RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 MTMR6Q9Y217 621 aa16.29■□□□□ 0.2
NDC1-201ENST00000371429 SOS2Q07890 1332 aaPredicted RBP16.29■□□□□ 0.2
NDC1-201ENST00000371429 TLDC2A0PJX2 215 aa16.29■□□□□ 0.2
NDC1-201ENST00000371429 LONP1P36776 959 aaKnown RBP16.29■□□□□ 0.2
NDC1-201ENST00000371429 CRKP46108 304 aa16.29■□□□□ 0.2
NDC1-201ENST00000371429 CDK8P49336 464 aa16.29■□□□□ 0.2
NDC1-201ENST00000371429 SFMBT2Q5VUG0 894 aa16.29■□□□□ 0.2
NDC1-201ENST00000371429 IPO4Q8TEX9 1081 aaKnown RBP16.29■□□□□ 0.2
NDC1-201ENST00000371429 CDHR1Q96JP9 859 aa16.29■□□□□ 0.2
NDC1-201ENST00000371429 RIOK1Q9BRS2 568 aaKnown RBP16.29■□□□□ 0.2
NDC1-201ENST00000371429 ZNF521Q96K83 1311 aa16.28■□□□□ 0.2
NDC1-201ENST00000371429 FAM26FQ5R3K3 315 aa16.28■□□□□ 0.2
NDC1-201ENST00000371429 RSPH3Q86UC2 560 aa16.28■□□□□ 0.2
NDC1-201ENST00000371429 CCDC125Q86Z20 511 aa16.28■□□□□ 0.2
NDC1-201ENST00000371429 C2orf69Q8N8R5 385 aa16.28■□□□□ 0.2
NDC1-201ENST00000371429 PCDHA4Q9UN74 947 aa16.28■□□□□ 0.2
NDC1-201ENST00000371429 KIAA1024Q9UPX6 916 aa16.28■□□□□ 0.2
NDC1-201ENST00000371429 SPATA31A6Q5VVP1 1343 aa16.28■□□□□ 0.2
NDC1-201ENST00000371429 SNAP23O00161 211 aa16.28■□□□□ 0.2
NDC1-201ENST00000371429 ARMCX5Q6P1M9 558 aa16.28■□□□□ 0.2
NDC1-201ENST00000371429 TMTC1Q8IUR5 882 aa16.28■□□□□ 0.2
NDC1-201ENST00000371429 RASGRP4Q8TDF6 673 aa16.28■□□□□ 0.2
NDC1-201ENST00000371429 JPH2Q9BR39 696 aaPredicted RBP16.28■□□□□ 0.2
NDC1-201ENST00000371429 RNF181Q9P0P0 153 aa16.28■□□□□ 0.2
NDC1-201ENST00000371429 CPSF1Q10570 1443 aaKnown RBP16.28■□□□□ 0.2
NDC1-201ENST00000371429 ECE2O60344 883 aa16.28■□□□□ 0.2
NDC1-201ENST00000371429 CMA1P23946 247 aa16.28■□□□□ 0.2
NDC1-201ENST00000371429 EPHA10Q5JZY3 1008 aa16.28■□□□□ 0.2
NDC1-201ENST00000371429 ZNF365Q70YC5 407 aa16.28■□□□□ 0.2
NDC1-201ENST00000371429 FAM160B2Q86V87 743 aa16.28■□□□□ 0.2
NDC1-201ENST00000371429 MMS19Q96T76 1030 aa16.28■□□□□ 0.2
NDC1-201ENST00000371429 SEPT9Q9UHD8 586 aaPredicted RBP16.28■□□□□ 0.2
NDC1-201ENST00000371429 OPA1O60313 960 aa16.28■□□□□ 0.2
NDC1-201ENST00000371429 MCAMP43121 646 aa16.28■□□□□ 0.2
NDC1-201ENST00000371429 TFDP1Q14186 410 aa16.28■□□□□ 0.2
NDC1-201ENST00000371429 ZNF341Q9BYN7 854 aa16.28■□□□□ 0.2
NDC1-201ENST00000371429 NUCKS1Q9H1E3 243 aaKnown RBP16.28■□□□□ 0.2
NDC1-201ENST00000371429 STIM2Q9P246 746 aa16.28■□□□□ 0.2
NDC1-201ENST00000371429 KIAA1468Q9P260 1216 aa16.28■□□□□ 0.2
NDC1-201ENST00000371429 STK10O94804 968 aaKnown RBP16.27■□□□□ 0.2
NDC1-201ENST00000371429 RHOXF2BP0C7M4 288 aa16.27■□□□□ 0.2
NDC1-201ENST00000371429 TMEM191BP0C7N4 346 aa16.27■□□□□ 0.2
NDC1-201ENST00000371429 ATF7P17544 494 aaPredicted RBP16.27■□□□□ 0.2
NDC1-201ENST00000371429 VPS72Q15906 364 aa16.27■□□□□ 0.2
NDC1-201ENST00000371429 AOC3Q16853 763 aa16.27■□□□□ 0.2
NDC1-201ENST00000371429 ODR4Q5SWX8 454 aa16.27■□□□□ 0.2
NDC1-201ENST00000371429 RHOXF2Q9BQY4 288 aa16.27■□□□□ 0.2
NDC1-201ENST00000371429 TDRD3Q9H7E2 651 aaKnown RBP16.27■□□□□ 0.2
NDC1-201ENST00000371429 ZSWIM5Q9P217 1185 aa16.27■□□□□ 0.2
NDC1-201ENST00000371429 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.27■□□□□ 0.2
NDC1-201ENST00000371429 V9GYY5 206 aaPredicted RBP16.27■□□□□ 0.2
NDC1-201ENST00000371429 SMIM23A6NLE4 172 aa16.27■□□□□ 0.2
NDC1-201ENST00000371429 PRDX5P30044 214 aa16.27■□□□□ 0.2
NDC1-201ENST00000371429 TRAPPC10P48553 1259 aa16.27■□□□□ 0.2
NDC1-201ENST00000371429 RRAGAQ7L523 313 aa16.27■□□□□ 0.2
NDC1-201ENST00000371429 CCDC127Q96BQ5 260 aa16.27■□□□□ 0.2
NDC1-201ENST00000371429 COA7Q96BR5 231 aa16.27■□□□□ 0.2
NDC1-201ENST00000371429 PNMA3Q9UL41 463 aa16.27■□□□□ 0.2
NDC1-201ENST00000371429 hCG_1984214I3L0E3 225 aa16.27■□□□□ 0.19
NDC1-201ENST00000371429 GH2P01242 217 aa16.27■□□□□ 0.19
NDC1-201ENST00000371429 TMEM179Q6ZVK1 233 aa16.27■□□□□ 0.19
NDC1-201ENST00000371429 EEPD1Q7L9B9 569 aa16.27■□□□□ 0.19
NDC1-201ENST00000371429 ZNF713Q8N859 430 aaPredicted RBP16.27■□□□□ 0.19
NDC1-201ENST00000371429 WDR11Q9BZH6 1224 aa16.27■□□□□ 0.19
NDC1-201ENST00000371429 FMNL1O95466 1100 aaPredicted RBP16.27■□□□□ 0.19
NDC1-201ENST00000371429 DLATP10515 647 aaKnown RBP16.27■□□□□ 0.19
NDC1-201ENST00000371429 NFIXQ14938 502 aa16.27■□□□□ 0.19
NDC1-201ENST00000371429 PPP2R5AQ15172 486 aa16.27■□□□□ 0.19
NDC1-201ENST00000371429 CLIC6Q96NY7 704 aa16.27■□□□□ 0.19
NDC1-201ENST00000371429 ZNF277Q9NRM2 450 aaPredicted RBP16.27■□□□□ 0.19
NDC1-201ENST00000371429 GCFC2P16383 781 aaKnown RBP16.26■□□□□ 0.19
NDC1-201ENST00000371429 STAT1P42224 750 aa16.26■□□□□ 0.19
NDC1-201ENST00000371429 RNASE9P60153 205 aaKnown RBP16.26■□□□□ 0.19
NDC1-201ENST00000371429 CFAP58Q5T655 872 aa16.26■□□□□ 0.19
NDC1-201ENST00000371429 RBSNQ9H1K0 784 aa16.26■□□□□ 0.19
NDC1-201ENST00000371429 ANKFY1Q9P2R3 1169 aa16.26■□□□□ 0.19
NDC1-201ENST00000371429 C1orf167Q5SNV9 1468 aa16.26■□□□□ 0.19
NDC1-201ENST00000371429 GTPBP6O43824 516 aaPredicted RBP16.26■□□□□ 0.19
NDC1-201ENST00000371429 FOXP1Q9H334 677 aaPredicted RBP16.26■□□□□ 0.19
NDC1-201ENST00000371429 C1orf112Q9NSG2 853 aa16.26■□□□□ 0.19
NDC1-201ENST00000371429 PSDA5PKW4 1024 aaPredicted RBP16.26■□□□□ 0.19
NDC1-201ENST00000371429 SESTD1Q86VW0 696 aa16.26■□□□□ 0.19
NDC1-201ENST00000371429 ABI1Q8IZP0 508 aa16.26■□□□□ 0.19
NDC1-201ENST00000371429 GPR161Q8N6U8 529 aaKnown RBP16.26■□□□□ 0.19
NDC1-201ENST00000371429 NSMCE1Q8WV22 266 aa16.26■□□□□ 0.19
NDC1-201ENST00000371429 RPS6KC1Q96S38 1066 aa16.26■□□□□ 0.19
NDC1-201ENST00000371429 MED10Q9BTT4 135 aa16.26■□□□□ 0.19
NDC1-201ENST00000371429 SLC39A2Q9NP94 309 aa16.26■□□□□ 0.19
NDC1-201ENST00000371429 AKT3Q9Y243 479 aa16.26■□□□□ 0.19
NDC1-201ENST00000371429 IQGAP3Q86VI3 1631 aa16.26■□□□□ 0.19
NDC1-201ENST00000371429 LAD1O00515 517 aa16.26■□□□□ 0.19
NDC1-201ENST00000371429 SYMPKQ92797 1274 aaKnown RBP16.26■□□□□ 0.19
NDC1-201ENST00000371429 SECISBP2LQ93073 1101 aaKnown RBP16.26■□□□□ 0.19
NDC1-201ENST00000371429 SPON1Q9HCB6 807 aa16.26■□□□□ 0.19
NDC1-201ENST00000371429 CDHR2Q9BYE9 1310 aa16.25■□□□□ 0.19
NDC1-201ENST00000371429 RETREG2Q8NC44 543 aa16.25■□□□□ 0.19
NDC1-201ENST00000371429 TBCKQ8TEA7 893 aa16.25■□□□□ 0.19
NDC1-201ENST00000371429 PGBD1Q96JS3 809 aa16.25■□□□□ 0.19
NDC1-201ENST00000371429 BRIP1Q9BX63 1249 aa16.25■□□□□ 0.19
NDC1-201ENST00000371429 PCDHA7Q9UN72 937 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms