RNA–Protein interactions for RNA: ENST00000374695.7

HSPG2-203, Transcript of heparan sulfate proteoglycan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPG2, Length 14,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-203ENST00000374695 C16orf71Q8IYS4 520 aaPredicted RBP9.12□□□□□ -0.95
HSPG2-203ENST00000374695 LRRC37BQ96QE4 947 aa9.12□□□□□ -0.95
HSPG2-203ENST00000374695 NOS1P29475 1434 aa9.12□□□□□ -0.95
HSPG2-203ENST00000374695 SCYL3Q8IZE3 742 aa9.12□□□□□ -0.95
HSPG2-203ENST00000374695 SKA2Q8WVK7 121 aaPredicted RBP9.12□□□□□ -0.95
HSPG2-203ENST00000374695 TMEM247A6NEH6 219 aa9.12□□□□□ -0.95
HSPG2-203ENST00000374695 AKAP4Q5JQC9 854 aa9.12□□□□□ -0.95
HSPG2-203ENST00000374695 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.12□□□□□ -0.95
HSPG2-203ENST00000374695 CHUKO15111 745 aa9.12□□□□□ -0.95
HSPG2-203ENST00000374695 CREB3O43889 395 aa9.12□□□□□ -0.95
HSPG2-203ENST00000374695 IQCB1Q15051 598 aa9.12□□□□□ -0.95
HSPG2-203ENST00000374695 SNX29Q8TEQ0 813 aa9.12□□□□□ -0.95
HSPG2-203ENST00000374695 SAAL1Q96ER3 474 aa9.12□□□□□ -0.95
HSPG2-203ENST00000374695 VGLL3A8MV65 326 aa9.12□□□□□ -0.95
HSPG2-203ENST00000374695 IFNB1P01574 187 aa9.12□□□□□ -0.95
HSPG2-203ENST00000374695 LIG3P49916 1009 aa9.12□□□□□ -0.95
HSPG2-203ENST00000374695 BCL2L12Q9HB09 334 aa9.12□□□□□ -0.95
HSPG2-203ENST00000374695 SERPINI2O75830 405 aa9.12□□□□□ -0.95
HSPG2-203ENST00000374695 EPHB4P54760 987 aa9.12□□□□□ -0.95
HSPG2-203ENST00000374695 SNX1Q13596 522 aa9.12□□□□□ -0.95
HSPG2-203ENST00000374695 LCA5Q86VQ0 697 aa9.12□□□□□ -0.95
HSPG2-203ENST00000374695 PBRM1Q86U86 1689 aa9.12□□□□□ -0.95
HSPG2-203ENST00000374695 KIAA0586Q9BVV6 1533 aa9.12□□□□□ -0.95
HSPG2-203ENST00000374695 GPC4O75487 556 aa9.12□□□□□ -0.95
HSPG2-203ENST00000374695 ATICP31939 592 aa9.12□□□□□ -0.95
HSPG2-203ENST00000374695 ALS2CLQ60I27 953 aa9.12□□□□□ -0.95
HSPG2-203ENST00000374695 JDP2Q8WYK2 163 aa9.12□□□□□ -0.95
HSPG2-203ENST00000374695 NIP7Q9Y221 180 aaKnown RBP eCLIP9.12□□□□□ -0.95
HSPG2-203ENST00000374695 PCDHB13Q9Y5F0 798 aa9.12□□□□□ -0.95
HSPG2-203ENST00000374695 CITO14578 2027 aa9.12□□□□□ -0.95
HSPG2-203ENST00000374695 KIF20BQ96Q89 1820 aa9.12□□□□□ -0.95
HSPG2-203ENST00000374695 CHMP2AO43633 222 aa9.12□□□□□ -0.95
HSPG2-203ENST00000374695 TNNI1P19237 187 aa9.12□□□□□ -0.95
HSPG2-203ENST00000374695 PIK3AP1Q6ZUJ8 805 aa9.12□□□□□ -0.95
HSPG2-203ENST00000374695 PPME1Q9Y570 386 aa9.12□□□□□ -0.95
HSPG2-203ENST00000374695 TAF11Q15544 211 aa9.12□□□□□ -0.95
HSPG2-203ENST00000374695 TPTE2Q6XPS3 522 aa9.12□□□□□ -0.95
HSPG2-203ENST00000374695 ANKRD35Q8N283 1001 aa9.12□□□□□ -0.95
HSPG2-203ENST00000374695 SLF1Q9BQI6 1058 aa9.12□□□□□ -0.95
HSPG2-203ENST00000374695 PYGBP11216 843 aa9.12□□□□□ -0.95
HSPG2-203ENST00000374695 BPIFB4P59827 614 aa9.12□□□□□ -0.95
HSPG2-203ENST00000374695 GRAMD4Q6IC98 578 aa9.12□□□□□ -0.95
HSPG2-203ENST00000374695 TRPM2O94759 1503 aa9.11□□□□□ -0.95
HSPG2-203ENST00000374695 H7C1D1 291 aa9.11□□□□□ -0.95
HSPG2-203ENST00000374695 CD19P15391 556 aa9.11□□□□□ -0.95
HSPG2-203ENST00000374695 SERPINB10P48595 397 aa9.11□□□□□ -0.95
HSPG2-203ENST00000374695 TERF2Q15554 542 aa9.11□□□□□ -0.95
HSPG2-203ENST00000374695 RNF207Q6ZRF8 634 aa9.11□□□□□ -0.95
HSPG2-203ENST00000374695 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.11□□□□□ -0.95
HSPG2-203ENST00000374695 PLCH2O75038 1416 aa9.11□□□□□ -0.95
HSPG2-203ENST00000374695 TMEM232C9JQI7 657 aa9.11□□□□□ -0.95
HSPG2-203ENST00000374695 IFT88Q13099 833 aa9.11□□□□□ -0.95
HSPG2-203ENST00000374695 DRP2Q13474 957 aa9.11□□□□□ -0.95
HSPG2-203ENST00000374695 TSC22D3Q99576 134 aa9.11□□□□□ -0.95
HSPG2-203ENST00000374695 MCF2P10911 925 aa9.11□□□□□ -0.95
HSPG2-203ENST00000374695 NGLY1Q96IV0 654 aa9.11□□□□□ -0.95
HSPG2-203ENST00000374695 TAB2Q9NYJ8 693 aa9.11□□□□□ -0.95
HSPG2-203ENST00000374695 SPDYE16A6NNV3 312 aaPredicted RBP9.11□□□□□ -0.95
HSPG2-203ENST00000374695 KRT8P05787 483 aa9.11□□□□□ -0.95
HSPG2-203ENST00000374695 RCN2Q14257 317 aa9.11□□□□□ -0.95
HSPG2-203ENST00000374695 SPDYE2Q495Y8 402 aa9.11□□□□□ -0.95
HSPG2-203ENST00000374695 PDE4DIPQ5VU43 2346 aa9.11□□□□□ -0.95
HSPG2-203ENST00000374695 IFNA8P32881 189 aa9.11□□□□□ -0.95
HSPG2-203ENST00000374695 YARSP54577 528 aaKnown RBP9.11□□□□□ -0.95
HSPG2-203ENST00000374695 NCAPH2Q6IBW4 605 aa9.11□□□□□ -0.95
HSPG2-203ENST00000374695 RBM17Q96I25 401 aaKnown RBP9.11□□□□□ -0.95
HSPG2-203ENST00000374695 SLC5A4Q9NY91 659 aa9.11□□□□□ -0.95
HSPG2-203ENST00000374695 IPO5O00410 1097 aaKnown RBP9.11□□□□□ -0.95
HSPG2-203ENST00000374695 PTPREP23469 700 aa9.11□□□□□ -0.95
HSPG2-203ENST00000374695 ATP1A2P50993 1020 aa9.11□□□□□ -0.95
HSPG2-203ENST00000374695 NFKBIAP25963 317 aa9.11□□□□□ -0.95
HSPG2-203ENST00000374695 PLEKHM2Q8IWE5 1019 aa9.11□□□□□ -0.95
HSPG2-203ENST00000374695 FAM186BQ8IYM0 893 aa9.11□□□□□ -0.95
HSPG2-203ENST00000374695 CALR3Q96L12 384 aaKnown RBP9.11□□□□□ -0.95
HSPG2-203ENST00000374695 INTS9Q9NV88 658 aaKnown RBP9.11□□□□□ -0.95
HSPG2-203ENST00000374695 TSPOAP1O95153 1857 aa9.11□□□□□ -0.95
HSPG2-203ENST00000374695 HEXIM1O94992 359 aaKnown RBP9.11□□□□□ -0.95
HSPG2-203ENST00000374695 TNNC2P02585 160 aa9.11□□□□□ -0.95
HSPG2-203ENST00000374695 LONP1P36776 959 aaKnown RBP9.11□□□□□ -0.95
HSPG2-203ENST00000374695 CNPY4Q8N129 248 aa9.11□□□□□ -0.95
HSPG2-203ENST00000374695 PIP4K2CQ8TBX8 421 aa9.11□□□□□ -0.95
HSPG2-203ENST00000374695 PHLPP2Q6ZVD8 1323 aa9.11□□□□□ -0.95
HSPG2-203ENST00000374695 A6NJR5 290 aa9.11□□□□□ -0.95
HSPG2-203ENST00000374695 USP6NLQ92738 828 aa9.11□□□□□ -0.95
HSPG2-203ENST00000374695 CUEDC2Q9H467 287 aa9.11□□□□□ -0.95
HSPG2-203ENST00000374695 IQSEC3Q9UPP2 1182 aaPredicted RBP9.11□□□□□ -0.95
HSPG2-203ENST00000374695 CAPN9O14815 690 aa9.11□□□□□ -0.95
HSPG2-203ENST00000374695 KRT19P08727 400 aa9.11□□□□□ -0.95
HSPG2-203ENST00000374695 SLC1A4P43007 532 aa9.11□□□□□ -0.95
HSPG2-203ENST00000374695 AOC3Q16853 763 aa9.11□□□□□ -0.95
HSPG2-203ENST00000374695 CWF19L2Q2TBE0 894 aaKnown RBP9.11□□□□□ -0.95
HSPG2-203ENST00000374695 KRT26Q7Z3Y9 468 aa9.11□□□□□ -0.95
HSPG2-203ENST00000374695 RETREG2Q8NC44 543 aa9.11□□□□□ -0.95
HSPG2-203ENST00000374695 PAIP2BQ9ULR5 123 aaKnown RBP9.11□□□□□ -0.95
HSPG2-203ENST00000374695 SHROOM2Q13796 1616 aa9.11□□□□□ -0.95
HSPG2-203ENST00000374695 MAP3K10Q02779 954 aa9.11□□□□□ -0.95
HSPG2-203ENST00000374695 FLOT2Q14254 428 aa9.11□□□□□ -0.95
HSPG2-203ENST00000374695 ZBTB8OSQ8IWT0 167 aa9.11□□□□□ -0.95
HSPG2-203ENST00000374695 FGD4Q96M96 766 aa9.11□□□□□ -0.95
HSPG2-203ENST00000374695 F8W031 263 aaPredicted RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms