RNA–Protein interactions for RNA: ENST00000370902.7

EXOSC1-204, Transcript of exosome component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC1, Length 923 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-204ENST00000370902 ECHDC1Q9NTX5 307 aa13.22□□□□□ -0.29
EXOSC1-204ENST00000370902 TMEM39AQ9NV64 488 aa13.22□□□□□ -0.29
EXOSC1-204ENST00000370902 FAM184BQ9ULE4 1060 aa13.22□□□□□ -0.29
EXOSC1-204ENST00000370902 DDX49Q9Y6V7 483 aaKnown RBP13.22□□□□□ -0.29
EXOSC1-204ENST00000370902 TANC1Q9C0D5 1861 aa13.22□□□□□ -0.29
EXOSC1-204ENST00000370902 ELP1O95163 1332 aa13.21□□□□□ -0.29
EXOSC1-204ENST00000370902 PBX2P40425 430 aa13.21□□□□□ -0.29
EXOSC1-204ENST00000370902 CNTN2Q02246 1040 aa13.21□□□□□ -0.29
EXOSC1-204ENST00000370902 CCDC144BQ3MJ40 725 aa13.21□□□□□ -0.29
EXOSC1-204ENST00000370902 MFSD5Q6N075 450 aa13.21□□□□□ -0.29
EXOSC1-204ENST00000370902 ARMCX2Q7L311 632 aa13.21□□□□□ -0.29
EXOSC1-204ENST00000370902 CPXCR1Q8N123 301 aa13.21□□□□□ -0.29
EXOSC1-204ENST00000370902 FAM133AQ8N9E0 248 aa13.21□□□□□ -0.29
EXOSC1-204ENST00000370902 SEC62Q99442 399 aaKnown RBP13.21□□□□□ -0.29
EXOSC1-204ENST00000370902 CLIP2Q9UDT6 1046 aa13.21□□□□□ -0.29
EXOSC1-204ENST00000370902 SYNPO2Q9UMS6 1093 aa13.21□□□□□ -0.29
EXOSC1-204ENST00000370902 GRIN2DO15399 1336 aa13.2□□□□□ -0.3
EXOSC1-204ENST00000370902 UMODL1Q5DID0 1318 aa13.2□□□□□ -0.3
EXOSC1-204ENST00000370902 PTPRSQ13332 1948 aa13.2□□□□□ -0.3
EXOSC1-204ENST00000370902 SOWAHBA6NEL2 793 aa13.2□□□□□ -0.3
EXOSC1-204ENST00000370902 GRXCR1A8MXD5 290 aa13.2□□□□□ -0.3
EXOSC1-204ENST00000370902 MINDY4BA8MYZ0 360 aa13.2□□□□□ -0.3
EXOSC1-204ENST00000370902 RNF113AO15541 343 aaKnown RBP13.2□□□□□ -0.3
EXOSC1-204ENST00000370902 CD4P01730 458 aa13.2□□□□□ -0.3
EXOSC1-204ENST00000370902 OAZ1P54368 228 aa13.2□□□□□ -0.3
EXOSC1-204ENST00000370902 TMEM63BQ5T3F8 832 aa13.2□□□□□ -0.3
EXOSC1-204ENST00000370902 CCDC144CPQ8IYA2 1237 aa13.2□□□□□ -0.3
EXOSC1-204ENST00000370902 SLC43A3Q8NBI5 491 aa13.2□□□□□ -0.3
EXOSC1-204ENST00000370902 PI4K2BQ8TCG2 481 aa13.2□□□□□ -0.3
EXOSC1-204ENST00000370902 NUP133Q8WUM0 1156 aa13.2□□□□□ -0.3
EXOSC1-204ENST00000370902 KIFC2Q96AC6 838 aa13.2□□□□□ -0.3
EXOSC1-204ENST00000370902 DDRGK1Q96HY6 314 aa13.2□□□□□ -0.3
EXOSC1-204ENST00000370902 PBX4Q9BYU1 374 aa13.2□□□□□ -0.3
EXOSC1-204ENST00000370902 ABHD16BQ9H3Z7 469 aa13.2□□□□□ -0.3
EXOSC1-204ENST00000370902 PRDM6Q9NQX0 595 aa13.2□□□□□ -0.3
EXOSC1-204ENST00000370902 GNEQ9Y223 722 aaKnown RBP13.2□□□□□ -0.3
EXOSC1-204ENST00000370902 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.2□□□□□ -0.3
EXOSC1-204ENST00000370902 SCN5AQ14524 2016 aa13.2□□□□□ -0.3
EXOSC1-204ENST00000370902 SALL3Q9BXA9 1300 aa13.19□□□□□ -0.3
EXOSC1-204ENST00000370902 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.19□□□□□ -0.3
EXOSC1-204ENST00000370902 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.19□□□□□ -0.3
EXOSC1-204ENST00000370902 DCDC2CA8MYV0 355 aa13.19□□□□□ -0.3
EXOSC1-204ENST00000370902 ARVCFO00192 962 aa13.19□□□□□ -0.3
EXOSC1-204ENST00000370902 C6orf222P0C671 652 aaPredicted RBP13.19□□□□□ -0.3
EXOSC1-204ENST00000370902 CSF2RAP15509 400 aa13.19□□□□□ -0.3
EXOSC1-204ENST00000370902 IFNL3Q8IZI9 196 aa13.19□□□□□ -0.3
EXOSC1-204ENST00000370902 CHST13Q8NET6 341 aa13.19□□□□□ -0.3
EXOSC1-204ENST00000370902 NEDD1Q8NHV4 660 aa13.19□□□□□ -0.3
EXOSC1-204ENST00000370902 OTUD7AQ8TE49 926 aaPredicted RBP13.19□□□□□ -0.3
EXOSC1-204ENST00000370902 DDX11Q96FC9 970 aa13.19□□□□□ -0.3
EXOSC1-204ENST00000370902 DCTPP1Q9H773 170 aa13.19□□□□□ -0.3
EXOSC1-204ENST00000370902 MKNK2Q9HBH9 465 aa13.19□□□□□ -0.3
EXOSC1-204ENST00000370902 A1CFQ9NQ94 594 aaKnown RBP13.19□□□□□ -0.3
EXOSC1-204ENST00000370902 FEM1BQ9UK73 627 aa13.19□□□□□ -0.3
EXOSC1-204ENST00000370902 RCAN3Q9UKA8 241 aa13.19□□□□□ -0.3
EXOSC1-204ENST00000370902 SCN10AQ9Y5Y9 1956 aa13.18□□□□□ -0.3
EXOSC1-204ENST00000370902 A0A0U1RQG5 324 aaPredicted RBP13.18□□□□□ -0.3
EXOSC1-204ENST00000370902 TTLL1O95922 423 aa13.18□□□□□ -0.3
EXOSC1-204ENST00000370902 NOVP48745 357 aa13.18□□□□□ -0.3
EXOSC1-204ENST00000370902 BEX3Q00994 111 aa13.18□□□□□ -0.3
EXOSC1-204ENST00000370902 TIFAQ96CG3 184 aa13.18□□□□□ -0.3
EXOSC1-204ENST00000370902 GLT1D1Q96MS3 346 aa13.18□□□□□ -0.3
EXOSC1-204ENST00000370902 ZNF576Q9H609 170 aa13.18□□□□□ -0.3
EXOSC1-204ENST00000370902 CXXC1Q9P0U4 656 aaPredicted RBP13.18□□□□□ -0.3
EXOSC1-204ENST00000370902 MROH7Q68CQ1 1323 aa13.17□□□□□ -0.3
EXOSC1-204ENST00000370902 ZBED4O75132 1171 aa13.17□□□□□ -0.3
EXOSC1-204ENST00000370902 ACRP10323 421 aa13.17□□□□□ -0.3
EXOSC1-204ENST00000370902 BMP3P12645 472 aa13.17□□□□□ -0.3
EXOSC1-204ENST00000370902 TDO2P48775 406 aa13.17□□□□□ -0.3
EXOSC1-204ENST00000370902 ADGRE1Q14246 886 aa13.17□□□□□ -0.3
EXOSC1-204ENST00000370902 SLFN13Q68D06 897 aa13.17□□□□□ -0.3
EXOSC1-204ENST00000370902 ANKRD35Q8N283 1001 aa13.17□□□□□ -0.3
EXOSC1-204ENST00000370902 PCSK9Q8NBP7 692 aaKnown RBP13.17□□□□□ -0.3
EXOSC1-204ENST00000370902 GMCL1Q96IK5 515 aa13.17□□□□□ -0.3
EXOSC1-204ENST00000370902 AGBL1Q96MI9 1066 aa13.17□□□□□ -0.3
EXOSC1-204ENST00000370902 PPP1R12CQ9BZL4 782 aa13.17□□□□□ -0.3
EXOSC1-204ENST00000370902 WNT8AQ9H1J5 351 aa13.17□□□□□ -0.3
EXOSC1-204ENST00000370902 IL17RBQ9NRM6 502 aa13.17□□□□□ -0.3
EXOSC1-204ENST00000370902 HOMER2Q9NSB8 354 aa13.17□□□□□ -0.3
EXOSC1-204ENST00000370902 FBXO40Q9UH90 709 aa13.17□□□□□ -0.3
EXOSC1-204ENST00000370902 COL4A4P53420 1690 aaPredicted RBP13.17□□□□□ -0.3
EXOSC1-204ENST00000370902 NCOR1O75376 2440 aa13.17□□□□□ -0.3
EXOSC1-204ENST00000370902 LAMA4Q16363 1823 aa13.16□□□□□ -0.3
EXOSC1-204ENST00000370902 MYO9BQ13459 2157 aa13.16□□□□□ -0.3
EXOSC1-204ENST00000370902 PATL2C9JE40 543 aaKnown RBP13.16□□□□□ -0.3
EXOSC1-204ENST00000370902 TMEM232C9JQI7 657 aa13.16□□□□□ -0.3
EXOSC1-204ENST00000370902 ZFYP08048 801 aaPredicted RBP13.16□□□□□ -0.3
EXOSC1-204ENST00000370902 GNAT2P19087 354 aa13.16□□□□□ -0.3
EXOSC1-204ENST00000370902 CYP2C18P33260 490 aa13.16□□□□□ -0.3
EXOSC1-204ENST00000370902 SLC4A3P48751 1232 aa13.16□□□□□ -0.3
EXOSC1-204ENST00000370902 PPARAQ07869 468 aa13.16□□□□□ -0.3
EXOSC1-204ENST00000370902 PPIGQ13427 754 aaKnown RBP eCLIP13.16□□□□□ -0.39e-6■■□□□ 12.8
EXOSC1-204ENST00000370902 MUM1L1Q5H9M0 696 aa13.16□□□□□ -0.3
EXOSC1-204ENST00000370902 ZMYM1Q5SVZ6 1142 aa13.16□□□□□ -0.3
EXOSC1-204ENST00000370902 TAPT1Q6NXT6 567 aa13.16□□□□□ -0.3
EXOSC1-204ENST00000370902 CXCL17Q6UXB2 119 aa13.16□□□□□ -0.3
EXOSC1-204ENST00000370902 ZNF365Q70YC5 407 aa13.16□□□□□ -0.3
EXOSC1-204ENST00000370902 PURBQ96QR8 312 aaKnown RBP13.16□□□□□ -0.3
EXOSC1-204ENST00000370902 ACAD9Q9H845 621 aa13.16□□□□□ -0.3
EXOSC1-204ENST00000370902 INCENPQ9NQS7 918 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms