RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 UBR3Q6ZT12 1888 aa26.88■■□□□ 1.89
CDK9-201ENST00000373264 AFF2P51816 1311 aa26.88■■□□□ 1.89
CDK9-201ENST00000373264 MYH1P12882 1939 aa26.88■■□□□ 1.89
CDK9-201ENST00000373264 KCNJ18B7U540 433 aa26.88■■□□□ 1.89
CDK9-201ENST00000373264 UBA7P41226 1012 aa26.88■■□□□ 1.89
CDK9-201ENST00000373264 KCNJ12Q14500 433 aa26.88■■□□□ 1.89
CDK9-201ENST00000373264 ARHGAP29Q52LW3 1261 aa26.88■■□□□ 1.89
CDK9-201ENST00000373264 JAKMIP3Q5VZ66 844 aa26.88■■□□□ 1.89
CDK9-201ENST00000373264 LRRC47Q8N1G4 583 aaKnown RBP26.88■■□□□ 1.89
CDK9-201ENST00000373264 PANX2Q96RD6 677 aa26.88■■□□□ 1.89
CDK9-201ENST00000373264 ZMYND12Q9H0C1 365 aa26.88■■□□□ 1.89
CDK9-201ENST00000373264 ZBTB22O15209 634 aa26.87■■□□□ 1.89
CDK9-201ENST00000373264 KLRC4O43908 158 aa26.87■■□□□ 1.89
CDK9-201ENST00000373264 COPB1P53618 953 aaKnown RBP26.87■■□□□ 1.89
CDK9-201ENST00000373264 TXNRD1Q16881 649 aa26.87■■□□□ 1.89
CDK9-201ENST00000373264 TCP11X2Q5H9J9 407 aa26.87■■□□□ 1.89
CDK9-201ENST00000373264 KIFC2Q96AC6 838 aa26.87■■□□□ 1.89
CDK9-201ENST00000373264 ZSCAN20P17040 1043 aaPredicted RBP26.87■■□□□ 1.89
CDK9-201ENST00000373264 SPZ1Q9BXG8 430 aa26.86■■□□□ 1.89
CDK9-201ENST00000373264 DDX4Q9NQI0 724 aaKnown RBP26.86■■□□□ 1.89
CDK9-201ENST00000373264 LIMA1Q9UHB6 759 aaKnown RBP26.86■■□□□ 1.89
CDK9-201ENST00000373264 ADGRG1Q9Y653 693 aa26.86■■□□□ 1.89
CDK9-201ENST00000373264 PLCG1P19174 1290 aa26.85■■□□□ 1.89
CDK9-201ENST00000373264 CASQ1P31415 396 aa26.85■■□□□ 1.89
CDK9-201ENST00000373264 FILIP1LQ4L180 1135 aa26.85■■□□□ 1.89
CDK9-201ENST00000373264 CTAGE1Q96RT6 745 aa26.85■■□□□ 1.89
CDK9-201ENST00000373264 CCDC178Q5BJE1 867 aa26.85■■□□□ 1.89
CDK9-201ENST00000373264 ACRBPQ8NEB7 543 aa26.85■■□□□ 1.89
CDK9-201ENST00000373264 COA7Q96BR5 231 aa26.85■■□□□ 1.89
CDK9-201ENST00000373264 TECP42680 631 aa26.84■■□□□ 1.89
CDK9-201ENST00000373264 ADSSL1Q8N142 457 aa26.84■■□□□ 1.89
CDK9-201ENST00000373264 CERS5Q8N5B7 392 aa26.84■■□□□ 1.89
CDK9-201ENST00000373264 HPS3Q969F9 1004 aa26.84■■□□□ 1.89
CDK9-201ENST00000373264 POLRMTO00411 1230 aaKnown RBP26.84■■□□□ 1.89
CDK9-201ENST00000373264 ERVK-24P63145 666 aa26.84■■□□□ 1.89
CDK9-201ENST00000373264 FEZ1Q99689 392 aa26.84■■□□□ 1.89
CDK9-201ENST00000373264 OGFRQ9NZT2 677 aa26.84■■□□□ 1.89
CDK9-201ENST00000373264 AKR1B1P15121 316 aa26.83■■□□□ 1.89
CDK9-201ENST00000373264 SMAP1Q8IYB5 467 aaPredicted RBP26.83■■□□□ 1.89
CDK9-201ENST00000373264 TBCKQ8TEA7 893 aa26.83■■□□□ 1.89
CDK9-201ENST00000373264 RRP36Q96EU6 259 aaKnown RBP26.83■■□□□ 1.89
CDK9-201ENST00000373264 GAKO14976 1311 aa26.83■■□□□ 1.89
CDK9-201ENST00000373264 LRRC10BA6NIK2 292 aa26.83■■□□□ 1.89
CDK9-201ENST00000373264 NKRFO15226 690 aaKnown RBP eCLIP26.83■■□□□ 1.89
CDK9-201ENST00000373264 TADA3O75528 432 aa26.83■■□□□ 1.89
CDK9-201ENST00000373264 TUBB4AP04350 444 aa26.83■■□□□ 1.89
CDK9-201ENST00000373264 ADRA2BP18089 450 aa26.83■■□□□ 1.89
CDK9-201ENST00000373264 SCNN1DP51172 638 aa26.83■■□□□ 1.89
CDK9-201ENST00000373264 POTEDQ86YR6 584 aa26.83■■□□□ 1.89
CDK9-201ENST00000373264 MNS1Q8NEH6 495 aa26.83■■□□□ 1.89
CDK9-201ENST00000373264 KBTBD4Q9NVX7 518 aa26.83■■□□□ 1.89
CDK9-201ENST00000373264 TRIM37O94972 964 aa26.82■■□□□ 1.88
CDK9-201ENST00000373264 TFRCP02786 760 aaKnown RBP26.82■■□□□ 1.88
CDK9-201ENST00000373264 CCDC175P0C221 793 aa26.82■■□□□ 1.88
CDK9-201ENST00000373264 H2AFXP16104 143 aaPredicted RBP26.82■■□□□ 1.88
CDK9-201ENST00000373264 NONOQ15233 471 aaKnown RBP eCLIP26.82■■□□□ 1.88
CDK9-201ENST00000373264 RMND1Q9NWS8 449 aa26.82■■□□□ 1.88
CDK9-201ENST00000373264 BBOX1O75936 387 aa26.82■■□□□ 1.88
CDK9-201ENST00000373264 PDHBP11177 359 aa26.82■■□□□ 1.88
CDK9-201ENST00000373264 CLCN6P51797 869 aa26.82■■□□□ 1.88
CDK9-201ENST00000373264 DOK7Q18PE1 504 aa26.82■■□□□ 1.88
CDK9-201ENST00000373264 CABP7Q86V35 215 aa26.82■■□□□ 1.88
CDK9-201ENST00000373264 PYM1Q9BRP8 204 aaKnown RBP26.82■■□□□ 1.88
CDK9-201ENST00000373264 ZNF287Q9HBT7 754 aa26.82■■□□□ 1.88
CDK9-201ENST00000373264 GPCPD1Q9NPB8 672 aa26.82■■□□□ 1.88
CDK9-201ENST00000373264 OR52Z1P0C646 297 aa26.81■■□□□ 1.88
CDK9-201ENST00000373264 UBXN1Q04323 297 aa26.81■■□□□ 1.88
CDK9-201ENST00000373264 DPP8Q6V1X1 898 aaPredicted RBP26.81■■□□□ 1.88
CDK9-201ENST00000373264 CCSER1Q9C0I3 900 aa26.81■■□□□ 1.88
CDK9-201ENST00000373264 PODXL2Q9NZ53 605 aa26.81■■□□□ 1.88
CDK9-201ENST00000373264 PES1O00541 588 aaKnown RBP26.81■■□□□ 1.88
CDK9-201ENST00000373264 GALNT17Q6IS24 598 aa26.81■■□□□ 1.88
CDK9-201ENST00000373264 CCDC12Q8WUD4 166 aaPredicted RBP26.81■■□□□ 1.88
CDK9-201ENST00000373264 FAM163AQ96GL9 167 aaPredicted RBP26.81■■□□□ 1.88
CDK9-201ENST00000373264 NUP88Q99567 741 aaPredicted RBP26.81■■□□□ 1.88
CDK9-201ENST00000373264 ST7Q9NRC1 585 aa26.81■■□□□ 1.88
CDK9-201ENST00000373264 SEC63Q9UGP8 760 aaKnown RBP26.81■■□□□ 1.88
CDK9-201ENST00000373264 MAP3K9P80192 1104 aa26.8■■□□□ 1.88
CDK9-201ENST00000373264 UBXN4Q92575 508 aa26.8■■□□□ 1.88
CDK9-201ENST00000373264 LZTS2Q9BRK4 669 aa26.8■■□□□ 1.88
CDK9-201ENST00000373264 MMTAG2Q9BU76 263 aaKnown RBP26.8■■□□□ 1.88
CDK9-201ENST00000373264 SRRTQ9BXP5 876 aaKnown RBP26.8■■□□□ 1.88
CDK9-201ENST00000373264 ABHD10Q9NUJ1 306 aa26.8■■□□□ 1.88
CDK9-201ENST00000373264 EDIL3O43854 480 aa26.8■■□□□ 1.88
CDK9-201ENST00000373264 FCER1AP12319 257 aa26.8■■□□□ 1.88
CDK9-201ENST00000373264 SPATA31A6Q5VVP1 1343 aa26.8■■□□□ 1.88
CDK9-201ENST00000373264 ZSWIM4Q9H7M6 989 aa26.8■■□□□ 1.88
CDK9-201ENST00000373264 C6orf50Q9HD87 102 aa26.8■■□□□ 1.88
CDK9-201ENST00000373264 PLCG2P16885 1265 aa26.79■■□□□ 1.88
CDK9-201ENST00000373264 HOXA10P31260 410 aaPredicted RBP26.79■■□□□ 1.88
CDK9-201ENST00000373264 NEK8Q86SG6 692 aa26.79■■□□□ 1.88
CDK9-201ENST00000373264 UIMC1Q96RL1 719 aa26.79■■□□□ 1.88
CDK9-201ENST00000373264 MRFAP1Q9Y605 127 aa26.79■■□□□ 1.88
CDK9-201ENST00000373264 PPEF1O14829 653 aaPredicted RBP26.79■■□□□ 1.88
CDK9-201ENST00000373264 TXKP42681 527 aa26.79■■□□□ 1.88
CDK9-201ENST00000373264 KRT25Q7Z3Z0 450 aa26.79■■□□□ 1.88
CDK9-201ENST00000373264 GJA10Q969M2 543 aa26.79■■□□□ 1.88
CDK9-201ENST00000373264 CHP1Q99653 195 aa26.79■■□□□ 1.88
CDK9-201ENST00000373264 MTMR4Q9NYA4 1195 aa26.79■■□□□ 1.88
CDK9-201ENST00000373264 ADAMTSL1Q8N6G6 1762 aa26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms