RNA–Protein interactions for RNA: ENST00000373193.7

PTPRT-205, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRT, Length 12,681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-205ENST00000373193 NBNO60934 754 aa10.09□□□□□ -0.79
PTPRT-205ENST00000373193 OTUD7AQ8TE49 926 aaPredicted RBP10.09□□□□□ -0.79
PTPRT-205ENST00000373193 NR1H4Q96RI1 486 aaPredicted RBP10.09□□□□□ -0.79
PTPRT-205ENST00000373193 TRIM55Q9BYV6 548 aa10.09□□□□□ -0.79
PTPRT-205ENST00000373193 CCDC68Q9H2F9 335 aa10.09□□□□□ -0.79
PTPRT-205ENST00000373193 MAP7D3Q8IWC1 876 aa10.09□□□□□ -0.79
PTPRT-205ENST00000373193 EFHD1Q9BUP0 239 aa10.09□□□□□ -0.79
PTPRT-205ENST00000373193 FAM135AQ9P2D6 1515 aa10.09□□□□□ -0.79
PTPRT-205ENST00000373193 GNAT2P19087 354 aa10.09□□□□□ -0.79
PTPRT-205ENST00000373193 NBPF20Q3BBV1 942 aa10.09□□□□□ -0.79
PTPRT-205ENST00000373193 ICE2Q659A1 982 aa10.09□□□□□ -0.79
PTPRT-205ENST00000373193 CNPY4Q8N129 248 aa10.09□□□□□ -0.79
PTPRT-205ENST00000373193 HFM1A2PYH4 1435 aa10.09□□□□□ -0.79
PTPRT-205ENST00000373193 CCDC141Q6ZP82 1450 aa10.09□□□□□ -0.79
PTPRT-205ENST00000373193 PLS3P13797 630 aa10.09□□□□□ -0.79
PTPRT-205ENST00000373193 ZNF653Q96CK0 615 aa10.09□□□□□ -0.79
PTPRT-205ENST00000373193 MAIP1Q8WWC4 291 aa10.08□□□□□ -0.8
PTPRT-205ENST00000373193 ATP6V1E2Q96A05 226 aa10.08□□□□□ -0.8
PTPRT-205ENST00000373193 USP28Q96RU2 1077 aa10.08□□□□□ -0.8
PTPRT-205ENST00000373193 NNTQ13423 1086 aa10.08□□□□□ -0.8
PTPRT-205ENST00000373193 NBPF14Q5TI25 921 aa10.08□□□□□ -0.8
PTPRT-205ENST00000373193 EP400NLQ6ZTU2 488 aa10.08□□□□□ -0.8
PTPRT-205ENST00000373193 PARD3BQ8TEW8 1205 aa10.08□□□□□ -0.8
PTPRT-205ENST00000373193 TRPV6Q9H1D0 765 aa10.08□□□□□ -0.8
PTPRT-205ENST00000373193 EPB41L5Q9HCM4 733 aa10.08□□□□□ -0.8
PTPRT-205ENST00000373193 E9PMD0 336 aa10.08□□□□□ -0.8
PTPRT-205ENST00000373193 NOP56O00567 594 aaKnown RBP10.08□□□□□ -0.8
PTPRT-205ENST00000373193 RFC4P35249 363 aa10.08□□□□□ -0.8
PTPRT-205ENST00000373193 ATL3Q6DD88 541 aa10.08□□□□□ -0.8
PTPRT-205ENST00000373193 DZIP3Q86Y13 1208 aaKnown RBP10.08□□□□□ -0.8
PTPRT-205ENST00000373193 LRRC8AQ8IWT6 810 aa10.08□□□□□ -0.8
PTPRT-205ENST00000373193 ENOX1Q8TC92 643 aaKnown RBP10.08□□□□□ -0.8
PTPRT-205ENST00000373193 NRBP1Q9UHY1 535 aa10.08□□□□□ -0.8
PTPRT-205ENST00000373193 MSH6P52701 1360 aa10.08□□□□□ -0.8
PTPRT-205ENST00000373193 HAUS3Q68CZ6 603 aa10.08□□□□□ -0.8
PTPRT-205ENST00000373193 KCNH5Q8NCM2 988 aa10.08□□□□□ -0.8
PTPRT-205ENST00000373193 EXT2Q93063 718 aa10.08□□□□□ -0.8
PTPRT-205ENST00000373193 EEF2KMTQ96G04 330 aa10.08□□□□□ -0.8
PTPRT-205ENST00000373193 SERTAD1Q9UHV2 236 aa10.08□□□□□ -0.8
PTPRT-205ENST00000373193 ZNF148Q9UQR1 794 aa10.08□□□□□ -0.8
PTPRT-205ENST00000373193 B4DLN1 442 aa10.08□□□□□ -0.8
PTPRT-205ENST00000373193 SPAG7O75391 227 aa10.08□□□□□ -0.8
PTPRT-205ENST00000373193 MRPL12P52815 198 aaKnown RBP10.08□□□□□ -0.8
PTPRT-205ENST00000373193 MRPL28Q13084 256 aaKnown RBP10.08□□□□□ -0.8
PTPRT-205ENST00000373193 DBNLQ9UJU6 430 aaKnown RBP10.08□□□□□ -0.8
PTPRT-205ENST00000373193 SLC39A6Q13433 755 aa10.08□□□□□ -0.8
PTPRT-205ENST00000373193 IQCB1Q15051 598 aa10.08□□□□□ -0.8
PTPRT-205ENST00000373193 ZNF827Q17R98 1081 aa10.08□□□□□ -0.8
PTPRT-205ENST00000373193 CLEC11AQ9Y240 323 aa10.08□□□□□ -0.8
PTPRT-205ENST00000373193 KDM2BQ8NHM5 1336 aa10.08□□□□□ -0.8
PTPRT-205ENST00000373193 TRAF1Q13077 416 aa10.08□□□□□ -0.8
PTPRT-205ENST00000373193 NCLNQ969V3 563 aa10.08□□□□□ -0.8
PTPRT-205ENST00000373193 TSC22D4Q9Y3Q8 395 aa10.08□□□□□ -0.8
PTPRT-205ENST00000373193 SLC7A5Q01650 507 aa10.08□□□□□ -0.8
PTPRT-205ENST00000373193 CTDSPL2Q05D32 466 aa10.08□□□□□ -0.8
PTPRT-205ENST00000373193 TPH2Q8IWU9 490 aa10.08□□□□□ -0.8
PTPRT-205ENST00000373193 ENAHQ8N8S7 591 aaPredicted RBP10.08□□□□□ -0.8
PTPRT-205ENST00000373193 FBXL13Q8NEE6 735 aa10.08□□□□□ -0.8
PTPRT-205ENST00000373193 ING2Q9H160 280 aa10.08□□□□□ -0.8
PTPRT-205ENST00000373193 KDRP35968 1356 aa10.08□□□□□ -0.8
PTPRT-205ENST00000373193 RGS9BPQ6ZS82 235 aa10.08□□□□□ -0.8
PTPRT-205ENST00000373193 MRPL50Q8N5N7 158 aaKnown RBP10.08□□□□□ -0.8
PTPRT-205ENST00000373193 AK9Q5TCS8 1911 aa10.08□□□□□ -0.8
PTPRT-205ENST00000373193 SYNDIG1LA6NDD5 238 aa10.07□□□□□ -0.8
PTPRT-205ENST00000373193 TYW1Q9NV66 732 aaKnown RBP10.07□□□□□ -0.8
PTPRT-205ENST00000373193 CARSP49589 748 aaKnown RBP10.07□□□□□ -0.8
PTPRT-205ENST00000373193 CCDC195A0A1B0GUA6 201 aa10.07□□□□□ -0.8
PTPRT-205ENST00000373193 PRDM1O75626 825 aa10.07□□□□□ -0.8
PTPRT-205ENST00000373193 SLFN14P0C7P3 912 aa10.07□□□□□ -0.8
PTPRT-205ENST00000373193 RAB44Q7Z6P3 723 aaPredicted RBP10.07□□□□□ -0.8
PTPRT-205ENST00000373193 RNF169Q8NCN4 708 aa10.07□□□□□ -0.8
PTPRT-205ENST00000373193 OSBPL1AQ9BXW6 950 aa10.07□□□□□ -0.8
PTPRT-205ENST00000373193 DNAJC17Q9NVM6 304 aaKnown RBP10.07□□□□□ -0.8
PTPRT-205ENST00000373193 DAAM1Q9Y4D1 1078 aa10.07□□□□□ -0.8
PTPRT-205ENST00000373193 BRD2P25440 801 aaKnown RBP10.07□□□□□ -0.8
PTPRT-205ENST00000373193 YARSP54577 528 aaKnown RBP10.07□□□□□ -0.8
PTPRT-205ENST00000373193 OR8K1Q8NGG5 319 aa10.07□□□□□ -0.8
PTPRT-205ENST00000373193 RFX8Q6ZV50 586 aa10.07□□□□□ -0.8
PTPRT-205ENST00000373193 RFX6Q8HWS3 928 aa10.07□□□□□ -0.8
PTPRT-205ENST00000373193 PAWRQ96IZ0 340 aaKnown RBP10.07□□□□□ -0.8
PTPRT-205ENST00000373193 DYNLT1P63172 113 aa10.07□□□□□ -0.8
PTPRT-205ENST00000373193 DHX9Q08211 1270 aaKnown RBP10.07□□□□□ -0.8
PTPRT-205ENST00000373193 NOP53Q9NZM5 478 aaKnown RBP10.07□□□□□ -0.8
PTPRT-205ENST00000373193 DNM3Q9UQ16 869 aa10.07□□□□□ -0.8
PTPRT-205ENST00000373193 CEP85Q6P2H3 762 aa10.07□□□□□ -0.8
PTPRT-205ENST00000373193 HAUS2Q9NVX0 235 aa10.07□□□□□ -0.8
PTPRT-205ENST00000373193 SPOPLQ6IQ16 392 aa10.07□□□□□ -0.8
PTPRT-205ENST00000373193 COPS6Q7L5N1 327 aa10.07□□□□□ -0.8
PTPRT-205ENST00000373193 ARMT1Q9H993 441 aa10.07□□□□□ -0.8
PTPRT-205ENST00000373193 TRPC1P48995 793 aa10.07□□□□□ -0.8
PTPRT-205ENST00000373193 CATSPER3Q86XQ3 398 aa10.07□□□□□ -0.8
PTPRT-205ENST00000373193 PGBD1Q96JS3 809 aa10.07□□□□□ -0.8
PTPRT-205ENST00000373193 CCDC90BQ9GZT6 254 aa10.07□□□□□ -0.8
PTPRT-205ENST00000373193 NDUFB9Q9Y6M9 179 aa10.07□□□□□ -0.8
PTPRT-205ENST00000373193 DEXIO95424 95 aa10.06□□□□□ -0.8
PTPRT-205ENST00000373193 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.06□□□□□ -0.8
PTPRT-205ENST00000373193 BIN2Q9UBW5 565 aaPredicted RBP10.06□□□□□ -0.8
PTPRT-205ENST00000373193 CPP00450 1065 aa10.06□□□□□ -0.8
PTPRT-205ENST00000373193 CABP7Q86V35 215 aa10.06□□□□□ -0.8
PTPRT-205ENST00000373193 C8orf58Q8NAV2 365 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms