RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 STXBP5LQ9Y2K9 1186 aa17.88■□□□□ 0.45
SS18L1-202ENST00000370848 ADAMTS4O75173 837 aa17.87■□□□□ 0.45
SS18L1-202ENST00000370848 OAZ1P54368 228 aa17.87■□□□□ 0.45
SS18L1-202ENST00000370848 MDM2Q00987 491 aaPredicted RBP17.87■□□□□ 0.45
SS18L1-202ENST00000370848 IMMTQ16891 758 aaKnown RBP17.87■□□□□ 0.45
SS18L1-202ENST00000370848 PRAMEF19Q5SWL8 479 aa17.87■□□□□ 0.45
SS18L1-202ENST00000370848 DEFB123Q8N688 67 aa17.87■□□□□ 0.45
SS18L1-202ENST00000370848 SLC38A10Q9HBR0 1119 aa17.87■□□□□ 0.45
SS18L1-202ENST00000370848 CTNNA3Q9UI47 895 aa17.87■□□□□ 0.45
SS18L1-202ENST00000370848 STX8Q9UNK0 236 aa17.87■□□□□ 0.45
SS18L1-202ENST00000370848 CDH23Q9H251 3354 aa17.86■□□□□ 0.45
SS18L1-202ENST00000370848 PGK2P07205 417 aa17.86■□□□□ 0.45
SS18L1-202ENST00000370848 RARBP10826 455 aa17.86■□□□□ 0.45
SS18L1-202ENST00000370848 AKR1A1P14550 325 aa17.86■□□□□ 0.45
SS18L1-202ENST00000370848 ATN1P54259 1190 aaPredicted RBP17.86■□□□□ 0.45
SS18L1-202ENST00000370848 ZKSCAN3Q9BRR0 538 aa17.86■□□□□ 0.45
SS18L1-202ENST00000370848 LSG1Q9H089 658 aaKnown RBP17.86■□□□□ 0.45
SS18L1-202ENST00000370848 RNF41Q9H4P4 317 aaPredicted RBP17.86■□□□□ 0.45
SS18L1-202ENST00000370848 XPNPEP3Q9NQH7 507 aa17.86■□□□□ 0.45
SS18L1-202ENST00000370848 PDLIM7Q9NR12 457 aa17.86■□□□□ 0.45
SS18L1-202ENST00000370848 LAMA4Q16363 1823 aa17.86■□□□□ 0.45
SS18L1-202ENST00000370848 B4E1Z4 1266 aa17.85■□□□□ 0.45
SS18L1-202ENST00000370848 CDC45O75419 566 aa17.85■□□□□ 0.45
SS18L1-202ENST00000370848 CYP21A2P08686 494 aa17.85■□□□□ 0.45
SS18L1-202ENST00000370848 FDX1P10109 184 aa17.85■□□□□ 0.45
SS18L1-202ENST00000370848 ADCYAP1R1P41586 468 aa17.85■□□□□ 0.45
SS18L1-202ENST00000370848 NOVP48745 357 aa17.85■□□□□ 0.45
SS18L1-202ENST00000370848 ANO1Q5XXA6 986 aa17.85■□□□□ 0.45
SS18L1-202ENST00000370848 SNRNP48Q6IEG0 339 aaKnown RBP17.85■□□□□ 0.45
SS18L1-202ENST00000370848 LBHD1Q9BQE6 289 aaPredicted RBP17.85■□□□□ 0.45
SS18L1-202ENST00000370848 TSEN34Q9BSV6 310 aaKnown RBP17.85■□□□□ 0.45
SS18L1-202ENST00000370848 FEM1BQ9UK73 627 aa17.85■□□□□ 0.45
SS18L1-202ENST00000370848 MTMR7Q9Y216 660 aa17.85■□□□□ 0.45
SS18L1-202ENST00000370848 RIPK3Q9Y572 518 aa17.85■□□□□ 0.45
SS18L1-202ENST00000370848 RBM8AQ9Y5S9 174 aaKnown RBP17.85■□□□□ 0.45
SS18L1-202ENST00000370848 PLA2G6O60733 806 aa17.84■□□□□ 0.45
SS18L1-202ENST00000370848 KDM4AO75164 1064 aa17.84■□□□□ 0.45
SS18L1-202ENST00000370848 PCP11498 1178 aaKnown RBP17.84■□□□□ 0.45
SS18L1-202ENST00000370848 TAL1P17542 331 aaPredicted RBP17.84■□□□□ 0.45
SS18L1-202ENST00000370848 CST5P28325 142 aaPredicted RBP17.84■□□□□ 0.45
SS18L1-202ENST00000370848 NKX3-2P78367 333 aa17.84■□□□□ 0.45
SS18L1-202ENST00000370848 TRIM60Q495X7 471 aa17.84■□□□□ 0.45
SS18L1-202ENST00000370848 SLFN13Q68D06 897 aa17.84■□□□□ 0.45
SS18L1-202ENST00000370848 CCSAPQ6IQ19 270 aaPredicted RBP17.84■□□□□ 0.45
SS18L1-202ENST00000370848 RNF180Q86T96 592 aa17.84■□□□□ 0.45
SS18L1-202ENST00000370848 ESR2Q92731 530 aa17.84■□□□□ 0.45
SS18L1-202ENST00000370848 MAP4K1Q92918 833 aa17.84■□□□□ 0.45
SS18L1-202ENST00000370848 GMCL1Q96IK5 515 aa17.84■□□□□ 0.45
SS18L1-202ENST00000370848 FGD4Q96M96 766 aa17.84■□□□□ 0.45
SS18L1-202ENST00000370848 PRKAG2Q9UGJ0 569 aa17.84■□□□□ 0.45
SS18L1-202ENST00000370848 FBXO40Q9UH90 709 aa17.84■□□□□ 0.45
SS18L1-202ENST00000370848 U3KPZ7 1027 aaPredicted RBP17.84■□□□□ 0.45
SS18L1-202ENST00000370848 CUL9Q8IWT3 2517 aa17.84■□□□□ 0.45
SS18L1-202ENST00000370848 LRRC37A2A6NM11 1700 aa17.84■□□□□ 0.45
SS18L1-202ENST00000370848 SNAI1O95863 264 aaPredicted RBP17.83■□□□□ 0.44
SS18L1-202ENST00000370848 RCSD1Q6JBY9 416 aa17.83■□□□□ 0.44
SS18L1-202ENST00000370848 STOX1Q6ZVD7 989 aa17.83■□□□□ 0.44
SS18L1-202ENST00000370848 Q7L0L9 218 aa17.83■□□□□ 0.44
SS18L1-202ENST00000370848 KLHDC9Q8NEP7 349 aa17.83■□□□□ 0.44
SS18L1-202ENST00000370848 CHST13Q8NET6 341 aa17.83■□□□□ 0.44
SS18L1-202ENST00000370848 TMEM47Q9BQJ4 181 aa17.83■□□□□ 0.44
SS18L1-202ENST00000370848 ANO2Q9NQ90 1003 aa17.83■□□□□ 0.44
SS18L1-202ENST00000370848 TCP11L1Q9NUJ3 509 aa17.83■□□□□ 0.44
SS18L1-202ENST00000370848 CNPY2Q9Y2B0 182 aa17.83■□□□□ 0.44
SS18L1-202ENST00000370848 ATP11BQ9Y2G3 1177 aa17.83■□□□□ 0.44
SS18L1-202ENST00000370848 EYSQ5T1H1 3165 aa17.83■□□□□ 0.44
SS18L1-202ENST00000370848 TRIM43BA6NCK2 446 aa17.82■□□□□ 0.44
SS18L1-202ENST00000370848 MCCP23508 829 aa17.82■□□□□ 0.44
SS18L1-202ENST00000370848 PPP4R3BQ5MIZ7 849 aa17.82■□□□□ 0.44
SS18L1-202ENST00000370848 ANKRD33Q7Z3H0 272 aa17.82■□□□□ 0.44
SS18L1-202ENST00000370848 TRIM43Q96BQ3 446 aaPredicted RBP17.82■□□□□ 0.44
SS18L1-202ENST00000370848 TOX2Q96NM4 488 aa17.82■□□□□ 0.44
SS18L1-202ENST00000370848 SYNRGQ9UMZ2 1314 aa17.81■□□□□ 0.44
SS18L1-202ENST00000370848 A0A1W2PQ45 241 aaPredicted RBP17.81■□□□□ 0.44
SS18L1-202ENST00000370848 A0A1W2PQY0 241 aa17.81■□□□□ 0.44
SS18L1-202ENST00000370848 MOXD2PA6NHM9 499 aa17.81■□□□□ 0.44
SS18L1-202ENST00000370848 KIAA0355O15063 1070 aa17.81■□□□□ 0.44
SS18L1-202ENST00000370848 ZBED4O75132 1171 aa17.81■□□□□ 0.44
SS18L1-202ENST00000370848 DUSP11O75319 330 aaKnown RBP17.81■□□□□ 0.44
SS18L1-202ENST00000370848 KIAA1211Q6ZU35 1233 aa17.81■□□□□ 0.44
SS18L1-202ENST00000370848 CYB5R4Q7L1T6 521 aa17.81■□□□□ 0.44
SS18L1-202ENST00000370848 KATNBL1Q9H079 304 aa17.81■□□□□ 0.44
SS18L1-202ENST00000370848 UPF3AQ9H1J1 476 aaKnown RBP17.81■□□□□ 0.44
SS18L1-202ENST00000370848 ZSWIM5Q9P217 1185 aa17.81■□□□□ 0.44
SS18L1-202ENST00000370848 ISY1Q9ULR0 285 aaKnown RBP17.81■□□□□ 0.44
SS18L1-202ENST00000370848 ZNF536O15090 1300 aa17.8■□□□□ 0.44
SS18L1-202ENST00000370848 PGK1P00558 417 aa17.8■□□□□ 0.44
SS18L1-202ENST00000370848 TOP1P11387 765 aaKnown RBP17.8■□□□□ 0.44
SS18L1-202ENST00000370848 BMP3P12645 472 aa17.8■□□□□ 0.44
SS18L1-202ENST00000370848 TLE2Q04725 743 aa17.8■□□□□ 0.44
SS18L1-202ENST00000370848 COL9A3Q14050 684 aaPredicted RBP17.8■□□□□ 0.44
SS18L1-202ENST00000370848 KCTD1Q719H9 257 aa17.8■□□□□ 0.44
SS18L1-202ENST00000370848 SH3RF1Q7Z6J0 888 aa17.8■□□□□ 0.44
SS18L1-202ENST00000370848 SLC17A8Q8NDX2 589 aa17.8■□□□□ 0.44
SS18L1-202ENST00000370848 ABHD16BQ9H3Z7 469 aa17.8■□□□□ 0.44
SS18L1-202ENST00000370848 FAM184BQ9ULE4 1060 aa17.8■□□□□ 0.44
SS18L1-202ENST00000370848 MCM3APO60318 1980 aa17.8■□□□□ 0.44
SS18L1-202ENST00000370848 TMEM232C9JQI7 657 aa17.79■□□□□ 0.44
SS18L1-202ENST00000370848 E7EWF7 191 aa17.79■□□□□ 0.44
SS18L1-202ENST00000370848 CLTBP09497 229 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms