RNA–Protein interactions for RNA: ENST00000373839.7

PHACTR4-202, Transcript of phosphatase and actin regulator 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHACTR4, Length 6,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-202ENST00000373839 CASC4Q6P4E1 433 aa12.2□□□□□ -0.46
PHACTR4-202ENST00000373839 KRT27Q7Z3Y8 459 aa12.2□□□□□ -0.46
PHACTR4-202ENST00000373839 PPANQ9NQ55 473 aaKnown RBP12.2□□□□□ -0.46
PHACTR4-202ENST00000373839 ARMCX5Q6P1M9 558 aa12.2□□□□□ -0.46
PHACTR4-202ENST00000373839 OR8K1Q8NGG5 319 aa12.2□□□□□ -0.46
PHACTR4-202ENST00000373839 RSAD2Q8WXG1 361 aa12.2□□□□□ -0.46
PHACTR4-202ENST00000373839 AK8Q96MA6 479 aa12.2□□□□□ -0.46
PHACTR4-202ENST00000373839 NLRP1Q9C000 1473 aa12.2□□□□□ -0.46
PHACTR4-202ENST00000373839 GBP1P32455 592 aa12.2□□□□□ -0.46
PHACTR4-202ENST00000373839 DOK7Q18PE1 504 aa12.2□□□□□ -0.46
PHACTR4-202ENST00000373839 CCDC62Q6P9F0 684 aa12.2□□□□□ -0.46
PHACTR4-202ENST00000373839 MAP7D3Q8IWC1 876 aa12.2□□□□□ -0.46
PHACTR4-202ENST00000373839 ATP7BP35670 1465 aa12.2□□□□□ -0.46
PHACTR4-202ENST00000373839 ARHGAP44Q17R89 818 aa12.19□□□□□ -0.46
PHACTR4-202ENST00000373839 FAM26FQ5R3K3 315 aa12.19□□□□□ -0.46
PHACTR4-202ENST00000373839 RRAGAQ7L523 313 aa12.19□□□□□ -0.46
PHACTR4-202ENST00000373839 ARHGEF25Q86VW2 580 aa12.19□□□□□ -0.46
PHACTR4-202ENST00000373839 RTKN2Q8IZC4 609 aa12.19□□□□□ -0.46
PHACTR4-202ENST00000373839 RNF169Q8NCN4 708 aa12.19□□□□□ -0.46
PHACTR4-202ENST00000373839 TRIM11Q96F44 468 aa12.19□□□□□ -0.46
PHACTR4-202ENST00000373839 SERTAD1Q9UHV2 236 aa12.19□□□□□ -0.46
PHACTR4-202ENST00000373839 TTLL1O95922 423 aa12.19□□□□□ -0.46
PHACTR4-202ENST00000373839 SCNN1DP51172 638 aa12.19□□□□□ -0.46
PHACTR4-202ENST00000373839 CYP2J2P51589 502 aa12.19□□□□□ -0.46
PHACTR4-202ENST00000373839 CACNA2D3Q8IZS8 1091 aa12.19□□□□□ -0.46
PHACTR4-202ENST00000373839 AFAP1L1Q8TED9 768 aa12.19□□□□□ -0.46
PHACTR4-202ENST00000373839 SLC7A3Q8WY07 619 aa12.19□□□□□ -0.46
PHACTR4-202ENST00000373839 LSM14BQ9BX40 385 aaKnown RBP12.19□□□□□ -0.46
PHACTR4-202ENST00000373839 PRKAG2Q9UGJ0 569 aa12.19□□□□□ -0.46
PHACTR4-202ENST00000373839 CMA1P23946 247 aa12.19□□□□□ -0.46
PHACTR4-202ENST00000373839 RUNDC3BQ96NL0 473 aa12.19□□□□□ -0.46
PHACTR4-202ENST00000373839 VCXQ9H320 206 aa12.19□□□□□ -0.46
PHACTR4-202ENST00000373839 CBX8Q9HC52 389 aa12.19□□□□□ -0.46
PHACTR4-202ENST00000373839 PANK4Q9NVE7 773 aa12.19□□□□□ -0.46
PHACTR4-202ENST00000373839 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.19□□□□□ -0.465e-7■■■□□ 15.9
PHACTR4-202ENST00000373839 EAF2Q96CJ1 260 aaPredicted RBP12.19□□□□□ -0.46
PHACTR4-202ENST00000373839 RNF26Q9BY78 433 aaPredicted RBP12.19□□□□□ -0.46
PHACTR4-202ENST00000373839 VCX3BQ9H321 246 aa12.19□□□□□ -0.46
PHACTR4-202ENST00000373839 IPO11Q9UI26 975 aaKnown RBP12.19□□□□□ -0.46
PHACTR4-202ENST00000373839 USH1CQ9Y6N9 552 aa12.19□□□□□ -0.46
PHACTR4-202ENST00000373839 RNF8O76064 485 aa12.19□□□□□ -0.46
PHACTR4-202ENST00000373839 ODR4Q5SWX8 454 aa12.19□□□□□ -0.46
PHACTR4-202ENST00000373839 LRRC47Q8N1G4 583 aaKnown RBP12.19□□□□□ -0.46
PHACTR4-202ENST00000373839 NUB1Q9Y5A7 615 aa12.19□□□□□ -0.46
PHACTR4-202ENST00000373839 CCDC160A6NGH7 325 aa12.18□□□□□ -0.46
PHACTR4-202ENST00000373839 PPFIA1Q13136 1202 aa12.18□□□□□ -0.46
PHACTR4-202ENST00000373839 FAM114A2Q9NRY5 505 aa12.18□□□□□ -0.46
PHACTR4-202ENST00000373839 KRT10P13645 584 aa12.18□□□□□ -0.46
PHACTR4-202ENST00000373839 IREB2P48200 963 aaKnown RBP12.18□□□□□ -0.46
PHACTR4-202ENST00000373839 RAD51AP2Q09MP3 1159 aa12.18□□□□□ -0.46
PHACTR4-202ENST00000373839 SUGCTQ9HAC7 445 aa12.18□□□□□ -0.46
PHACTR4-202ENST00000373839 BZW2Q9Y6E2 419 aaKnown RBP12.18□□□□□ -0.46
PHACTR4-202ENST00000373839 ABCA5Q8WWZ7 1642 aa12.18□□□□□ -0.46
PHACTR4-202ENST00000373839 EIF3CLB5ME19 914 aaKnown RBP12.18□□□□□ -0.46
PHACTR4-202ENST00000373839 KRT15P19012 456 aa12.18□□□□□ -0.46
PHACTR4-202ENST00000373839 FAM160B2Q86V87 743 aa12.18□□□□□ -0.46
PHACTR4-202ENST00000373839 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.18□□□□□ -0.46
PHACTR4-202ENST00000373839 DDX17Q92841 729 aaKnown RBP12.18□□□□□ -0.46
PHACTR4-202ENST00000373839 EIF3CQ99613 913 aaKnown RBP12.18□□□□□ -0.46
PHACTR4-202ENST00000373839 MYO1AQ9UBC5 1043 aa12.18□□□□□ -0.46
PHACTR4-202ENST00000373839 ZNF233A6NK53 670 aa12.18□□□□□ -0.46
PHACTR4-202ENST00000373839 METTL23Q86XA0 190 aa12.18□□□□□ -0.46
PHACTR4-202ENST00000373839 U2AF1L4Q8WU68 220 aaKnown RBP12.18□□□□□ -0.46
PHACTR4-202ENST00000373839 MMS19Q96T76 1030 aa12.18□□□□□ -0.46
PHACTR4-202ENST00000373839 RBSNQ9H1K0 784 aa12.18□□□□□ -0.46
PHACTR4-202ENST00000373839 RPAP1Q9BWH6 1393 aaPredicted RBP12.18□□□□□ -0.46
PHACTR4-202ENST00000373839 ZNF445P59923 1031 aa12.18□□□□□ -0.46
PHACTR4-202ENST00000373839 POLA2Q14181 598 aa12.18□□□□□ -0.46
PHACTR4-202ENST00000373839 RPUSD2Q8IZ73 545 aaKnown RBP12.18□□□□□ -0.46
PHACTR4-202ENST00000373839 CCDC68Q9H2F9 335 aa12.18□□□□□ -0.46
PHACTR4-202ENST00000373839 FAM207AQ9NSI2 230 aaPredicted RBP12.18□□□□□ -0.46
PHACTR4-202ENST00000373839 TYW1Q9NV66 732 aaKnown RBP12.18□□□□□ -0.46
PHACTR4-202ENST00000373839 PNMA3Q9UL41 463 aa12.18□□□□□ -0.46
PHACTR4-202ENST00000373839 LRRIQ4A6NIV6 560 aa12.17□□□□□ -0.46
PHACTR4-202ENST00000373839 KCNJ18B7U540 433 aa12.17□□□□□ -0.46
PHACTR4-202ENST00000373839 TECP42680 631 aa12.17□□□□□ -0.46
PHACTR4-202ENST00000373839 ATP11AP98196 1134 aa12.17□□□□□ -0.46
PHACTR4-202ENST00000373839 KCNJ12Q14500 433 aa12.17□□□□□ -0.46
PHACTR4-202ENST00000373839 MIS18BP1Q6P0N0 1132 aa12.17□□□□□ -0.46
PHACTR4-202ENST00000373839 PRDM10Q9NQV6 1147 aa12.17□□□□□ -0.46
PHACTR4-202ENST00000373839 FRMPD2Q68DX3 1309 aaPredicted RBP12.17□□□□□ -0.46
PHACTR4-202ENST00000373839 PPFIA4O75335 1185 aa12.17□□□□□ -0.46
PHACTR4-202ENST00000373839 MYL1P05976 194 aa12.17□□□□□ -0.46
PHACTR4-202ENST00000373839 ZSWIM6Q9HCJ5 1215 aa12.17□□□□□ -0.46
PHACTR4-202ENST00000373839 KIAA1468Q9P260 1216 aa12.17□□□□□ -0.46
PHACTR4-202ENST00000373839 ARHGEF5Q12774 1597 aa12.17□□□□□ -0.46
PHACTR4-202ENST00000373839 PFKFB1P16118 471 aa12.17□□□□□ -0.46
PHACTR4-202ENST00000373839 LONRF2Q1L5Z9 754 aa12.17□□□□□ -0.46
PHACTR4-202ENST00000373839 ATP8B3O60423 1300 aa12.17□□□□□ -0.46
PHACTR4-202ENST00000373839 IGSF1Q8N6C5 1336 aa12.17□□□□□ -0.46
PHACTR4-202ENST00000373839 MAN1A1P33908 653 aa12.17□□□□□ -0.46
PHACTR4-202ENST00000373839 CACTINQ8WUQ7 758 aaKnown RBP12.17□□□□□ -0.46
PHACTR4-202ENST00000373839 SDR42E1Q8WUS8 393 aa12.17□□□□□ -0.46
PHACTR4-202ENST00000373839 TTLL3Q9Y4R7 772 aa12.17□□□□□ -0.46
PHACTR4-202ENST00000373839 CLASP1Q7Z460 1538 aa12.17□□□□□ -0.46
PHACTR4-202ENST00000373839 JAK2O60674 1132 aa12.17□□□□□ -0.46
PHACTR4-202ENST00000373839 BRD1O95696 1058 aa12.17□□□□□ -0.46
PHACTR4-202ENST00000373839 FGAP02671 866 aa12.17□□□□□ -0.46
PHACTR4-202ENST00000373839 NPR1P16066 1061 aa12.17□□□□□ -0.46
PHACTR4-202ENST00000373839 PTK2Q05397 1052 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms