RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 CUL4BQ13620 913 aa14.3□□□□□ -0.12
PRPF4-202ENST00000374199 SPECC1Q5M775 1068 aa14.3□□□□□ -0.12
PRPF4-202ENST00000374199 CNNM4Q6P4Q7 775 aa14.3□□□□□ -0.12
PRPF4-202ENST00000374199 CLEC10AQ8IUN9 316 aa14.3□□□□□ -0.12
PRPF4-202ENST00000374199 PIBF1Q8WXW3 757 aa14.3□□□□□ -0.12
PRPF4-202ENST00000374199 TDRD3Q9H7E2 651 aaKnown RBP14.3□□□□□ -0.12
PRPF4-202ENST00000374199 ERCC5P28715 1186 aaPredicted RBP14.3□□□□□ -0.12
PRPF4-202ENST00000374199 SF3B2Q13435 895 aaKnown RBP14.3□□□□□ -0.12
PRPF4-202ENST00000374199 SHROOM1Q2M3G4 852 aaPredicted RBP14.3□□□□□ -0.12
PRPF4-202ENST00000374199 AOPEPQ8N6M6 819 aa14.3□□□□□ -0.12
PRPF4-202ENST00000374199 CPVLQ9H3G5 476 aa14.3□□□□□ -0.12
PRPF4-202ENST00000374199 RLFQ13129 1914 aa14.3□□□□□ -0.12
PRPF4-202ENST00000374199 SMTNL1A8MU46 457 aa14.3□□□□□ -0.12
PRPF4-202ENST00000374199 NONOQ15233 471 aaKnown RBP eCLIP14.3□□□□□ -0.12
PRPF4-202ENST00000374199 ENOX1Q8TC92 643 aaKnown RBP14.3□□□□□ -0.12
PRPF4-202ENST00000374199 MAGEF1Q9HAY2 307 aa14.3□□□□□ -0.12
PRPF4-202ENST00000374199 PIM2Q9P1W9 311 aa14.3□□□□□ -0.12
PRPF4-202ENST00000374199 CYP3A7-CYP3A51PA0A087WV96 503 aa14.29□□□□□ -0.12
PRPF4-202ENST00000374199 CYP3A7P24462 503 aa14.29□□□□□ -0.12
PRPF4-202ENST00000374199 FXR2P51116 673 aaKnown RBP eCLIP14.29□□□□□ -0.12
PRPF4-202ENST00000374199 CACNB3P54284 484 aa14.29□□□□□ -0.12
PRPF4-202ENST00000374199 LRRC15Q8TF66 581 aa14.29□□□□□ -0.12
PRPF4-202ENST00000374199 SEC63Q9UGP8 760 aaKnown RBP14.29□□□□□ -0.12
PRPF4-202ENST00000374199 CD2APQ9Y5K6 639 aa14.29□□□□□ -0.12
PRPF4-202ENST00000374199 NFKBIEO00221 500 aa14.29□□□□□ -0.12
PRPF4-202ENST00000374199 SLC26A4O43511 780 aa14.29□□□□□ -0.12
PRPF4-202ENST00000374199 SLURP2P0DP57 97 aa14.29□□□□□ -0.12
PRPF4-202ENST00000374199 NAPAP54920 295 aa14.29□□□□□ -0.12
PRPF4-202ENST00000374199 COBLL1Q53SF7 1204 aa14.29□□□□□ -0.12
PRPF4-202ENST00000374199 RASGRP4Q8TDF6 673 aa14.29□□□□□ -0.12
PRPF4-202ENST00000374199 DEFB129Q9H1M3 183 aa14.29□□□□□ -0.12
PRPF4-202ENST00000374199 KBTBD4Q9NVX7 518 aa14.29□□□□□ -0.12
PRPF4-202ENST00000374199 IMPACTQ9P2X3 320 aa14.29□□□□□ -0.12
PRPF4-202ENST00000374199 FRMPD2Q68DX3 1309 aaPredicted RBP14.29□□□□□ -0.12
PRPF4-202ENST00000374199 MOXD1Q6UVY6 613 aa14.28□□□□□ -0.12
PRPF4-202ENST00000374199 NEK8Q86SG6 692 aa14.28□□□□□ -0.12
PRPF4-202ENST00000374199 KIAA1524Q8TCG1 905 aa14.28□□□□□ -0.12
PRPF4-202ENST00000374199 GLT8D2Q9H1C3 349 aa14.28□□□□□ -0.12
PRPF4-202ENST00000374199 CUEDC2Q9H467 287 aa14.28□□□□□ -0.12
PRPF4-202ENST00000374199 ZNF277Q9NRM2 450 aaPredicted RBP14.28□□□□□ -0.12
PRPF4-202ENST00000374199 WDR90Q96KV7 1748 aa14.28□□□□□ -0.12
PRPF4-202ENST00000374199 CCDC194A0A1B0GVG4 234 aa14.28□□□□□ -0.12
PRPF4-202ENST00000374199 OFD1O75665 1012 aa14.28□□□□□ -0.12
PRPF4-202ENST00000374199 MYL5Q02045 173 aa14.28□□□□□ -0.12
PRPF4-202ENST00000374199 INF2Q27J81 1249 aa14.28□□□□□ -0.12
PRPF4-202ENST00000374199 APTXQ7Z2E3 356 aaKnown RBP14.28□□□□□ -0.12
PRPF4-202ENST00000374199 DISC1Q9NRI5 854 aa14.28□□□□□ -0.12
PRPF4-202ENST00000374199 MCM7P33993 719 aa14.28□□□□□ -0.12
PRPF4-202ENST00000374199 REXO1Q8N1G1 1221 aaKnown RBP14.28□□□□□ -0.12
PRPF4-202ENST00000374199 UBA5Q9GZZ9 404 aa14.28□□□□□ -0.12
PRPF4-202ENST00000374199 VWA3AA6NCI4 1184 aa14.27□□□□□ -0.12
PRPF4-202ENST00000374199 RPS12P25398 132 aaKnown RBP14.27□□□□□ -0.12
PRPF4-202ENST00000374199 PTGER2P43116 358 aa14.27□□□□□ -0.12
PRPF4-202ENST00000374199 ABCB5Q2M3G0 1257 aa14.27□□□□□ -0.12
PRPF4-202ENST00000374199 TTBK2Q6IQ55 1244 aa14.27□□□□□ -0.12
PRPF4-202ENST00000374199 IQUBQ8NA54 791 aa14.27□□□□□ -0.12
PRPF4-202ENST00000374199 MMTAG2Q9BU76 263 aaKnown RBP14.27□□□□□ -0.12
PRPF4-202ENST00000374199 ADCY7P51828 1080 aa14.27□□□□□ -0.13
PRPF4-202ENST00000374199 CXCL9Q07325 125 aa14.27□□□□□ -0.13
PRPF4-202ENST00000374199 SEPT2Q15019 361 aa14.27□□□□□ -0.13
PRPF4-202ENST00000374199 CCDC144BQ3MJ40 725 aa14.27□□□□□ -0.13
PRPF4-202ENST00000374199 TMX2Q9Y320 296 aa14.27□□□□□ -0.13
PRPF4-202ENST00000374199 A0A1W2PRG0 241 aa14.26□□□□□ -0.13
PRPF4-202ENST00000374199 PPP1R3GB7ZBB8 358 aa14.26□□□□□ -0.13
PRPF4-202ENST00000374199 GTPBP6O43824 516 aaPredicted RBP14.26□□□□□ -0.13
PRPF4-202ENST00000374199 TERF1P54274 439 aa14.26□□□□□ -0.13
PRPF4-202ENST00000374199 KCNB1Q14721 858 aa14.26□□□□□ -0.13
PRPF4-202ENST00000374199 MCTP2Q6DN12 878 aa14.26□□□□□ -0.13
PRPF4-202ENST00000374199 SMARCE1Q969G3 411 aa14.26□□□□□ -0.13
PRPF4-202ENST00000374199 TEPSINQ96N21 525 aa14.26□□□□□ -0.13
PRPF4-202ENST00000374199 GOLGA6L6A8MZA4 724 aa14.26□□□□□ -0.13
PRPF4-202ENST00000374199 GOLGA6L19H0YKK7 550 aa14.26□□□□□ -0.13
PRPF4-202ENST00000374199 PIK3CDO00329 1044 aa14.26□□□□□ -0.13
PRPF4-202ENST00000374199 OR52Z1P0C646 297 aa14.26□□□□□ -0.13
PRPF4-202ENST00000374199 GHRHRQ02643 423 aa14.26□□□□□ -0.13
PRPF4-202ENST00000374199 ICA1Q05084 483 aa14.26□□□□□ -0.13
PRPF4-202ENST00000374199 FMR1Q06787 632 aaKnown RBP eCLIP14.26□□□□□ -0.13
PRPF4-202ENST00000374199 PDIA5Q14554 519 aa14.26□□□□□ -0.13
PRPF4-202ENST00000374199 HYIQ5T013 277 aa14.26□□□□□ -0.13
PRPF4-202ENST00000374199 CDKAL1Q5VV42 579 aa14.26□□□□□ -0.13
PRPF4-202ENST00000374199 LARGE2Q8N3Y3 721 aa14.26□□□□□ -0.13
PRPF4-202ENST00000374199 HDAC9Q9UKV0 1011 aa14.26□□□□□ -0.13
PRPF4-202ENST00000374199 PHF20L1A8MW92 1017 aa14.26□□□□□ -0.13
PRPF4-202ENST00000374199 USP17L10C9JJH3 530 aa14.26□□□□□ -0.13
PRPF4-202ENST00000374199 FZD9O00144 591 aa14.26□□□□□ -0.13
PRPF4-202ENST00000374199 OPLAHO14841 1288 aa14.26□□□□□ -0.13
PRPF4-202ENST00000374199 KLRC4O43908 158 aa14.26□□□□□ -0.13
PRPF4-202ENST00000374199 KCNJ6P48051 423 aa14.26□□□□□ -0.13
PRPF4-202ENST00000374199 PRELPP51888 382 aa14.26□□□□□ -0.13
PRPF4-202ENST00000374199 TCP10Q12799 353 aa14.26□□□□□ -0.13
PRPF4-202ENST00000374199 TBCKQ8TEA7 893 aa14.26□□□□□ -0.13
PRPF4-202ENST00000374199 GINM1Q9NU53 330 aa14.26□□□□□ -0.13
PRPF4-202ENST00000374199 GRAMD1CQ8IYS0 662 aa14.25□□□□□ -0.13
PRPF4-202ENST00000374199 INTS13Q9NVM9 706 aa14.25□□□□□ -0.13
PRPF4-202ENST00000374199 GOLGB1Q14789 3259 aaKnown RBP14.25□□□□□ -0.13
PRPF4-202ENST00000374199 MEIS2O14770 477 aa14.25□□□□□ -0.13
PRPF4-202ENST00000374199 SMC2O95347 1197 aa14.25□□□□□ -0.13
PRPF4-202ENST00000374199 NDUFB10O96000 172 aa14.25□□□□□ -0.13
PRPF4-202ENST00000374199 DALRD3Q5D0E6 543 aaKnown RBP14.25□□□□□ -0.13
PRPF4-202ENST00000374199 SLFN13Q68D06 897 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms