RNA–Protein interactions for RNA: ENST00000373159.1

TRAPPC3-201, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-201ENST00000373159 TDO2P48775 406 aa15.6■□□□□ 0.09
TRAPPC3-201ENST00000373159 NKX3-2P78367 333 aa15.6■□□□□ 0.09
TRAPPC3-201ENST00000373159 CCDC144BQ3MJ40 725 aa15.6■□□□□ 0.09
TRAPPC3-201ENST00000373159 MFSD5Q6N075 450 aa15.6■□□□□ 0.09
TRAPPC3-201ENST00000373159 IFNL3Q8IZI9 196 aa15.6■□□□□ 0.09
TRAPPC3-201ENST00000373159 NEDD1Q8NHV4 660 aa15.6■□□□□ 0.09
TRAPPC3-201ENST00000373159 GPATCH3Q96I76 525 aa15.6■□□□□ 0.09
TRAPPC3-201ENST00000373159 ARVCFO00192 962 aa15.59■□□□□ 0.09
TRAPPC3-201ENST00000373159 ADCY6O43306 1168 aa15.59■□□□□ 0.09
TRAPPC3-201ENST00000373159 APPP05067 770 aa15.59■□□□□ 0.09
TRAPPC3-201ENST00000373159 BMP3P12645 472 aa15.59■□□□□ 0.09
TRAPPC3-201ENST00000373159 IRX5P78411 483 aaPredicted RBP15.59■□□□□ 0.09
TRAPPC3-201ENST00000373159 GRIN2CQ14957 1233 aa15.59■□□□□ 0.09
TRAPPC3-201ENST00000373159 LRRFIP1Q32MZ4 808 aaKnown RBP15.59■□□□□ 0.09
TRAPPC3-201ENST00000373159 GNASQ5JWF2 1037 aa15.59■□□□□ 0.09
TRAPPC3-201ENST00000373159 C20orf194Q5TEA3 1177 aa15.59■□□□□ 0.09
TRAPPC3-201ENST00000373159 SLFN13Q68D06 897 aa15.59■□□□□ 0.09
TRAPPC3-201ENST00000373159 CCDC174Q6PII3 467 aa15.59■□□□□ 0.09
TRAPPC3-201ENST00000373159 C16orf59Q7L2K0 433 aa15.59■□□□□ 0.09
TRAPPC3-201ENST00000373159 ARMCX2Q7L311 632 aa15.59■□□□□ 0.09
TRAPPC3-201ENST00000373159 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.59■□□□□ 0.091e-7■■■■■ 27.7
TRAPPC3-201ENST00000373159 KATNBL1Q9H079 304 aa15.59■□□□□ 0.09
TRAPPC3-201ENST00000373159 EYSQ5T1H1 3165 aa15.59■□□□□ 0.09
TRAPPC3-201ENST00000373159 GREB1LQ9C091 1923 aaPredicted RBP15.58■□□□□ 0.09
TRAPPC3-201ENST00000373159 SPTBN5Q9NRC6 3674 aaKnown RBP15.58■□□□□ 0.09
TRAPPC3-201ENST00000373159 A0A0U1RQG5 324 aaPredicted RBP15.58■□□□□ 0.08
TRAPPC3-201ENST00000373159 M0R2C6 588 aa15.58■□□□□ 0.08
TRAPPC3-201ENST00000373159 DNAJB2P25686 324 aa15.58■□□□□ 0.08
TRAPPC3-201ENST00000373159 PPIGQ13427 754 aaKnown RBP eCLIP15.58■□□□□ 0.082e-6■■□□□ 13.5
TRAPPC3-201ENST00000373159 RASIP1Q5U651 963 aa15.58■□□□□ 0.08
TRAPPC3-201ENST00000373159 CCDC144CPQ8IYA2 1237 aa15.58■□□□□ 0.08
TRAPPC3-201ENST00000373159 FAM133AQ8N9E0 248 aa15.58■□□□□ 0.08
TRAPPC3-201ENST00000373159 VTI1AQ96AJ9 217 aa15.58■□□□□ 0.08
TRAPPC3-201ENST00000373159 NACAP1Q9BZK3 213 aa15.58■□□□□ 0.08
TRAPPC3-201ENST00000373159 PLXNA1Q9UIW2 1896 aa15.58■□□□□ 0.08
TRAPPC3-201ENST00000373159 TMEM232C9JQI7 657 aa15.57■□□□□ 0.08
TRAPPC3-201ENST00000373159 CTAGE5O15320 804 aa15.57■□□□□ 0.08
TRAPPC3-201ENST00000373159 TSPY3P0CV98 308 aa15.57■□□□□ 0.08
TRAPPC3-201ENST00000373159 TSPY8P0CW00 308 aa15.57■□□□□ 0.08
TRAPPC3-201ENST00000373159 PDE4BQ07343 736 aa15.57■□□□□ 0.08
TRAPPC3-201ENST00000373159 TMEM240Q5SV17 173 aa15.57■□□□□ 0.08
TRAPPC3-201ENST00000373159 TSHZ3Q63HK5 1081 aa15.57■□□□□ 0.08
TRAPPC3-201ENST00000373159 LRRC47Q8N1G4 583 aaKnown RBP15.57■□□□□ 0.08
TRAPPC3-201ENST00000373159 TMEM199Q8N511 208 aa15.57■□□□□ 0.08
TRAPPC3-201ENST00000373159 CHURC1Q8WUH1 139 aa15.57■□□□□ 0.08
TRAPPC3-201ENST00000373159 STAG1Q8WVM7 1258 aa15.57■□□□□ 0.08
TRAPPC3-201ENST00000373159 TIFAQ96CG3 184 aa15.57■□□□□ 0.08
TRAPPC3-201ENST00000373159 ZNF576Q9H609 170 aa15.57■□□□□ 0.08
TRAPPC3-201ENST00000373159 ACAD9Q9H845 621 aa15.57■□□□□ 0.08
TRAPPC3-201ENST00000373159 PLA2G6O60733 806 aa15.56■□□□□ 0.08
TRAPPC3-201ENST00000373159 SLC3A2P08195 630 aaKnown RBP15.56■□□□□ 0.08
TRAPPC3-201ENST00000373159 STAT2P52630 851 aa15.56■□□□□ 0.08
TRAPPC3-201ENST00000373159 TFAP4Q01664 338 aa15.56■□□□□ 0.08
TRAPPC3-201ENST00000373159 CNTN2Q02246 1040 aa15.56■□□□□ 0.08
TRAPPC3-201ENST00000373159 TKFCQ3LXA3 575 aa15.56■□□□□ 0.08
TRAPPC3-201ENST00000373159 FAM160B2Q86V87 743 aa15.56■□□□□ 0.08
TRAPPC3-201ENST00000373159 FAM126BQ8IXS8 530 aa15.56■□□□□ 0.08
TRAPPC3-201ENST00000373159 SYMPKQ92797 1274 aaKnown RBP15.56■□□□□ 0.08
TRAPPC3-201ENST00000373159 GMCL1Q96IK5 515 aa15.56■□□□□ 0.08
TRAPPC3-201ENST00000373159 PLIN4Q96Q06 1357 aa15.56■□□□□ 0.08
TRAPPC3-201ENST00000373159 MYH7P12883 1935 aa15.56■□□□□ 0.08
TRAPPC3-201ENST00000373159 ZNF536O15090 1300 aa15.55■□□□□ 0.08
TRAPPC3-201ENST00000373159 ASB14A6NK59 587 aa15.55■□□□□ 0.08
TRAPPC3-201ENST00000373159 TLR3O15455 904 aaKnown RBP15.55■□□□□ 0.08
TRAPPC3-201ENST00000373159 CD4P01730 458 aa15.55■□□□□ 0.08
TRAPPC3-201ENST00000373159 CSF2RAP15509 400 aa15.55■□□□□ 0.08
TRAPPC3-201ENST00000373159 TNFAIP2Q03169 654 aa15.55■□□□□ 0.08
TRAPPC3-201ENST00000373159 PPP4R3BQ5MIZ7 849 aa15.55■□□□□ 0.08
TRAPPC3-201ENST00000373159 SLC43A3Q8NBI5 491 aa15.55■□□□□ 0.08
TRAPPC3-201ENST00000373159 AGBL1Q96MI9 1066 aa15.55■□□□□ 0.08
TRAPPC3-201ENST00000373159 A1CFQ9NQ94 594 aaKnown RBP15.55■□□□□ 0.08
TRAPPC3-201ENST00000373159 HOMER2Q9NSB8 354 aa15.55■□□□□ 0.08
TRAPPC3-201ENST00000373159 GNEQ9Y223 722 aaKnown RBP15.55■□□□□ 0.08
TRAPPC3-201ENST00000373159 TTC41PQ6P2S7 1318 aa15.54■□□□□ 0.08
TRAPPC3-201ENST00000373159 MYO9BQ13459 2157 aa15.54■□□□□ 0.08
TRAPPC3-201ENST00000373159 SOWAHBA6NEL2 793 aa15.54■□□□□ 0.08
TRAPPC3-201ENST00000373159 CABYRO75952 493 aa15.54■□□□□ 0.08
TRAPPC3-201ENST00000373159 MCCP23508 829 aa15.54■□□□□ 0.08
TRAPPC3-201ENST00000373159 SLC1A4P43007 532 aa15.54■□□□□ 0.08
TRAPPC3-201ENST00000373159 PPARAQ07869 468 aa15.54■□□□□ 0.08
TRAPPC3-201ENST00000373159 PSRC1Q6PGN9 363 aaPredicted RBP15.54■□□□□ 0.08
TRAPPC3-201ENST00000373159 CCDC129Q6ZRS4 1044 aa15.54■□□□□ 0.08
TRAPPC3-201ENST00000373159 ZNF365Q70YC5 407 aa15.54■□□□□ 0.08
TRAPPC3-201ENST00000373159 SEC62Q99442 399 aaKnown RBP15.54■□□□□ 0.08
TRAPPC3-201ENST00000373159 SEZ6LQ9BYH1 1024 aa15.54■□□□□ 0.08
TRAPPC3-201ENST00000373159 PBX4Q9BYU1 374 aa15.54■□□□□ 0.08
TRAPPC3-201ENST00000373159 NAPBQ9H115 298 aa15.54■□□□□ 0.08
TRAPPC3-201ENST00000373159 RNF146Q9NTX7 359 aa15.54■□□□□ 0.08
TRAPPC3-201ENST00000373159 ASTN1O14525 1302 aa15.53■□□□□ 0.08
TRAPPC3-201ENST00000373159 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.53■□□□□ 0.08
TRAPPC3-201ENST00000373159 ERC2O15083 957 aa15.53■□□□□ 0.08
TRAPPC3-201ENST00000373159 BEX3Q00994 111 aa15.53■□□□□ 0.08
TRAPPC3-201ENST00000373159 ZMYM1Q5SVZ6 1142 aa15.53■□□□□ 0.08
TRAPPC3-201ENST00000373159 IQSEC1Q6DN90 963 aa15.53■□□□□ 0.08
TRAPPC3-201ENST00000373159 RCSD1Q6JBY9 416 aa15.53■□□□□ 0.08
TRAPPC3-201ENST00000373159 NOL8Q76FK4 1167 aaKnown RBP15.53■□□□□ 0.08
TRAPPC3-201ENST00000373159 PI4K2BQ8TCG2 481 aa15.53■□□□□ 0.08
TRAPPC3-201ENST00000373159 TRERF1Q96PN7 1200 aa15.53■□□□□ 0.08
TRAPPC3-201ENST00000373159 Q9Y3F1 56 aa15.53■□□□□ 0.08
TRAPPC3-201ENST00000373159 NCOR1O75376 2440 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms