RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 CUEDC2Q9H467 287 aa20.17■□□□□ 0.82
PHF1-201ENST00000374512 ZCCHC17Q9NP64 241 aaKnown RBP20.17■□□□□ 0.82
PHF1-201ENST00000374512 LUC7L2Q9Y383 392 aaKnown RBP20.17■□□□□ 0.82
PHF1-201ENST00000374512 TSPY2A6NKD2 308 aa20.17■□□□□ 0.82
PHF1-201ENST00000374512 PSMD14O00487 310 aa20.17■□□□□ 0.82
PHF1-201ENST00000374512 MCM3P25205 808 aa20.17■□□□□ 0.82
PHF1-201ENST00000374512 WDR93Q6P2C0 686 aa20.17■□□□□ 0.82
PHF1-201ENST00000374512 DAGLBQ8NCG7 672 aa20.17■□□□□ 0.82
PHF1-201ENST00000374512 EHBP1Q8NDI1 1231 aa20.17■□□□□ 0.82
PHF1-201ENST00000374512 CCDC148Q8NFR7 591 aa20.17■□□□□ 0.82
PHF1-201ENST00000374512 CCSER1Q9C0I3 900 aa20.17■□□□□ 0.82
PHF1-201ENST00000374512 CAPN11Q9UMQ6 739 aa20.17■□□□□ 0.82
PHF1-201ENST00000374512 EVX2Q03828 476 aa20.16■□□□□ 0.82
PHF1-201ENST00000374512 SPTY2D1Q68D10 685 aaPredicted RBP20.16■□□□□ 0.82
PHF1-201ENST00000374512 IRF2BP1Q8IU81 584 aa20.16■□□□□ 0.82
PHF1-201ENST00000374512 ARHGEF1Q92888 912 aaKnown RBP20.16■□□□□ 0.82
PHF1-201ENST00000374512 PNKPQ96T60 521 aa20.16■□□□□ 0.82
PHF1-201ENST00000374512 KAT14Q9H8E8 782 aa20.16■□□□□ 0.82
PHF1-201ENST00000374512 ADAM21Q9UKJ8 722 aa20.16■□□□□ 0.82
PHF1-201ENST00000374512 RNF225M0QZC1 329 aaPredicted RBP20.15■□□□□ 0.82
PHF1-201ENST00000374512 PSMA7O14818 248 aa20.15■□□□□ 0.82
PHF1-201ENST00000374512 PRPHP41219 470 aa20.15■□□□□ 0.82
PHF1-201ENST00000374512 KRT83P78385 493 aa20.15■□□□□ 0.82
PHF1-201ENST00000374512 ST5P78524 1137 aa20.15■□□□□ 0.82
PHF1-201ENST00000374512 RCSD1Q6JBY9 416 aa20.15■□□□□ 0.82
PHF1-201ENST00000374512 RETREG2Q8NC44 543 aa20.15■□□□□ 0.82
PHF1-201ENST00000374512 ZNF507Q8TCN5 953 aa20.15■□□□□ 0.82
PHF1-201ENST00000374512 RPGRIP1Q96KN7 1286 aa20.15■□□□□ 0.82
PHF1-201ENST00000374512 SLF1Q9BQI6 1058 aa20.15■□□□□ 0.82
PHF1-201ENST00000374512 NUP58Q9BVL2 599 aa20.15■□□□□ 0.82
PHF1-201ENST00000374512 ACBD3Q9H3P7 528 aa20.15■□□□□ 0.82
PHF1-201ENST00000374512 BAZ2BQ9UIF8 2168 aaKnown RBP20.15■□□□□ 0.82
PHF1-201ENST00000374512 RHOBTB3O94955 611 aa20.15■□□□□ 0.82
PHF1-201ENST00000374512 CYP2D6P10635 497 aa20.15■□□□□ 0.82
PHF1-201ENST00000374512 PPP1R2P41236 205 aa20.15■□□□□ 0.82
PHF1-201ENST00000374512 DNM2P50570 870 aa20.15■□□□□ 0.82
PHF1-201ENST00000374512 DZIP1Q86YF9 867 aaKnown RBP20.15■□□□□ 0.82
PHF1-201ENST00000374512 SBF2Q86WG5 1849 aa20.15■□□□□ 0.82
PHF1-201ENST00000374512 CCDC194A0A1B0GVG4 234 aa20.14■□□□□ 0.81
PHF1-201ENST00000374512 M0R2N6 131 aa20.14■□□□□ 0.81
PHF1-201ENST00000374512 GIMAP8Q8ND71 665 aaPredicted RBP20.14■□□□□ 0.81
PHF1-201ENST00000374512 DHTKD1Q96HY7 919 aaPredicted RBP20.14■□□□□ 0.81
PHF1-201ENST00000374512 KBTBD4Q9NVX7 518 aa20.14■□□□□ 0.81
PHF1-201ENST00000374512 MCM9Q9NXL9 1143 aa20.14■□□□□ 0.81
PHF1-201ENST00000374512 MAGEC2Q9UBF1 373 aaPredicted RBP20.14■□□□□ 0.81
PHF1-201ENST00000374512 GDAQ9Y2T3 454 aa20.14■□□□□ 0.81
PHF1-201ENST00000374512 TTC26A0AVF1 554 aa20.14■□□□□ 0.81
PHF1-201ENST00000374512 CDC25AP30304 524 aa20.14■□□□□ 0.81
PHF1-201ENST00000374512 FAM182BQ5T319 152 aa20.14■□□□□ 0.81
PHF1-201ENST00000374512 ABCB6Q9NP58 842 aa20.14■□□□□ 0.81
PHF1-201ENST00000374512 TULP2O00295 520 aa20.13■□□□□ 0.81
PHF1-201ENST00000374512 UBA7P41226 1012 aa20.13■□□□□ 0.81
PHF1-201ENST00000374512 MEA1Q16626 185 aa20.13■□□□□ 0.81
PHF1-201ENST00000374512 NAALADL2Q58DX5 795 aa20.13■□□□□ 0.81
PHF1-201ENST00000374512 TRAPPC11Q7Z392 1133 aa20.13■□□□□ 0.81
PHF1-201ENST00000374512 IQCDQ96DY2 449 aa20.13■□□□□ 0.81
PHF1-201ENST00000374512 AK8Q96MA6 479 aa20.13■□□□□ 0.81
PHF1-201ENST00000374512 TSPYL1Q9H0U9 437 aa20.13■□□□□ 0.81
PHF1-201ENST00000374512 CWC15Q9P013 229 aaKnown RBP20.13■□□□□ 0.81
PHF1-201ENST00000374512 H3BQF6 201 aa20.12■□□□□ 0.81
PHF1-201ENST00000374512 GRM4Q14833 912 aa20.12■□□□□ 0.81
PHF1-201ENST00000374512 TXNRD3Q86VQ6 643 aa20.12■□□□□ 0.81
PHF1-201ENST00000374512 CCDC47Q96A33 483 aaKnown RBP20.12■□□□□ 0.81
PHF1-201ENST00000374512 CHP1Q99653 195 aa20.12■□□□□ 0.81
PHF1-201ENST00000374512 IRS2Q9Y4H2 1338 aa20.12■□□□□ 0.81
PHF1-201ENST00000374512 TM4SF1P30408 202 aa20.12■□□□□ 0.81
PHF1-201ENST00000374512 MCM6Q14566 821 aa20.12■□□□□ 0.81
PHF1-201ENST00000374512 AMIGO3Q86WK7 504 aa20.12■□□□□ 0.81
PHF1-201ENST00000374512 CCDC24Q8N4L8 307 aa20.12■□□□□ 0.81
PHF1-201ENST00000374512 NEK11Q8NG66 645 aa20.12■□□□□ 0.81
PHF1-201ENST00000374512 GOLGA5Q8TBA6 731 aa20.12■□□□□ 0.81
PHF1-201ENST00000374512 VIPAS39Q9H9C1 493 aa20.12■□□□□ 0.81
PHF1-201ENST00000374512 PDE11AQ9HCR9 933 aa20.12■□□□□ 0.81
PHF1-201ENST00000374512 REXO2Q9Y3B8 237 aaKnown RBP20.12■□□□□ 0.81
PHF1-201ENST00000374512 BICDL2A1A5D9 508 aa20.11■□□□□ 0.81
PHF1-201ENST00000374512 KLRC4O43908 158 aa20.11■□□□□ 0.81
PHF1-201ENST00000374512 COBLO75128 1261 aa20.11■□□□□ 0.81
PHF1-201ENST00000374512 ABL1P00519 1130 aa20.11■□□□□ 0.81
PHF1-201ENST00000374512 SRGNP10124 158 aa20.11■□□□□ 0.81
PHF1-201ENST00000374512 VSNL1P62760 191 aa20.11■□□□□ 0.81
PHF1-201ENST00000374512 PAPD7Q5XG87 772 aaKnown RBP20.11■□□□□ 0.81
PHF1-201ENST00000374512 FAM114A1Q8IWE2 563 aa20.11■□□□□ 0.81
PHF1-201ENST00000374512 CCDC170Q8IYT3 715 aa20.11■□□□□ 0.81
PHF1-201ENST00000374512 PNMA1Q8ND90 353 aa20.11■□□□□ 0.81
PHF1-201ENST00000374512 LZTS2Q9BRK4 669 aa20.11■□□□□ 0.81
PHF1-201ENST00000374512 MED4Q9NPJ6 270 aa20.11■□□□□ 0.81
PHF1-201ENST00000374512 TCP11L1Q9NUJ3 509 aa20.11■□□□□ 0.81
PHF1-201ENST00000374512 KRT86O43790 486 aa20.11■□□□□ 0.81
PHF1-201ENST00000374512 RHOXF2BP0C7M4 288 aa20.11■□□□□ 0.81
PHF1-201ENST00000374512 VEGFAP15692 232 aaPredicted RBP20.11■□□□□ 0.81
PHF1-201ENST00000374512 RFC4P35249 363 aa20.11■□□□□ 0.81
PHF1-201ENST00000374512 CYLC1P35663 651 aaPredicted RBP20.11■□□□□ 0.81
PHF1-201ENST00000374512 RASSF8Q8NHQ8 419 aa20.11■□□□□ 0.81
PHF1-201ENST00000374512 GJD4Q96KN9 370 aaPredicted RBP20.11■□□□□ 0.81
PHF1-201ENST00000374512 TRIM47Q96LD4 638 aa20.11■□□□□ 0.81
PHF1-201ENST00000374512 RHOXF2Q9BQY4 288 aa20.11■□□□□ 0.81
PHF1-201ENST00000374512 ZNHIT6Q9NWK9 470 aaKnown RBP20.11■□□□□ 0.81
PHF1-201ENST00000374512 JAG2Q9Y219 1238 aa20.11■□□□□ 0.81
PHF1-201ENST00000374512 FAM205AQ6ZU69 1335 aa20.1■□□□□ 0.81
PHF1-201ENST00000374512 USP17L8P0C7I0 530 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms