441 SASH3O75995 380 aa14.64□□□□□ -0.07
CUL4A-203ENST00000375441 ZRANB2O95218 330 aaKnown RBP eCLIP14.64□□□□□ -0.07
CUL4A-203ENST00000375441 OR52Z1P0C646 297 aa14.64□□□□□ -0.07
CUL4A-203ENST00000375441 TPTE2Q6XPS3 522 aa14.64□□□□□ -0.07
CUL4A-203ENST00000375441 UIMC1Q96RL1 719 aa14.64□□□□□ -0.07
CUL4A-203ENST00000375441 TRIM10Q9UDY6 481 aa14.64□□□□□ -0.07
CUL4A-203ENST00000375441 PPP1R3GB7ZBB8 358 aa14.64□□□□□ -0.07
CUL4A-203ENST00000375441 KLRF2D3W0D1 207 aa14.64□□□□□ -0.07
CUL4A-203ENST00000375441 ERLIN2O94905 339 aa14.64□□□□□ -0.07
CUL4A-203ENST00000375441 CCDC84Q86UT8 332 aaPredicted RBP14.64□□□□□ -0.07
CUL4A-203ENST00000375441 SRBD1Q8N5C6 995 aaKnown RBP14.64□□□□□ -0.07
CUL4A-203ENST00000375441 P2RX5Q93086 422 aa14.64□□□□□ -0.07
CUL4A-203ENST00000375441 NHEJ1Q9H9Q4 299 aaPredicted RBP14.64□□□□□ -0.07
CUL4A-203ENST00000375441 BIN2Q9UBW5 565 aaPredicted RBP14.64□□□□□ -0.07
CUL4A-203ENST00000375441 LOC102724428A0A0B4J2F2 783 aa14.63□□□□□ -0.07
CUL4A-203ENST00000375441 ANKRD65E5RJM6 399 aa14.63□□□□□ -0.07
CUL4A-203ENST00000375441 MYO1CO00159 1063 aa14.63□□□□□ -0.07
CUL4A-203ENST00000375441 USP17L8P0C7I0 530 aa14.63□□□□□ -0.07
CUL4A-203ENST00000375441 SARSP49591 514 aaKnown RBP14.63□□□□□ -0.07
CUL4A-203ENST00000375441 SIK1P57059 783 aa14.63□□□□□ -0.07
CUL4A-203ENST00000375441 MDM2Q00987 491 aaPredicted RBP14.63□□□□□ -0.07
CUL4A-203ENST00000375441 RAPGEF1Q13905 1077 aa14.63□□□□□ -0.07
CUL4A-203ENST00000375441 ARL6IP4Q66PJ3 421 aaKnown RBP14.63□□□□□ -0.07
CUL4A-203ENST00000375441 LIMA1Q9UHB6 759 aaKnown RBP14.63□□□□□ -0.07
CUL4A-203ENST00000375441 LRRC37A3O60309 1634 aa14.63□□□□□ -0.07
CUL4A-203ENST00000375441 FAM237AA0A1B0GTK4 181 aa14.63□□□□□ -0.07
CUL4A-203ENST00000375441 TCRBV5S4A2TA0A5A2 114 aa14.63□□□□□ -0.07
CUL4A-203ENST00000375441 LGALS16A8MUM7 142 aa14.63□□□□□ -0.07
CUL4A-203ENST00000375441 C2orf54Q08AI8 447 aa14.63□□□□□ -0.07
CUL4A-203ENST00000375441 RSRC2Q7L4I2 434 aaKnown RBP14.63□□□□□ -0.07
CUL4A-203ENST00000375441 VPS36Q86VN1 386 aa14.63□□□□□ -0.07
CUL4A-203ENST00000375441 DHTKD1Q96HY7 919 aaPredicted RBP14.63□□□□□ -0.07
CUL4A-203ENST00000375441 NOX5Q96PH1 765 aa14.63□□□□□ -0.07
CUL4A-203ENST00000375441 BRIP1Q9BX63 1249 aa14.63□□□□□ -0.07
CUL4A-203ENST00000375441 LTN1O94822 1766 aa14.63□□□□□ -0.07
CUL4A-203ENST00000375441 MRPS25P82663 173 aaKnown RBP14.63□□□□□ -0.07
CUL4A-203ENST00000375441 PICALMQ13492 652 aa14.63□□□□□ -0.07
CUL4A-203ENST00000375441 NKX1-1Q15270 411 aaPredicted RBP14.63□□□□□ -0.07
CUL4A-203ENST00000375441 SNX29Q8TEQ0 813 aa14.63□□□□□ -0.07
CUL4A-203ENST00000375441 ATRIPQ8WXE1 791 aa14.63□□□□□ -0.07
CUL4A-203ENST00000375441 C6orf229H3BNL8 230 aa14.63□□□□□ -0.07
CUL4A-203ENST00000375441 MECOMQ03112 1051 aa14.63□□□□□ -0.07
CUL4A-203ENST00000375441 PFKFB3Q16875 520 aaPredicted RBP14.63□□□□□ -0.07
CUL4A-203ENST00000375441 NOA1Q8NC60 698 aaKnown RBP14.63□□□□□ -0.07
CUL4A-203ENST00000375441 PNKPQ96T60 521 aa14.63□□□□□ -0.07
CUL4A-203ENST00000375441 TBC1D7Q9P0N9 293 aa14.63□□□□□ -0.07
CUL4A-203ENST00000375441 BUB1O43683 1085 aa14.62□□□□□ -0.07
CUL4A-203ENST00000375441 CXCR5P32302 372 aa14.62□□□□□ -0.07
CUL4A-203ENST00000375441 GTF2A1P52655 376 aaPredicted RBP14.62□□□□□ -0.07
CUL4A-203ENST00000375441 EIF6P56537 245 aaKnown RBP14.62□□□□□ -0.07
CUL4A-203ENST00000375441 ZBED6P86452 979 aa14.62□□□□□ -0.07
CUL4A-203ENST00000375441 PPARDQ03181 441 aa14.62□□□□□ -0.07
CUL4A-203ENST00000375441 ERFEQ4G0M1 354 aa14.62□□□□□ -0.07
CUL4A-203ENST00000375441 ZSCAN29Q8IWY8 852 aaPredicted RBP14.62□□□□□ -0.07
CUL4A-203ENST00000375441 DYNLL2Q96FJ2 89 aa14.62□□□□□ -0.07
CUL4A-203ENST00000375441 NYXQ9GZU5 481 aa14.62□□□□□ -0.07
CUL4A-203ENST00000375441 THAP9Q9H5L6 903 aa14.62□□□□□ -0.07
CUL4A-203ENST00000375441 PLCG1P19174 1290 aa14.62□□□□□ -0.07
CUL4A-203ENST00000375441 ZNF76P36508 570 aa14.62□□□□□ -0.07
CUL4A-203ENST00000375441 KCNQ4P56696 695 aa14.62□□□□□ -0.07
CUL4A-203ENST00000375441 CALCRLQ16602 461 aa14.62□□□□□ -0.07
CUL4A-203ENST00000375441 TEX11Q8IYF3 940 aa14.62□□□□□ -0.07
CUL4A-203ENST00000375441 REXO1Q8N1G1 1221 aaKnown RBP14.62□□□□□ -0.07
CUL4A-203ENST00000375441 RPGRQ92834 1020 aaKnown RBP14.62□□□□□ -0.07
CUL4A-203ENST00000375441 HSD3B7Q9H2F3 369 aa14.62□□□□□ -0.07
CUL4A-203ENST00000375441 MNAT1P51948 309 aa14.62□□□□□ -0.07
CUL4A-203ENST00000375441 PRPF4BQ13523 1007 aaKnown RBP14.62□□□□□ -0.07
CUL4A-203ENST00000375441 EARS2Q5JPH6 523 aaKnown RBP14.62□□□□□ -0.07
CUL4A-203ENST00000375441 GSPT2Q8IYD1 628 aaKnown RBP14.62□□□□□ -0.07
CUL4A-203ENST00000375441 KIFC2Q96AC6 838 aa14.62□□□□□ -0.07
CUL4A-203ENST00000375441 GPCPD1Q9NPB8 672 aa14.62□□□□□ -0.07
CUL4A-203ENST00000375441 NDUFAB1O14561 156 aa14.61□□□□□ -0.07
CUL4A-203ENST00000375441 N4BP1O75113 896 aaKnown RBP14.61□□□□□ -0.07
CUL4A-203ENST00000375441 TFRCP02786 760 aaKnown RBP14.61□□□□□ -0.07
CUL4A-203ENST00000375441 ATP1A1P05023 1023 aaKnown RBP14.61□□□□□ -0.07
CUL4A-203ENST00000375441 CCNE1P24864 410 aa14.61□□□□□ -0.07
CUL4A-203ENST00000375441 IFFO1Q0D2I5 559 aa14.61□□□□□ -0.07
CUL4A-203ENST00000375441 SLC9C1Q4G0N8 1177 aa14.61□□□□□ -0.07
CUL4A-203ENST00000375441 MICALCLQ6ZW33 695 aa14.61□□□□□ -0.07
CUL4A-203ENST00000375441 NEK8Q86SG6 692 aa14.61□□□□□ -0.07
CUL4A-203ENST00000375441 ERVK-24P63145 666 aa14.61□□□□□ -0.07
CUL4A-203ENST00000375441 PPFIA1Q13136 1202 aa14.61□□□□□ -0.07
CUL4A-203ENST00000375441 NT5DC1Q5TFE4 455 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms