RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 TMTC3Q6ZXV5 915 aa13.21□□□□□ -0.29
HSPG2-202ENST00000374676 RAB11FIP4Q86YS3 637 aa13.21□□□□□ -0.29
HSPG2-202ENST00000374676 RIOX2Q8IUF8 465 aa13.21□□□□□ -0.29
HSPG2-202ENST00000374676 SRBD1Q8N5C6 995 aaKnown RBP13.21□□□□□ -0.29
HSPG2-202ENST00000374676 MOV10L1Q9BXT6 1211 aaKnown RBP13.21□□□□□ -0.29
HSPG2-202ENST00000374676 MROH8Q9H579 483 aa13.21□□□□□ -0.29
HSPG2-202ENST00000374676 JMJD4Q9H9V9 463 aa13.21□□□□□ -0.29
HSPG2-202ENST00000374676 CYTH3O43739 400 aa13.2□□□□□ -0.3
HSPG2-202ENST00000374676 GNRH1P01148 92 aa13.2□□□□□ -0.3
HSPG2-202ENST00000374676 ICAM1P05362 532 aa13.2□□□□□ -0.3
HSPG2-202ENST00000374676 ADD1P35611 737 aaKnown RBP13.2□□□□□ -0.3
HSPG2-202ENST00000374676 PSMC4P43686 418 aa13.2□□□□□ -0.3
HSPG2-202ENST00000374676 PLS1Q14651 629 aa13.2□□□□□ -0.3
HSPG2-202ENST00000374676 TKFCQ3LXA3 575 aa13.2□□□□□ -0.3
HSPG2-202ENST00000374676 SNRNP48Q6IEG0 339 aaKnown RBP13.2□□□□□ -0.3
HSPG2-202ENST00000374676 NBPF11Q86T75 865 aa13.2□□□□□ -0.3
HSPG2-202ENST00000374676 CCDC144CPQ8IYA2 1237 aa13.2□□□□□ -0.3
HSPG2-202ENST00000374676 CPXCR1Q8N123 301 aa13.2□□□□□ -0.3
HSPG2-202ENST00000374676 CD99L2Q8TCZ2 262 aa13.2□□□□□ -0.3
HSPG2-202ENST00000374676 PORCNQ9H237 461 aa13.2□□□□□ -0.3
HSPG2-202ENST00000374676 RAVER2Q9HCJ3 691 aaKnown RBP13.2□□□□□ -0.3
HSPG2-202ENST00000374676 VAT1LQ9HCJ6 419 aa13.2□□□□□ -0.3
HSPG2-202ENST00000374676 TPCN1Q9ULQ1 816 aa13.2□□□□□ -0.3
HSPG2-202ENST00000374676 NAP1L2Q9ULW6 460 aaPredicted RBP13.2□□□□□ -0.3
HSPG2-202ENST00000374676 ZBTB5O15062 677 aa13.19□□□□□ -0.3
HSPG2-202ENST00000374676 DHX16O60231 1041 aaKnown RBP13.19□□□□□ -0.3
HSPG2-202ENST00000374676 PFKFB2O60825 505 aa13.19□□□□□ -0.3
HSPG2-202ENST00000374676 PLEKHA8P1O95397 391 aa13.19□□□□□ -0.3
HSPG2-202ENST00000374676 ERCC3P19447 782 aa13.19□□□□□ -0.3
HSPG2-202ENST00000374676 CTGFP29279 349 aa13.19□□□□□ -0.3
HSPG2-202ENST00000374676 CDC27P30260 824 aa13.19□□□□□ -0.3
HSPG2-202ENST00000374676 FCGRTP55899 365 aa13.19□□□□□ -0.3
HSPG2-202ENST00000374676 SNAP25P60880 206 aa13.19□□□□□ -0.3
HSPG2-202ENST00000374676 FUT2Q10981 343 aa13.19□□□□□ -0.3
HSPG2-202ENST00000374676 CDC37Q16543 378 aaPredicted RBP13.19□□□□□ -0.3
HSPG2-202ENST00000374676 QRICH1Q2TAL8 776 aa13.19□□□□□ -0.3
HSPG2-202ENST00000374676 CCDC174Q6PII3 467 aa13.19□□□□□ -0.3
HSPG2-202ENST00000374676 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.19□□□□□ -0.3
HSPG2-202ENST00000374676 CCAR1Q8IX12 1150 aaKnown RBP13.19□□□□□ -0.3
HSPG2-202ENST00000374676 CHST13Q8NET6 341 aa13.19□□□□□ -0.3
HSPG2-202ENST00000374676 TRIM47Q96LD4 638 aa13.19□□□□□ -0.3
HSPG2-202ENST00000374676 AGBL1Q96MI9 1066 aa13.19□□□□□ -0.3
HSPG2-202ENST00000374676 LARP6Q9BRS8 491 aaKnown RBP13.19□□□□□ -0.3
HSPG2-202ENST00000374676 ARHGAP39Q9C0H5 1083 aa13.19□□□□□ -0.3
HSPG2-202ENST00000374676 EFCC1Q9HA90 598 aa13.19□□□□□ -0.3
HSPG2-202ENST00000374676 PNMA6FA0A0J9YX94 578 aa13.18□□□□□ -0.3
HSPG2-202ENST00000374676 STRNO43815 780 aa13.18□□□□□ -0.3
HSPG2-202ENST00000374676 ST18O60284 1047 aa13.18□□□□□ -0.3
HSPG2-202ENST00000374676 FMNL1O95466 1100 aaPredicted RBP13.18□□□□□ -0.3
HSPG2-202ENST00000374676 HOXD10P28358 340 aa13.18□□□□□ -0.3
HSPG2-202ENST00000374676 CAP1Q01518 475 aa13.18□□□□□ -0.3
HSPG2-202ENST00000374676 TRAF1Q13077 416 aa13.18□□□□□ -0.3
HSPG2-202ENST00000374676 NTRK3Q16288 839 aa13.18□□□□□ -0.3
HSPG2-202ENST00000374676 GPR142Q7Z601 462 aa13.18□□□□□ -0.3
HSPG2-202ENST00000374676 PLEKHH3Q7Z736 793 aa13.18□□□□□ -0.3
HSPG2-202ENST00000374676 COA7Q96BR5 231 aa13.18□□□□□ -0.3
HSPG2-202ENST00000374676 ZSCAN31Q96LW9 406 aaPredicted RBP13.18□□□□□ -0.3
HSPG2-202ENST00000374676 PIGSQ96S52 555 aa13.18□□□□□ -0.3
HSPG2-202ENST00000374676 FBXO40Q9UH90 709 aa13.18□□□□□ -0.3
HSPG2-202ENST00000374676 LIMCH1Q9UPQ0 1083 aa13.18□□□□□ -0.3
HSPG2-202ENST00000374676 RIPK3Q9Y572 518 aa13.18□□□□□ -0.3
HSPG2-202ENST00000374676 ZSWIM8A7E2V4 1837 aa13.18□□□□□ -0.3
HSPG2-202ENST00000374676 SLC15A5A6NIM6 579 aa13.17□□□□□ -0.3
HSPG2-202ENST00000374676 TNPO2O14787 897 aaKnown RBP13.17□□□□□ -0.3
HSPG2-202ENST00000374676 IFNAR1P17181 557 aa13.17□□□□□ -0.3
HSPG2-202ENST00000374676 PRMT2P55345 433 aa13.17□□□□□ -0.3
HSPG2-202ENST00000374676 CCT2P78371 535 aaKnown RBP13.17□□□□□ -0.3
HSPG2-202ENST00000374676 ME3Q16798 604 aa13.17□□□□□ -0.3
HSPG2-202ENST00000374676 NCAPG2Q86XI2 1143 aa13.17□□□□□ -0.3
HSPG2-202ENST00000374676 FBXO11Q86XK2 927 aa13.17□□□□□ -0.3
HSPG2-202ENST00000374676 ABRAQ8N0Z2 381 aa13.17□□□□□ -0.3
HSPG2-202ENST00000374676 CMTR1Q8N1G2 835 aaKnown RBP13.17□□□□□ -0.3
HSPG2-202ENST00000374676 RRP36Q96EU6 259 aaKnown RBP13.17□□□□□ -0.3
HSPG2-202ENST00000374676 AMNQ9BXJ7 453 aa13.17□□□□□ -0.3
HSPG2-202ENST00000374676 MAF1Q9H063 256 aa13.17□□□□□ -0.3
HSPG2-202ENST00000374676 SLKQ9H2G2 1235 aaPredicted RBP13.17□□□□□ -0.3
HSPG2-202ENST00000374676 GJD2Q9UKL4 321 aa13.17□□□□□ -0.3
HSPG2-202ENST00000374676 CCPG1Q9ULG6 757 aa13.17□□□□□ -0.3
HSPG2-202ENST00000374676 ABCB11O95342 1321 aa13.16□□□□□ -0.3
HSPG2-202ENST00000374676 CNTNAP5Q8WYK1 1306 aa13.16□□□□□ -0.3
HSPG2-202ENST00000374676 PLXNB2O15031 1838 aa13.16□□□□□ -0.3
HSPG2-202ENST00000374676 ALAS1P13196 640 aa13.16□□□□□ -0.3
HSPG2-202ENST00000374676 PTPREP23469 700 aa13.16□□□□□ -0.3
HSPG2-202ENST00000374676 MCM2P49736 904 aa13.16□□□□□ -0.3
HSPG2-202ENST00000374676 SCRN1Q12765 414 aa13.16□□□□□ -0.3
HSPG2-202ENST00000374676 GRB14Q14449 540 aa13.16□□□□□ -0.3
HSPG2-202ENST00000374676 MORN1Q5T089 497 aa13.16□□□□□ -0.3
HSPG2-202ENST00000374676 CPLX2Q6PUV4 134 aaKnown RBP13.16□□□□□ -0.3
HSPG2-202ENST00000374676 OTOP1Q7RTM1 612 aa13.16□□□□□ -0.3
HSPG2-202ENST00000374676 CTU1Q7Z7A3 348 aaKnown RBP13.16□□□□□ -0.3
HSPG2-202ENST00000374676 HOMER1Q86YM7 354 aa13.16□□□□□ -0.3
HSPG2-202ENST00000374676 CCDC82Q8N4S0 544 aa13.16□□□□□ -0.3
HSPG2-202ENST00000374676 USP6NLQ92738 828 aa13.16□□□□□ -0.3
HSPG2-202ENST00000374676 TRERF1Q96PN7 1200 aa13.16□□□□□ -0.3
HSPG2-202ENST00000374676 ACAD9Q9H845 621 aa13.16□□□□□ -0.3
HSPG2-202ENST00000374676 NCOA5Q9HCD5 579 aaKnown RBP13.16□□□□□ -0.3
HSPG2-202ENST00000374676 CWC22Q9HCG8 908 aaKnown RBP13.16□□□□□ -0.3
HSPG2-202ENST00000374676 RNF146Q9NTX7 359 aa13.16□□□□□ -0.3
HSPG2-202ENST00000374676 RBM27Q9P2N5 1060 aaKnown RBP13.16□□□□□ -0.3
HSPG2-202ENST00000374676 SRRDQ9UH36 339 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms