RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 PSRC1Q6PGN9 363 aaPredicted RBP18.49■□□□□ 0.55
SSR4-204ENST00000370087 ARMCX2Q7L311 632 aa18.49■□□□□ 0.55
SSR4-204ENST00000370087 TMEM199Q8N511 208 aa18.49■□□□□ 0.55
SSR4-204ENST00000370087 VTI1AQ96AJ9 217 aa18.49■□□□□ 0.55
SSR4-204ENST00000370087 KIF1BPQ96EK5 621 aa18.49■□□□□ 0.55
SSR4-204ENST00000370087 NECAB3Q96P71 396 aaPredicted RBP18.49■□□□□ 0.55
SSR4-204ENST00000370087 PUS7LQ9H0K6 701 aaKnown RBP18.49■□□□□ 0.55
SSR4-204ENST00000370087 RAVER2Q9HCJ3 691 aaKnown RBP18.49■□□□□ 0.55
SSR4-204ENST00000370087 F5H6K3 240 aa18.48■□□□□ 0.55
SSR4-204ENST00000370087 IGFBP4P22692 258 aa18.48■□□□□ 0.55
SSR4-204ENST00000370087 KLRC3Q07444 240 aa18.48■□□□□ 0.55
SSR4-204ENST00000370087 GNASQ5JWF2 1037 aa18.48■□□□□ 0.55
SSR4-204ENST00000370087 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.48■□□□□ 0.55
SSR4-204ENST00000370087 AMOTL1Q8IY63 956 aa18.48■□□□□ 0.55
SSR4-204ENST00000370087 PCSK9Q8NBP7 692 aaKnown RBP18.48■□□□□ 0.55
SSR4-204ENST00000370087 HERVK_113Q902F9 699 aa18.48■□□□□ 0.55
SSR4-204ENST00000370087 UHRF1Q96T88 793 aaPredicted RBP18.48■□□□□ 0.55
SSR4-204ENST00000370087 HAUS7Q99871 368 aa18.48■□□□□ 0.55
SSR4-204ENST00000370087 IL23AQ9NPF7 189 aa18.48■□□□□ 0.55
SSR4-204ENST00000370087 DDX49Q9Y6V7 483 aaKnown RBP18.48■□□□□ 0.55
SSR4-204ENST00000370087 ATP2A1O14983 1001 aa18.47■□□□□ 0.55
SSR4-204ENST00000370087 ATP5JP18859 108 aa18.47■□□□□ 0.55
SSR4-204ENST00000370087 MRPS5P82675 430 aaKnown RBP18.47■□□□□ 0.55
SSR4-204ENST00000370087 UBE3CQ15386 1083 aa18.47■□□□□ 0.55
SSR4-204ENST00000370087 CCDC174Q6PII3 467 aa18.47■□□□□ 0.55
SSR4-204ENST00000370087 CCDC144CPQ8IYA2 1237 aa18.47■□□□□ 0.55
SSR4-204ENST00000370087 KIFC2Q96AC6 838 aa18.47■□□□□ 0.55
SSR4-204ENST00000370087 VWCEQ96DN2 955 aa18.47■□□□□ 0.55
SSR4-204ENST00000370087 ABHD16BQ9H3Z7 469 aa18.47■□□□□ 0.55
SSR4-204ENST00000370087 SLC38A10Q9HBR0 1119 aa18.47■□□□□ 0.55
SSR4-204ENST00000370087 GRIN2DO15399 1336 aa18.47■□□□□ 0.55
SSR4-204ENST00000370087 SCN5AQ14524 2016 aa18.46■□□□□ 0.55
SSR4-204ENST00000370087 IGKV6D-41A0A0C4DH26 115 aa18.46■□□□□ 0.55
SSR4-204ENST00000370087 MYOGP15173 224 aa18.46■□□□□ 0.55
SSR4-204ENST00000370087 RABGGTBP53611 331 aa18.46■□□□□ 0.55
SSR4-204ENST00000370087 CNTN2Q02246 1040 aa18.46■□□□□ 0.55
SSR4-204ENST00000370087 RAB30Q15771 203 aa18.46■□□□□ 0.55
SSR4-204ENST00000370087 CXCL17Q6UXB2 119 aa18.46■□□□□ 0.55
SSR4-204ENST00000370087 PRPF38AQ8NAV1 312 aaKnown RBP18.46■□□□□ 0.55
SSR4-204ENST00000370087 SLC43A3Q8NBI5 491 aa18.46■□□□□ 0.55
SSR4-204ENST00000370087 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.46■□□□□ 0.55
SSR4-204ENST00000370087 NYAP2Q9P242 653 aa18.46■□□□□ 0.55
SSR4-204ENST00000370087 ARPP21Q9UBL0 812 aaPredicted RBP18.46■□□□□ 0.55
SSR4-204ENST00000370087 TLR3O15455 904 aaKnown RBP18.45■□□□□ 0.54
SSR4-204ENST00000370087 NKX3-2P78367 333 aa18.45■□□□□ 0.54
SSR4-204ENST00000370087 OTOP2Q7RTS6 562 aa18.45■□□□□ 0.54
SSR4-204ENST00000370087 ANKRD35Q8N283 1001 aa18.45■□□□□ 0.54
SSR4-204ENST00000370087 WNT8AQ9H1J5 351 aa18.45■□□□□ 0.54
SSR4-204ENST00000370087 HOMER2Q9NSB8 354 aa18.45■□□□□ 0.54
SSR4-204ENST00000370087 MSRAQ9UJ68 235 aa18.45■□□□□ 0.54
SSR4-204ENST00000370087 ZBED4O75132 1171 aa18.44■□□□□ 0.54
SSR4-204ENST00000370087 CCL23P55773 120 aa18.44■□□□□ 0.54
SSR4-204ENST00000370087 TFF2Q03403 129 aa18.44■□□□□ 0.54
SSR4-204ENST00000370087 TMEM63BQ5T3F8 832 aa18.44■□□□□ 0.54
SSR4-204ENST00000370087 LRRC47Q8N1G4 583 aaKnown RBP18.44■□□□□ 0.54
SSR4-204ENST00000370087 DDRGK1Q96HY6 314 aa18.44■□□□□ 0.54
SSR4-204ENST00000370087 TRPV6Q9H1D0 765 aa18.44■□□□□ 0.54
SSR4-204ENST00000370087 HIPK3Q9H422 1215 aa18.44■□□□□ 0.54
SSR4-204ENST00000370087 SPC25Q9HBM1 224 aa18.44■□□□□ 0.54
SSR4-204ENST00000370087 CLIP2Q9UDT6 1046 aa18.44■□□□□ 0.54
SSR4-204ENST00000370087 SOWAHBA6NEL2 793 aa18.43■□□□□ 0.54
SSR4-204ENST00000370087 GSG1L2A8MUP6 293 aa18.43■□□□□ 0.54
SSR4-204ENST00000370087 FGBP02675 491 aa18.43■□□□□ 0.54
SSR4-204ENST00000370087 PLA2G5P39877 138 aa18.43■□□□□ 0.54
SSR4-204ENST00000370087 SBK1Q52WX2 424 aa18.43■□□□□ 0.54
SSR4-204ENST00000370087 MICALL1Q8N3F8 863 aa18.43■□□□□ 0.54
SSR4-204ENST00000370087 FAM133AQ8N9E0 248 aa18.43■□□□□ 0.54
SSR4-204ENST00000370087 CEP95Q96GE4 821 aa18.43■□□□□ 0.54
SSR4-204ENST00000370087 STRBPQ96SI9 672 aaKnown RBP18.43■□□□□ 0.54
SSR4-204ENST00000370087 NOC4LQ9BVI4 516 aaKnown RBP18.43■□□□□ 0.54
SSR4-204ENST00000370087 EPB41L4AQ9HCS5 686 aaPredicted RBP18.43■□□□□ 0.54
SSR4-204ENST00000370087 GNEQ9Y223 722 aaKnown RBP18.43■□□□□ 0.54
SSR4-204ENST00000370087 NCOR1O75376 2440 aa18.42■□□□□ 0.54
SSR4-204ENST00000370087 COL4A4P53420 1690 aaPredicted RBP18.42■□□□□ 0.54
SSR4-204ENST00000370087 MINDY4BA8MYZ0 360 aa18.42■□□□□ 0.54
SSR4-204ENST00000370087 B4GALT4O60513 344 aa18.42■□□□□ 0.54
SSR4-204ENST00000370087 PRDM1O75626 825 aa18.42■□□□□ 0.54
SSR4-204ENST00000370087 PSMC6P62333 389 aa18.42■□□□□ 0.54
SSR4-204ENST00000370087 TNFAIP2Q03169 654 aa18.42■□□□□ 0.54
SSR4-204ENST00000370087 TLK2Q86UE8 772 aa18.42■□□□□ 0.54
SSR4-204ENST00000370087 CHST13Q8NET6 341 aa18.42■□□□□ 0.54
SSR4-204ENST00000370087 SLC28A3Q9HAS3 691 aa18.42■□□□□ 0.54
SSR4-204ENST00000370087 MKNK2Q9HBH9 465 aa18.42■□□□□ 0.54
SSR4-204ENST00000370087 TANC1Q9C0D5 1861 aa18.41■□□□□ 0.54
SSR4-204ENST00000370087 PTPRSQ13332 1948 aa18.41■□□□□ 0.54
SSR4-204ENST00000370087 BMP1P13497 986 aa18.41■□□□□ 0.54
SSR4-204ENST00000370087 KCNQ1P51787 676 aa18.41■□□□□ 0.54
SSR4-204ENST00000370087 ITGA7Q13683 1181 aa18.41■□□□□ 0.54
SSR4-204ENST00000370087 FSCN1Q16658 493 aaKnown RBP18.41■□□□□ 0.54
SSR4-204ENST00000370087 CHMP4CQ96CF2 233 aa18.41■□□□□ 0.54
SSR4-204ENST00000370087 SCLYQ96I15 445 aa18.41■□□□□ 0.54
SSR4-204ENST00000370087 A1CFQ9NQ94 594 aaKnown RBP18.41■□□□□ 0.54
SSR4-204ENST00000370087 PDGFCQ9NRA1 345 aa18.41■□□□□ 0.54
SSR4-204ENST00000370087 FBXO40Q9UH90 709 aa18.41■□□□□ 0.54
SSR4-204ENST00000370087 CTDP1Q9Y5B0 961 aaPredicted RBP18.41■□□□□ 0.54
SSR4-204ENST00000370087 ZNF536O15090 1300 aa18.41■□□□□ 0.54
SSR4-204ENST00000370087 RFXAPO00287 272 aa18.4■□□□□ 0.54
SSR4-204ENST00000370087 SMARCA5O60264 1052 aaPredicted RBP18.4■□□□□ 0.54
SSR4-204ENST00000370087 RAB11FIP3O75154 756 aa18.4■□□□□ 0.54
SSR4-204ENST00000370087 SMPD1P17405 629 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms