RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 CYTH3O43739 400 aa17.45■□□□□ 0.38
HSPG2-201ENST00000374673 DHX16O60231 1041 aaKnown RBP17.45■□□□□ 0.38
HSPG2-201ENST00000374673 PLEKHA8P1O95397 391 aa17.45■□□□□ 0.38
HSPG2-201ENST00000374673 SLC25A27O95847 323 aa17.45■□□□□ 0.38
HSPG2-201ENST00000374673 ICAM1P05362 532 aa17.45■□□□□ 0.38
HSPG2-201ENST00000374673 CDC27P30260 824 aa17.45■□□□□ 0.38
HSPG2-201ENST00000374673 COPB2P35606 906 aa17.45■□□□□ 0.38
HSPG2-201ENST00000374673 PLS1Q14651 629 aa17.45■□□□□ 0.38
HSPG2-201ENST00000374673 CDC37Q16543 378 aaPredicted RBP17.45■□□□□ 0.38
HSPG2-201ENST00000374673 CPXCR1Q8N123 301 aa17.45■□□□□ 0.38
HSPG2-201ENST00000374673 SRBD1Q8N5C6 995 aaKnown RBP17.45■□□□□ 0.38
HSPG2-201ENST00000374673 CD99L2Q8TCZ2 262 aa17.45■□□□□ 0.38
HSPG2-201ENST00000374673 LARP6Q9BRS8 491 aaKnown RBP17.45■□□□□ 0.38
HSPG2-201ENST00000374673 PORCNQ9H237 461 aa17.45■□□□□ 0.38
HSPG2-201ENST00000374673 PRDM10Q9NQV6 1147 aa17.45■□□□□ 0.38
HSPG2-201ENST00000374673 PNMA2Q9UL42 364 aa17.45■□□□□ 0.38
HSPG2-201ENST00000374673 SMCHD1A6NHR9 2005 aa17.45■□□□□ 0.38
HSPG2-201ENST00000374673 ZNF236Q9UL36 1845 aa17.44■□□□□ 0.38
HSPG2-201ENST00000374673 DOCK3Q8IZD9 2030 aa17.44■□□□□ 0.38
HSPG2-201ENST00000374673 CCDC196A0A1B0GTZ2 297 aa17.44■□□□□ 0.38
HSPG2-201ENST00000374673 CTGFP29279 349 aa17.44■□□□□ 0.38
HSPG2-201ENST00000374673 MAPK4P31152 587 aa17.44■□□□□ 0.38
HSPG2-201ENST00000374673 PSMC4P43686 418 aa17.44■□□□□ 0.38
HSPG2-201ENST00000374673 FCGRTP55899 365 aa17.44■□□□□ 0.38
HSPG2-201ENST00000374673 SNAP25P60880 206 aa17.44■□□□□ 0.38
HSPG2-201ENST00000374673 CAP1Q01518 475 aa17.44■□□□□ 0.38
HSPG2-201ENST00000374673 SNRNP48Q6IEG0 339 aaKnown RBP17.44■□□□□ 0.38
HSPG2-201ENST00000374673 CCDC174Q6PII3 467 aa17.44■□□□□ 0.38
HSPG2-201ENST00000374673 ARHGAP39Q9C0H5 1083 aa17.44■□□□□ 0.38
HSPG2-201ENST00000374673 EFCC1Q9HA90 598 aa17.44■□□□□ 0.38
HSPG2-201ENST00000374673 VAT1LQ9HCJ6 419 aa17.44■□□□□ 0.38
HSPG2-201ENST00000374673 TPCN1Q9ULQ1 816 aa17.44■□□□□ 0.38
HSPG2-201ENST00000374673 BAZ2BQ9UIF8 2168 aaKnown RBP17.44■□□□□ 0.38
HSPG2-201ENST00000374673 CNTNAP5Q8WYK1 1306 aa17.44■□□□□ 0.38
HSPG2-201ENST00000374673 ZBTB5O15062 677 aa17.43■□□□□ 0.38
HSPG2-201ENST00000374673 GNRH1P01148 92 aa17.43■□□□□ 0.38
HSPG2-201ENST00000374673 ERCC3P19447 782 aa17.43■□□□□ 0.38
HSPG2-201ENST00000374673 ARHGEF6Q15052 776 aa17.43■□□□□ 0.38
HSPG2-201ENST00000374673 QRICH1Q2TAL8 776 aa17.43■□□□□ 0.38
HSPG2-201ENST00000374673 TKFCQ3LXA3 575 aa17.43■□□□□ 0.38
HSPG2-201ENST00000374673 AGBL1Q96MI9 1066 aa17.43■□□□□ 0.38
HSPG2-201ENST00000374673 MROH8Q9H579 483 aa17.43■□□□□ 0.38
HSPG2-201ENST00000374673 RBBP6Q7Z6E9 1792 aaKnown RBP17.43■□□□□ 0.38
HSPG2-201ENST00000374673 ZNFX1Q9P2E3 1918 aaKnown RBP17.43■□□□□ 0.38
HSPG2-201ENST00000374673 TNPO2O14787 897 aaKnown RBP17.42■□□□□ 0.38
HSPG2-201ENST00000374673 ST18O60284 1047 aa17.42■□□□□ 0.38
HSPG2-201ENST00000374673 PFKFB2O60825 505 aa17.42■□□□□ 0.38
HSPG2-201ENST00000374673 ADD1P35611 737 aaKnown RBP17.42■□□□□ 0.38
HSPG2-201ENST00000374673 CCT2P78371 535 aaKnown RBP17.42■□□□□ 0.38
HSPG2-201ENST00000374673 FUT2Q10981 343 aa17.42■□□□□ 0.38
HSPG2-201ENST00000374673 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.42■□□□□ 0.38
HSPG2-201ENST00000374673 GPR142Q7Z601 462 aa17.42■□□□□ 0.38
HSPG2-201ENST00000374673 NCAPG2Q86XI2 1143 aa17.42■□□□□ 0.38
HSPG2-201ENST00000374673 CCAR1Q8IX12 1150 aaKnown RBP17.42■□□□□ 0.38
HSPG2-201ENST00000374673 CMTR1Q8N1G2 835 aaKnown RBP17.42■□□□□ 0.38
HSPG2-201ENST00000374673 TRIM47Q96LD4 638 aa17.42■□□□□ 0.38
HSPG2-201ENST00000374673 PIGSQ96S52 555 aa17.42■□□□□ 0.38
HSPG2-201ENST00000374673 SLKQ9H2G2 1235 aaPredicted RBP17.42■□□□□ 0.38
HSPG2-201ENST00000374673 CCPG1Q9ULG6 757 aa17.42■□□□□ 0.38
HSPG2-201ENST00000374673 RIPK3Q9Y572 518 aa17.42■□□□□ 0.38
HSPG2-201ENST00000374673 FMNL1O95466 1100 aaPredicted RBP17.41■□□□□ 0.38
HSPG2-201ENST00000374673 NTRK3Q16288 839 aa17.41■□□□□ 0.38
HSPG2-201ENST00000374673 ME3Q16798 604 aa17.41■□□□□ 0.38
HSPG2-201ENST00000374673 NOL8Q76FK4 1167 aaKnown RBP17.41■□□□□ 0.38
HSPG2-201ENST00000374673 PLEKHH3Q7Z736 793 aa17.41■□□□□ 0.38
HSPG2-201ENST00000374673 HOMER1Q86YM7 354 aa17.41■□□□□ 0.38
HSPG2-201ENST00000374673 CHST13Q8NET6 341 aa17.41■□□□□ 0.38
HSPG2-201ENST00000374673 RRP36Q96EU6 259 aaKnown RBP17.41■□□□□ 0.38
HSPG2-201ENST00000374673 FBXO40Q9UH90 709 aa17.41■□□□□ 0.38
HSPG2-201ENST00000374673 LIMCH1Q9UPQ0 1083 aa17.41■□□□□ 0.38
HSPG2-201ENST00000374673 PNMA6FA0A0J9YX94 578 aa17.4■□□□□ 0.38
HSPG2-201ENST00000374673 ECM2O94769 699 aaPredicted RBP17.4■□□□□ 0.38
HSPG2-201ENST00000374673 LARGE1O95461 756 aa17.4■□□□□ 0.38
HSPG2-201ENST00000374673 ALAS1P13196 640 aa17.4■□□□□ 0.38
HSPG2-201ENST00000374673 HOXD10P28358 340 aa17.4■□□□□ 0.38
HSPG2-201ENST00000374673 SCRN1Q12765 414 aa17.4■□□□□ 0.38
HSPG2-201ENST00000374673 STK3Q13188 491 aa17.4■□□□□ 0.38
HSPG2-201ENST00000374673 WDR78Q5VTH9 848 aa17.4■□□□□ 0.38
HSPG2-201ENST00000374673 FBXO11Q86XK2 927 aa17.4■□□□□ 0.38
HSPG2-201ENST00000374673 CCDC82Q8N4S0 544 aa17.4■□□□□ 0.38
HSPG2-201ENST00000374673 COA7Q96BR5 231 aa17.4■□□□□ 0.38
HSPG2-201ENST00000374673 AMNQ9BXJ7 453 aa17.4■□□□□ 0.38
HSPG2-201ENST00000374673 NCOA5Q9HCD5 579 aaKnown RBP17.4■□□□□ 0.38
HSPG2-201ENST00000374673 RNF146Q9NTX7 359 aa17.4■□□□□ 0.38
HSPG2-201ENST00000374673 STRNO43815 780 aa17.39■□□□□ 0.37
HSPG2-201ENST00000374673 PPP1R11O60927 126 aaPredicted RBP17.39■□□□□ 0.37
HSPG2-201ENST00000374673 IFNAR1P17181 557 aa17.39■□□□□ 0.37
HSPG2-201ENST00000374673 PTPREP23469 700 aa17.39■□□□□ 0.37
HSPG2-201ENST00000374673 SLC4A3P48751 1232 aa17.39■□□□□ 0.37
HSPG2-201ENST00000374673 PRMT2P55345 433 aa17.39■□□□□ 0.37
HSPG2-201ENST00000374673 TRAF1Q13077 416 aa17.39■□□□□ 0.37
HSPG2-201ENST00000374673 OTOP1Q7RTM1 612 aa17.39■□□□□ 0.37
HSPG2-201ENST00000374673 CTU1Q7Z7A3 348 aaKnown RBP17.39■□□□□ 0.37
HSPG2-201ENST00000374673 ABRAQ8N0Z2 381 aa17.39■□□□□ 0.37
HSPG2-201ENST00000374673 SOCS4Q8WXH5 440 aa17.39■□□□□ 0.37
HSPG2-201ENST00000374673 ZSCAN31Q96LW9 406 aaPredicted RBP17.39■□□□□ 0.37
HSPG2-201ENST00000374673 TRERF1Q96PN7 1200 aa17.39■□□□□ 0.37
HSPG2-201ENST00000374673 ACAD9Q9H845 621 aa17.39■□□□□ 0.37
HSPG2-201ENST00000374673 CWC22Q9HCG8 908 aaKnown RBP17.39■□□□□ 0.37
HSPG2-201ENST00000374673 SEC63Q9UGP8 760 aaKnown RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms