RNA–Protein interactions for RNA: ENST00000371781.3

LCN1-202, Transcript of lipocalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCN1, Length 764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1-202ENST00000371781 PICK1Q9NRD5 415 aa12.53□□□□□ -0.4
LCN1-202ENST00000371781 RBM27Q9P2N5 1060 aaKnown RBP12.53□□□□□ -0.4
LCN1-202ENST00000371781 TFIP11Q9UBB9 837 aaKnown RBP12.53□□□□□ -0.4
LCN1-202ENST00000371781 ISY1Q9ULR0 285 aaKnown RBP12.53□□□□□ -0.4
LCN1-202ENST00000371781 PNMA6FA0A0J9YX94 578 aa12.52□□□□□ -0.41
LCN1-202ENST00000371781 EDIL3O43854 480 aa12.52□□□□□ -0.41
LCN1-202ENST00000371781 PLA2G6O60733 806 aa12.52□□□□□ -0.41
LCN1-202ENST00000371781 PDIA4P13667 645 aaKnown RBP12.52□□□□□ -0.41
LCN1-202ENST00000371781 IREB2P48200 963 aaKnown RBP12.52□□□□□ -0.41
LCN1-202ENST00000371781 MAP2K1Q02750 393 aaPredicted RBP12.52□□□□□ -0.41
LCN1-202ENST00000371781 SH3D19Q5HYK7 790 aa12.52□□□□□ -0.41
LCN1-202ENST00000371781 PAXIP1Q6ZW49 1069 aaPredicted RBP12.52□□□□□ -0.41
LCN1-202ENST00000371781 NOSTRINQ8IVI9 506 aa12.52□□□□□ -0.41
LCN1-202ENST00000371781 LPAR1Q92633 364 aa12.52□□□□□ -0.41
LCN1-202ENST00000371781 FOXP1Q9H334 677 aaPredicted RBP12.52□□□□□ -0.41
LCN1-202ENST00000371781 RPAP3Q9H6T3 665 aaPredicted RBP12.52□□□□□ -0.41
LCN1-202ENST00000371781 SH3GLB2Q9NR46 395 aa12.52□□□□□ -0.41
LCN1-202ENST00000371781 CLIC4Q9Y696 253 aa12.52□□□□□ -0.41
LCN1-202ENST00000371781 ZNF536O15090 1300 aa12.52□□□□□ -0.41
LCN1-202ENST00000371781 ESYT2A0FGR8 921 aa12.51□□□□□ -0.41
LCN1-202ENST00000371781 PPP1R12BO60237 982 aaPredicted RBP12.51□□□□□ -0.41
LCN1-202ENST00000371781 KRT2P35908 639 aa12.51□□□□□ -0.41
LCN1-202ENST00000371781 STAT2P52630 851 aa12.51□□□□□ -0.41
LCN1-202ENST00000371781 NAPAP54920 295 aa12.51□□□□□ -0.41
LCN1-202ENST00000371781 GRM1Q13255 1194 aa12.51□□□□□ -0.41
LCN1-202ENST00000371781 TRIM29Q14134 588 aa12.51□□□□□ -0.41
LCN1-202ENST00000371781 TREML2Q5T2D2 321 aa12.51□□□□□ -0.41
LCN1-202ENST00000371781 CST9Q5W186 159 aa12.51□□□□□ -0.41
LCN1-202ENST00000371781 CYP4F22Q6NT55 531 aa12.51□□□□□ -0.41
LCN1-202ENST00000371781 BRAPQ7Z569 592 aa12.51□□□□□ -0.41
LCN1-202ENST00000371781 ANKRD13AQ8IZ07 590 aa12.51□□□□□ -0.41
LCN1-202ENST00000371781 REPS2Q8NFH8 660 aa12.51□□□□□ -0.41
LCN1-202ENST00000371781 LEO1Q8WVC0 666 aaPredicted RBP12.51□□□□□ -0.41
LCN1-202ENST00000371781 CAPNS2Q96L46 248 aa12.51□□□□□ -0.41
LCN1-202ENST00000371781 ZMYND12Q9H0C1 365 aa12.51□□□□□ -0.41
LCN1-202ENST00000371781 ZNF408Q9H9D4 720 aa12.51□□□□□ -0.41
LCN1-202ENST00000371781 AS3MTQ9HBK9 375 aa12.51□□□□□ -0.41
LCN1-202ENST00000371781 TMEM260Q9NX78 707 aa12.51□□□□□ -0.41
LCN1-202ENST00000371781 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.51□□□□□ -0.41
LCN1-202ENST00000371781 PCDHA6Q9UN73 950 aa12.51□□□□□ -0.41
LCN1-202ENST00000371781 PCDHA4Q9UN74 947 aa12.51□□□□□ -0.41
LCN1-202ENST00000371781 KCNH4Q9UQ05 1017 aa12.51□□□□□ -0.41
LCN1-202ENST00000371781 PCDHA8Q9Y5H6 950 aa12.51□□□□□ -0.41
LCN1-202ENST00000371781 LCTP09848 1927 aa12.5□□□□□ -0.41
LCN1-202ENST00000371781 A0A0G2JLL6 359 aaPredicted RBP12.5□□□□□ -0.41
LCN1-202ENST00000371781 IRF6O14896 467 aa12.5□□□□□ -0.41
LCN1-202ENST00000371781 CLK2P49760 499 aaKnown RBP12.5□□□□□ -0.41
LCN1-202ENST00000371781 NLRP5P59047 1200 aa12.5□□□□□ -0.41
LCN1-202ENST00000371781 PTPAQ15257 358 aa12.5□□□□□ -0.41
LCN1-202ENST00000371781 UBE2SQ16763 222 aa12.5□□□□□ -0.41
LCN1-202ENST00000371781 PPP1R18Q6NYC8 613 aa12.5□□□□□ -0.41
LCN1-202ENST00000371781 PRRT2Q7Z6L0 340 aaPredicted RBP12.5□□□□□ -0.41
LCN1-202ENST00000371781 FAM160B2Q86V87 743 aa12.5□□□□□ -0.41
LCN1-202ENST00000371781 BLIDQ8IZY5 108 aa12.5□□□□□ -0.41
LCN1-202ENST00000371781 GPT2Q8TD30 523 aa12.5□□□□□ -0.41
LCN1-202ENST00000371781 KIFC2Q96AC6 838 aa12.5□□□□□ -0.41
LCN1-202ENST00000371781 OTUD5Q96G74 571 aa12.5□□□□□ -0.41
LCN1-202ENST00000371781 PGBD1Q96JS3 809 aa12.5□□□□□ -0.41
LCN1-202ENST00000371781 SEC63Q9UGP8 760 aaKnown RBP12.5□□□□□ -0.41
LCN1-202ENST00000371781 TSKSQ9UJT2 592 aa12.5□□□□□ -0.41
LCN1-202ENST00000371781 FEM1BQ9UK73 627 aa12.5□□□□□ -0.41
LCN1-202ENST00000371781 PPP1R9AQ9ULJ8 1098 aa12.5□□□□□ -0.41
LCN1-202ENST00000371781 CSADQ9Y600 493 aa12.5□□□□□ -0.41
LCN1-202ENST00000371781 MYH7BA7E2Y1 1941 aa12.49□□□□□ -0.41
LCN1-202ENST00000371781 hCG_1984214I3L0E3 225 aa12.49□□□□□ -0.41
LCN1-202ENST00000371781 NF2P35240 595 aa12.49□□□□□ -0.41
LCN1-202ENST00000371781 NASPP49321 788 aaPredicted RBP12.49□□□□□ -0.41
LCN1-202ENST00000371781 USP14P54578 494 aa12.49□□□□□ -0.41
LCN1-202ENST00000371781 KRT85P78386 507 aa12.49□□□□□ -0.41
LCN1-202ENST00000371781 PPATQ06203 517 aa12.49□□□□□ -0.41
LCN1-202ENST00000371781 PPIL2Q13356 520 aa12.49□□□□□ -0.41
LCN1-202ENST00000371781 TTLL12Q14166 644 aaPredicted RBP12.49□□□□□ -0.41
LCN1-202ENST00000371781 CCDC174Q6PII3 467 aa12.49□□□□□ -0.41
LCN1-202ENST00000371781 ERO1BQ86YB8 467 aa12.49□□□□□ -0.41
LCN1-202ENST00000371781 ZNF713Q8N859 430 aaPredicted RBP12.49□□□□□ -0.41
LCN1-202ENST00000371781 CCDC148Q8NFR7 591 aa12.49□□□□□ -0.41
LCN1-202ENST00000371781 OPTNQ96CV9 577 aa12.49□□□□□ -0.41
LCN1-202ENST00000371781 ATG4CQ96DT6 458 aa12.49□□□□□ -0.41
LCN1-202ENST00000371781 SLF1Q9BQI6 1058 aa12.49□□□□□ -0.41
LCN1-202ENST00000371781 GBA2Q9HCG7 927 aaPredicted RBP12.49□□□□□ -0.41
LCN1-202ENST00000371781 MRVI1Q9Y6F6 885 aa12.49□□□□□ -0.41
LCN1-202ENST00000371781 ELP1O95163 1332 aa12.48□□□□□ -0.41
LCN1-202ENST00000371781 SMCO2A6NFE2 343 aa12.48□□□□□ -0.41
LCN1-202ENST00000371781 DDX11L8A8MPP1 907 aa12.48□□□□□ -0.41
LCN1-202ENST00000371781 C19orf81C9J6K1 198 aa12.48□□□□□ -0.41
LCN1-202ENST00000371781 PEX10O60683 326 aa12.48□□□□□ -0.41
LCN1-202ENST00000371781 AOC2O75106 756 aa12.48□□□□□ -0.41
LCN1-202ENST00000371781 PRPF40AO75400 957 aaKnown RBP12.48□□□□□ -0.41
LCN1-202ENST00000371781 CELF2O95319 508 aaKnown RBP12.48□□□□□ -0.41
LCN1-202ENST00000371781 NCLP19338 710 aaKnown RBP12.48□□□□□ -0.41
LCN1-202ENST00000371781 CEBPZQ03701 1054 aaKnown RBP12.48□□□□□ -0.41
LCN1-202ENST00000371781 IKQ13123 557 aaPredicted RBP12.48□□□□□ -0.41
LCN1-202ENST00000371781 USH1GQ495M9 461 aa12.48□□□□□ -0.41
LCN1-202ENST00000371781 PIK3AP1Q6ZUJ8 805 aa12.48□□□□□ -0.41
LCN1-202ENST00000371781 ARMC9Q7Z3E5 817 aa12.48□□□□□ -0.41
LCN1-202ENST00000371781 FAM177A1Q8N128 213 aaPredicted RBP12.48□□□□□ -0.41
LCN1-202ENST00000371781 LINC00301Q8NCQ3 95 aa12.48□□□□□ -0.41
LCN1-202ENST00000371781 TANGO6Q9C0B7 1094 aa12.48□□□□□ -0.41
LCN1-202ENST00000371781 SLC38A10Q9HBR0 1119 aa12.48□□□□□ -0.41
LCN1-202ENST00000371781 POLR3EQ9NVU0 708 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms