RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 GDAQ9Y2T3 454 aa20.67■□□□□ 0.9
RXRB-202ENST00000374685 SPZ1Q9BXG8 430 aa20.67■□□□□ 0.9
RXRB-202ENST00000374685 SRCAPQ6ZRS2 3230 aa20.67■□□□□ 0.9
RXRB-202ENST00000374685 ANKRD31Q8N7Z5 1873 aa20.66■□□□□ 0.9
RXRB-202ENST00000374685 ZBTB22O15209 634 aa20.66■□□□□ 0.9
RXRB-202ENST00000374685 ECE2O60344 883 aa20.66■□□□□ 0.9
RXRB-202ENST00000374685 HLA-DOAP06340 250 aa20.66■□□□□ 0.9
RXRB-202ENST00000374685 TECP42680 631 aa20.66■□□□□ 0.9
RXRB-202ENST00000374685 CEP135Q66GS9 1140 aa20.66■□□□□ 0.9
RXRB-202ENST00000374685 ZNF772Q68DY9 489 aaPredicted RBP20.66■□□□□ 0.9
RXRB-202ENST00000374685 CCDC150Q8NCX0 1101 aa20.66■□□□□ 0.9
RXRB-202ENST00000374685 CDK5RAP2Q96SN8 1893 aa20.66■□□□□ 0.9
RXRB-202ENST00000374685 RXRBP28702 533 aa20.66■□□□□ 0.9
RXRB-202ENST00000374685 SHMT1P34896 483 aa20.66■□□□□ 0.9
RXRB-202ENST00000374685 CCT6AP40227 531 aaKnown RBP20.66■□□□□ 0.9
RXRB-202ENST00000374685 NONOQ15233 471 aaKnown RBP eCLIP20.66■□□□□ 0.9
RXRB-202ENST00000374685 EZH2Q15910 746 aaKnown RBP20.66■□□□□ 0.9
RXRB-202ENST00000374685 UBE2SQ16763 222 aa20.66■□□□□ 0.9
RXRB-202ENST00000374685 FAM177A1Q8N128 213 aaPredicted RBP20.66■□□□□ 0.9
RXRB-202ENST00000374685 CCAR2Q8N163 923 aaKnown RBP20.66■□□□□ 0.9
RXRB-202ENST00000374685 IRX5P78411 483 aaPredicted RBP20.65■□□□□ 0.9
RXRB-202ENST00000374685 E2F4Q16254 413 aa20.65■□□□□ 0.9
RXRB-202ENST00000374685 REXO1Q8N1G1 1221 aaKnown RBP20.65■□□□□ 0.9
RXRB-202ENST00000374685 ENOX1Q8TC92 643 aaKnown RBP20.65■□□□□ 0.9
RXRB-202ENST00000374685 M0R2N6 131 aa20.65■□□□□ 0.9
RXRB-202ENST00000374685 TEX33O43247 280 aa20.65■□□□□ 0.9
RXRB-202ENST00000374685 TXKP42681 527 aa20.65■□□□□ 0.9
RXRB-202ENST00000374685 TNNI2P48788 182 aa20.65■□□□□ 0.9
RXRB-202ENST00000374685 GABPAQ06546 454 aa20.65■□□□□ 0.9
RXRB-202ENST00000374685 PDXDC2PQ6P474 469 aa20.65■□□□□ 0.9
RXRB-202ENST00000374685 SH3RF1Q7Z6J0 888 aa20.65■□□□□ 0.9
RXRB-202ENST00000374685 VSTM4Q8IW00 320 aa20.65■□□□□ 0.9
RXRB-202ENST00000374685 GJA10Q969M2 543 aa20.65■□□□□ 0.9
RXRB-202ENST00000374685 LZTS2Q9BRK4 669 aa20.65■□□□□ 0.9
RXRB-202ENST00000374685 TRIM34Q9BYJ4 488 aa20.65■□□□□ 0.9
RXRB-202ENST00000374685 TMX1Q9H3N1 280 aa20.65■□□□□ 0.9
RXRB-202ENST00000374685 ADAMTSL1Q8N6G6 1762 aa20.65■□□□□ 0.9
RXRB-202ENST00000374685 DDTLA6NHG4 134 aaPredicted RBP20.64■□□□□ 0.9
RXRB-202ENST00000374685 GDF11O95390 407 aa20.64■□□□□ 0.9
RXRB-202ENST00000374685 TTLL1O95922 423 aa20.64■□□□□ 0.9
RXRB-202ENST00000374685 SNAP25P60880 206 aa20.64■□□□□ 0.9
RXRB-202ENST00000374685 E4F1Q66K89 784 aaPredicted RBP20.64■□□□□ 0.9
RXRB-202ENST00000374685 TRIML1Q8N9V2 468 aa20.64■□□□□ 0.9
RXRB-202ENST00000374685 SPATA20Q8TB22 786 aa20.64■□□□□ 0.9
RXRB-202ENST00000374685 ZMYND12Q9H0C1 365 aa20.64■□□□□ 0.9
RXRB-202ENST00000374685 PES1O00541 588 aaKnown RBP20.64■□□□□ 0.89
RXRB-202ENST00000374685 C21orf2O43822 256 aa20.64■□□□□ 0.89
RXRB-202ENST00000374685 NRDCO43847 1150 aa20.64■□□□□ 0.89
RXRB-202ENST00000374685 GNA11P29992 359 aa20.64■□□□□ 0.89
RXRB-202ENST00000374685 CCDC12Q8WUD4 166 aaPredicted RBP20.64■□□□□ 0.89
RXRB-202ENST00000374685 LONP1P36776 959 aaKnown RBP20.63■□□□□ 0.89
RXRB-202ENST00000374685 NAA30Q147X3 362 aaPredicted RBP20.63■□□□□ 0.89
RXRB-202ENST00000374685 SAMD1Q6SPF0 538 aaPredicted RBP20.63■□□□□ 0.89
RXRB-202ENST00000374685 POTEDQ86YR6 584 aa20.63■□□□□ 0.89
RXRB-202ENST00000374685 TDRD3Q9H7E2 651 aaKnown RBP20.63■□□□□ 0.89
RXRB-202ENST00000374685 DISC1Q9NRI5 854 aa20.63■□□□□ 0.89
RXRB-202ENST00000374685 GSDMAQ96QA5 445 aa20.63■□□□□ 0.89
RXRB-202ENST00000374685 ADGRF4Q8IZF3 695 aa20.63■□□□□ 0.89
RXRB-202ENST00000374685 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.63■□□□□ 0.89
RXRB-202ENST00000374685 V9GYY5 206 aaPredicted RBP20.63■□□□□ 0.89
RXRB-202ENST00000374685 PPP1R3GB7ZBB8 358 aa20.62■□□□□ 0.89
RXRB-202ENST00000374685 USP17L10C9JJH3 530 aa20.62■□□□□ 0.89
RXRB-202ENST00000374685 ZNF18P17022 549 aa20.62■□□□□ 0.89
RXRB-202ENST00000374685 ARL6IP4Q66PJ3 421 aaKnown RBP20.62■□□□□ 0.89
RXRB-202ENST00000374685 NEK8Q86SG6 692 aa20.62■□□□□ 0.89
RXRB-202ENST00000374685 ELOA2Q8IYF1 753 aaPredicted RBP20.62■□□□□ 0.89
RXRB-202ENST00000374685 RPN1P04843 607 aaKnown RBP20.62■□□□□ 0.89
RXRB-202ENST00000374685 IKQ13123 557 aaPredicted RBP20.62■□□□□ 0.89
RXRB-202ENST00000374685 SYCP1Q15431 976 aa20.62■□□□□ 0.89
RXRB-202ENST00000374685 PODNQ7Z5L7 613 aa20.62■□□□□ 0.89
RXRB-202ENST00000374685 FLAD1Q8NFF5 587 aa20.62■□□□□ 0.89
RXRB-202ENST00000374685 DNAJC18Q9H819 358 aa20.62■□□□□ 0.89
RXRB-202ENST00000374685 TRIM49BA6NDI0 452 aa20.61■□□□□ 0.89
RXRB-202ENST00000374685 TDP2O95551 362 aa20.61■□□□□ 0.89
RXRB-202ENST00000374685 TAL1P17542 331 aaPredicted RBP20.61■□□□□ 0.89
RXRB-202ENST00000374685 KRT25Q7Z3Z0 450 aa20.61■□□□□ 0.89
RXRB-202ENST00000374685 LRRC15Q8TF66 581 aa20.61■□□□□ 0.89
RXRB-202ENST00000374685 NUP88Q99567 741 aaPredicted RBP20.61■□□□□ 0.89
RXRB-202ENST00000374685 CCDC66A2RUB6 948 aa20.61■□□□□ 0.89
RXRB-202ENST00000374685 OR52Z1P0C646 297 aa20.61■□□□□ 0.89
RXRB-202ENST00000374685 CCDC112Q8NEF3 446 aa20.61■□□□□ 0.89
RXRB-202ENST00000374685 VPS16Q9H269 839 aa20.61■□□□□ 0.89
RXRB-202ENST00000374685 GTPBP6O43824 516 aaPredicted RBP20.6■□□□□ 0.89
RXRB-202ENST00000374685 PLCG1P19174 1290 aa20.6■□□□□ 0.89
RXRB-202ENST00000374685 ADCY7P51828 1080 aa20.6■□□□□ 0.89
RXRB-202ENST00000374685 NAALADL2Q58DX5 795 aa20.6■□□□□ 0.89
RXRB-202ENST00000374685 SPATA1Q5VX52 437 aa20.6■□□□□ 0.89
RXRB-202ENST00000374685 PPP1R13BQ96KQ4 1090 aa20.6■□□□□ 0.89
RXRB-202ENST00000374685 JMJD4Q9H9V9 463 aa20.6■□□□□ 0.89
RXRB-202ENST00000374685 PPIP5K2O43314 1243 aa20.6■□□□□ 0.89
RXRB-202ENST00000374685 ERCC5P28715 1186 aaPredicted RBP20.6■□□□□ 0.89
RXRB-202ENST00000374685 HHIPL2Q6UWX4 724 aa20.6■□□□□ 0.89
RXRB-202ENST00000374685 CABP7Q86V35 215 aa20.6■□□□□ 0.89
RXRB-202ENST00000374685 NELFBQ8WX92 580 aa20.6■□□□□ 0.89
RXRB-202ENST00000374685 SUGT1Q9Y2Z0 365 aa20.6■□□□□ 0.89
RXRB-202ENST00000374685 SEPT2Q15019 361 aa20.59■□□□□ 0.89
RXRB-202ENST00000374685 CERKLQ49MI3 558 aaPredicted RBP20.59■□□□□ 0.89
RXRB-202ENST00000374685 SPECC1LQ69YQ0 1117 aa20.59■□□□□ 0.89
RXRB-202ENST00000374685 GALNT17Q6IS24 598 aa20.59■□□□□ 0.89
RXRB-202ENST00000374685 SYT10Q6XYQ8 523 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms