RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 KCNG4Q8TDN1 519 aa27.38■■□□□ 1.97
SNX3-203ENST00000368979 EMILIN3Q9NT22 766 aa27.38■■□□□ 1.97
SNX3-203ENST00000368979 IREB2P48200 963 aaKnown RBP27.37■■□□□ 1.97
SNX3-203ENST00000368979 SLC39A14Q15043 492 aa27.37■■□□□ 1.97
SNX3-203ENST00000368979 PIK3AP1Q6ZUJ8 805 aa27.37■■□□□ 1.97
SNX3-203ENST00000368979 NOL7Q9UMY1 257 aaKnown RBP27.37■■□□□ 1.97
SNX3-203ENST00000368979 ZHX2Q9Y6X8 837 aa27.37■■□□□ 1.97
SNX3-203ENST00000368979 SPTLC2O15270 562 aa27.36■■□□□ 1.97
SNX3-203ENST00000368979 POTEIP0CG38 1075 aa27.36■■□□□ 1.97
SNX3-203ENST00000368979 POTEJP0CG39 1038 aa27.36■■□□□ 1.97
SNX3-203ENST00000368979 RASGRP4Q8TDF6 673 aa27.36■■□□□ 1.97
SNX3-203ENST00000368979 C12orf42Q96LP6 360 aa27.36■■□□□ 1.97
SNX3-203ENST00000368979 TRAPPC10P48553 1259 aa27.36■■□□□ 1.97
SNX3-203ENST00000368979 ADCY7P51828 1080 aa27.36■■□□□ 1.97
SNX3-203ENST00000368979 DGKZQ13574 1117 aa27.36■■□□□ 1.97
SNX3-203ENST00000368979 MAP3K11Q16584 847 aa27.36■■□□□ 1.97
SNX3-203ENST00000368979 BICD2Q8TD16 824 aa27.36■■□□□ 1.97
SNX3-203ENST00000368979 AMNQ9BXJ7 453 aa27.36■■□□□ 1.97
SNX3-203ENST00000368979 RANBP17Q9H2T7 1088 aaKnown RBP27.36■■□□□ 1.97
SNX3-203ENST00000368979 VCAM1P19320 739 aa27.35■■□□□ 1.97
SNX3-203ENST00000368979 SNAP25P60880 206 aa27.35■■□□□ 1.97
SNX3-203ENST00000368979 RIC8AQ9NPQ8 531 aa27.35■■□□□ 1.97
SNX3-203ENST00000368979 CLEC11AQ9Y240 323 aa27.35■■□□□ 1.97
SNX3-203ENST00000368979 AFG3L2Q9Y4W6 797 aa27.35■■□□□ 1.97
SNX3-203ENST00000368979 PCDHB6Q9Y5E3 794 aa27.35■■□□□ 1.97
SNX3-203ENST00000368979 TRIM75PA6NK02 468 aa27.34■■□□□ 1.97
SNX3-203ENST00000368979 C19orf81C9J6K1 198 aa27.34■■□□□ 1.97
SNX3-203ENST00000368979 PPP6R2O75170 966 aa27.34■■□□□ 1.97
SNX3-203ENST00000368979 FBXO11Q86XK2 927 aa27.34■■□□□ 1.97
SNX3-203ENST00000368979 RRAGCQ9HB90 399 aa27.34■■□□□ 1.97
SNX3-203ENST00000368979 FBXO28Q9NVF7 368 aa27.34■■□□□ 1.97
SNX3-203ENST00000368979 PCDHA7Q9UN72 937 aa27.34■■□□□ 1.97
SNX3-203ENST00000368979 PCDHA1Q9Y5I3 950 aa27.34■■□□□ 1.97
SNX3-203ENST00000368979 CSADQ9Y600 493 aa27.34■■□□□ 1.97
SNX3-203ENST00000368979 CCDC194A0A1B0GVG4 234 aa27.33■■□□□ 1.97
SNX3-203ENST00000368979 GOLGA6L4A6NEF3 574 aa27.33■■□□□ 1.97
SNX3-203ENST00000368979 ME1P48163 572 aa27.33■■□□□ 1.97
SNX3-203ENST00000368979 KRT25Q7Z3Z0 450 aa27.33■■□□□ 1.97
SNX3-203ENST00000368979 REXO1Q8N1G1 1221 aaKnown RBP27.33■■□□□ 1.97
SNX3-203ENST00000368979 KIFC2Q96AC6 838 aa27.33■■□□□ 1.97
SNX3-203ENST00000368979 EIF4ENIF1Q9NRA8 985 aaKnown RBP27.33■■□□□ 1.97
SNX3-203ENST00000368979 MORC2Q9Y6X9 1032 aaPredicted RBP27.33■■□□□ 1.97
SNX3-203ENST00000368979 PARP14Q460N5 1801 aa27.32■■□□□ 1.96
SNX3-203ENST00000368979 CAVIN1Q6NZI2 390 aaKnown RBP27.32■■□□□ 1.96
SNX3-203ENST00000368979 WNT7AO00755 349 aa27.31■■□□□ 1.96
SNX3-203ENST00000368979 TPRNQ4KMQ1 711 aa27.31■■□□□ 1.96
SNX3-203ENST00000368979 TTC38Q5R3I4 469 aa27.31■■□□□ 1.96
SNX3-203ENST00000368979 ANKRD13AQ8IZ07 590 aa27.31■■□□□ 1.96
SNX3-203ENST00000368979 CUL5Q93034 780 aa27.31■■□□□ 1.96
SNX3-203ENST00000368979 SLF1Q9BQI6 1058 aa27.31■■□□□ 1.96
SNX3-203ENST00000368979 CEP131Q9UPN4 1083 aa27.31■■□□□ 1.96
SNX3-203ENST00000368979 ATP2B1P20020 1258 aa27.31■■□□□ 1.96
SNX3-203ENST00000368979 CLK2P49760 499 aaKnown RBP27.31■■□□□ 1.96
SNX3-203ENST00000368979 HMGCS2P54868 508 aa27.31■■□□□ 1.96
SNX3-203ENST00000368979 SH3D19Q5HYK7 790 aa27.31■■□□□ 1.96
SNX3-203ENST00000368979 MAP1SQ66K74 1059 aaPredicted RBP27.31■■□□□ 1.96
SNX3-203ENST00000368979 ADALQ6DHV7 355 aa27.31■■□□□ 1.96
SNX3-203ENST00000368979 JMYQ8N9B5 988 aa27.31■■□□□ 1.96
SNX3-203ENST00000368979 GLT8D2Q9H1C3 349 aa27.31■■□□□ 1.96
SNX3-203ENST00000368979 RPAP3Q9H6T3 665 aaPredicted RBP27.31■■□□□ 1.96
SNX3-203ENST00000368979 TMEM63CQ9P1W3 806 aa27.31■■□□□ 1.96
SNX3-203ENST00000368979 MRPL12P52815 198 aaKnown RBP27.3■■□□□ 1.96
SNX3-203ENST00000368979 TRAF1Q13077 416 aa27.3■■□□□ 1.96
SNX3-203ENST00000368979 MOB2Q70IA6 237 aa27.3■■□□□ 1.96
SNX3-203ENST00000368979 PRPF38AQ8NAV1 312 aaKnown RBP27.3■■□□□ 1.96
SNX3-203ENST00000368979 TANGO6Q9C0B7 1094 aa27.3■■□□□ 1.96
SNX3-203ENST00000368979 GZF1Q9H116 711 aaPredicted RBP27.3■■□□□ 1.96
SNX3-203ENST00000368979 PSTPIP2Q9H939 334 aa27.3■■□□□ 1.96
SNX3-203ENST00000368979 BIN2Q9UBW5 565 aaPredicted RBP27.3■■□□□ 1.96
SNX3-203ENST00000368979 A0A1W2PQ27 194 aa27.29■■□□□ 1.96
SNX3-203ENST00000368979 A0A1W2PQ64 194 aa27.29■■□□□ 1.96
SNX3-203ENST00000368979 A0A1W2PQD8 194 aa27.29■■□□□ 1.96
SNX3-203ENST00000368979 BMP15O95972 392 aa27.29■■□□□ 1.96
SNX3-203ENST00000368979 PTPRFP10586 1907 aa27.29■■□□□ 1.96
SNX3-203ENST00000368979 NONOQ15233 471 aaKnown RBP eCLIP27.29■■□□□ 1.96
SNX3-203ENST00000368979 AXDND1Q5T1B0 1012 aaPredicted RBP27.29■■□□□ 1.96
SNX3-203ENST00000368979 LDHDQ86WU2 507 aa27.29■■□□□ 1.96
SNX3-203ENST00000368979 RBM46Q8TBY0 533 aaKnown RBP27.29■■□□□ 1.96
SNX3-203ENST00000368979 TMEM260Q9NX78 707 aa27.29■■□□□ 1.96
SNX3-203ENST00000368979 LIG1P18858 919 aa27.28■■□□□ 1.96
SNX3-203ENST00000368979 MARCKSP29966 332 aaPredicted RBP27.28■■□□□ 1.96
SNX3-203ENST00000368979 TTLL12Q14166 644 aaPredicted RBP27.28■■□□□ 1.96
SNX3-203ENST00000368979 USH1GQ495M9 461 aa27.28■■□□□ 1.96
SNX3-203ENST00000368979 JAKMIP3Q5VZ66 844 aa27.28■■□□□ 1.96
SNX3-203ENST00000368979 ARMC9Q7Z3E5 817 aa27.28■■□□□ 1.96
SNX3-203ENST00000368979 PPP1R9AQ9ULJ8 1098 aa27.28■■□□□ 1.96
SNX3-203ENST00000368979 PPATQ06203 517 aa27.27■■□□□ 1.96
SNX3-203ENST00000368979 INF2Q27J81 1249 aa27.27■■□□□ 1.96
SNX3-203ENST00000368979 CNKSR2Q8WXI2 1034 aa27.27■■□□□ 1.96
SNX3-203ENST00000368979 CLMNQ96JQ2 1002 aa27.27■■□□□ 1.96
SNX3-203ENST00000368979 ELP3Q9H9T3 547 aa27.27■■□□□ 1.96
SNX3-203ENST00000368979 LOC285556D6RIA3 1793 aa27.27■■□□□ 1.96
SNX3-203ENST00000368979 SPDYE5A6NIY4 337 aa27.26■■□□□ 1.96
SNX3-203ENST00000368979 FLOT1O75955 427 aa27.26■■□□□ 1.96
SNX3-203ENST00000368979 UBE2SQ16763 222 aa27.26■■□□□ 1.96
SNX3-203ENST00000368979 CCDC174Q6PII3 467 aa27.26■■□□□ 1.96
SNX3-203ENST00000368979 ERO1BQ86YB8 467 aa27.26■■□□□ 1.96
SNX3-203ENST00000368979 CCAR1Q8IX12 1150 aaKnown RBP27.26■■□□□ 1.96
SNX3-203ENST00000368979 ZNF784Q8NCA9 323 aaPredicted RBP27.26■■□□□ 1.96
SNX3-203ENST00000368979 SYAP1Q96A49 352 aaPredicted RBP27.26■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms