RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 TMEM266Q2M3C6 531 aa11.51□□□□□ -0.57
TPM3-209ENST00000368527 TSR1Q2NL82 804 aaKnown RBP11.51□□□□□ -0.57
TPM3-209ENST00000368527 MFSD14BQ5SR56 506 aa11.51□□□□□ -0.57
TPM3-209ENST00000368527 JAKMIP3Q5VZ66 844 aa11.51□□□□□ -0.57
TPM3-209ENST00000368527 NEK8Q86SG6 692 aa11.51□□□□□ -0.57
TPM3-209ENST00000368527 TRMT44Q8IYL2 757 aaKnown RBP11.51□□□□□ -0.57
TPM3-209ENST00000368527 ADSSL1Q8N142 457 aa11.51□□□□□ -0.57
TPM3-209ENST00000368527 REXO1Q8N1G1 1221 aaKnown RBP11.51□□□□□ -0.57
TPM3-209ENST00000368527 RETREG2Q8NC44 543 aa11.51□□□□□ -0.57
TPM3-209ENST00000368527 DYNLL2Q96FJ2 89 aa11.51□□□□□ -0.57
TPM3-209ENST00000368527 CALML4Q96GE6 196 aa11.51□□□□□ -0.57
TPM3-209ENST00000368527 CCDC17Q96LX7 622 aa11.51□□□□□ -0.57
TPM3-209ENST00000368527 NUP58Q9BVL2 599 aa11.51□□□□□ -0.57
TPM3-209ENST00000368527 MRIQ9BWK5 157 aa11.51□□□□□ -0.57
TPM3-209ENST00000368527 RIOX1Q9H6W3 641 aa11.51□□□□□ -0.57
TPM3-209ENST00000368527 KBTBD4Q9NVX7 518 aa11.51□□□□□ -0.57
TPM3-209ENST00000368527 STK17AQ9UEE5 414 aa11.51□□□□□ -0.57
TPM3-209ENST00000368527 ATP6V0A2Q9Y487 856 aa11.51□□□□□ -0.57
TPM3-209ENST00000368527 SNED1Q8TER0 1413 aa11.51□□□□□ -0.57
TPM3-209ENST00000368527 USP17L3A6NCW0 530 aa11.5□□□□□ -0.57
TPM3-209ENST00000368527 USP17L4A6NCW7 530 aa11.5□□□□□ -0.57
TPM3-209ENST00000368527 SMCO2A6NFE2 343 aa11.5□□□□□ -0.57
TPM3-209ENST00000368527 POTEB2H3BUK9 544 aa11.5□□□□□ -0.57
TPM3-209ENST00000368527 PPEF1O14829 653 aaPredicted RBP11.5□□□□□ -0.57
TPM3-209ENST00000368527 N4BP3O15049 544 aa11.5□□□□□ -0.57
TPM3-209ENST00000368527 KIF5CO60282 957 aa11.5□□□□□ -0.57
TPM3-209ENST00000368527 NPR1P16066 1061 aa11.5□□□□□ -0.57
TPM3-209ENST00000368527 GCFC2P16383 781 aaKnown RBP11.5□□□□□ -0.57
TPM3-209ENST00000368527 COPB1P53618 953 aaKnown RBP11.5□□□□□ -0.57
TPM3-209ENST00000368527 RHBDL3P58872 404 aa11.5□□□□□ -0.57
TPM3-209ENST00000368527 FKBP1AP62942 108 aaKnown RBP11.5□□□□□ -0.57
TPM3-209ENST00000368527 PDIA5Q14554 519 aa11.5□□□□□ -0.57
TPM3-209ENST00000368527 SEPT2Q15019 361 aa11.5□□□□□ -0.57
TPM3-209ENST00000368527 TCP11X2Q5H9J9 407 aa11.5□□□□□ -0.57
TPM3-209ENST00000368527 GPATCH4Q5T3I0 446 aaKnown RBP11.5□□□□□ -0.57
TPM3-209ENST00000368527 KLHL10Q6JEL2 608 aa11.5□□□□□ -0.57
TPM3-209ENST00000368527 TRIM65Q6PJ69 517 aa11.5□□□□□ -0.57
TPM3-209ENST00000368527 CYP26C1Q6V0L0 522 aa11.5□□□□□ -0.57
TPM3-209ENST00000368527 USP17L1Q7RTZ2 530 aa11.5□□□□□ -0.57
TPM3-209ENST00000368527 SEPT12Q8IYM1 358 aa11.5□□□□□ -0.57
TPM3-209ENST00000368527 NLGN1Q8N2Q7 840 aa11.5□□□□□ -0.57
TPM3-209ENST00000368527 STAG2Q8N3U4 1231 aa11.5□□□□□ -0.57
TPM3-209ENST00000368527 GIMAP8Q8ND71 665 aaPredicted RBP11.5□□□□□ -0.57
TPM3-209ENST00000368527 NELFBQ8WX92 580 aa11.5□□□□□ -0.57
TPM3-209ENST00000368527 UBXN4Q92575 508 aa11.5□□□□□ -0.57
TPM3-209ENST00000368527 MED15Q96RN5 788 aa11.5□□□□□ -0.57
TPM3-209ENST00000368527 C7orf25Q9BPX7 421 aa11.5□□□□□ -0.57
TPM3-209ENST00000368527 EHD4Q9H223 541 aa11.5□□□□□ -0.57
TPM3-209ENST00000368527 CTNND2Q9UQB3 1225 aa11.5□□□□□ -0.57
TPM3-209ENST00000368527 STK24Q9Y6E0 443 aa11.5□□□□□ -0.57
TPM3-209ENST00000368527 ABCB11O95342 1321 aa11.5□□□□□ -0.57
TPM3-209ENST00000368527 UBR3Q6ZT12 1888 aa11.5□□□□□ -0.57
TPM3-209ENST00000368527 KCNJ18B7U540 433 aa11.49□□□□□ -0.57
TPM3-209ENST00000368527 C6orf229H3BNL8 230 aa11.49□□□□□ -0.57
TPM3-209ENST00000368527 HLA-DOAP06340 250 aa11.49□□□□□ -0.57
TPM3-209ENST00000368527 SNHG28P0DPA3 235 aa11.49□□□□□ -0.57
TPM3-209ENST00000368527 CD44P16070 742 aaKnown RBP11.49□□□□□ -0.57
TPM3-209ENST00000368527 DNM2P50570 870 aa11.49□□□□□ -0.57
TPM3-209ENST00000368527 FXR2P51116 673 aaKnown RBP eCLIP11.49□□□□□ -0.575e-7■■■□□ 17.1
TPM3-209ENST00000368527 HDLBPQ00341 1268 aaKnown RBP11.49□□□□□ -0.57
TPM3-209ENST00000368527 KCNJ12Q14500 433 aa11.49□□□□□ -0.57
TPM3-209ENST00000368527 KRT31Q15323 416 aa11.49□□□□□ -0.57
TPM3-209ENST00000368527 IL17AQ16552 155 aa11.49□□□□□ -0.57
TPM3-209ENST00000368527 CNNM4Q6P4Q7 775 aa11.49□□□□□ -0.57
TPM3-209ENST00000368527 HHIPL2Q6UWX4 724 aa11.49□□□□□ -0.57
TPM3-209ENST00000368527 RASGRP2Q7LDG7 609 aa11.49□□□□□ -0.57
TPM3-209ENST00000368527 PTF1AQ7RTS3 328 aa11.49□□□□□ -0.57
TPM3-209ENST00000368527 CABP7Q86V35 215 aa11.49□□□□□ -0.57
TPM3-209ENST00000368527 GPKOWQ92917 476 aaPredicted RBP eCLIP11.49□□□□□ -0.57
TPM3-209ENST00000368527 MTMR4Q9NYA4 1195 aa11.49□□□□□ -0.57
TPM3-209ENST00000368527 AFF2P51816 1311 aa11.49□□□□□ -0.57
TPM3-209ENST00000368527 QSER1Q2KHR3 1735 aa11.49□□□□□ -0.57
TPM3-209ENST00000368527 IGKV6D-41A0A0C4DH26 115 aa11.48□□□□□ -0.57
TPM3-209ENST00000368527 PVALEFA0A1B0GWK0 134 aa11.48□□□□□ -0.57
TPM3-209ENST00000368527 LGALS16A8MUM7 142 aa11.48□□□□□ -0.57
TPM3-209ENST00000368527 POLRMTO00411 1230 aaKnown RBP11.48□□□□□ -0.57
TPM3-209ENST00000368527 CYTH3O43739 400 aa11.48□□□□□ -0.57
TPM3-209ENST00000368527 TTLL1O95922 423 aa11.48□□□□□ -0.57
TPM3-209ENST00000368527 PDE6BP35913 854 aa11.48□□□□□ -0.57
TPM3-209ENST00000368527 ADCY7P51828 1080 aa11.48□□□□□ -0.57
TPM3-209ENST00000368527 MRPL12P52815 198 aaKnown RBP11.48□□□□□ -0.57
TPM3-209ENST00000368527 GNG11P61952 73 aa11.48□□□□□ -0.57
TPM3-209ENST00000368527 MAP3K9P80192 1104 aa11.48□□□□□ -0.57
TPM3-209ENST00000368527 GABPAQ06546 454 aa11.48□□□□□ -0.57
TPM3-209ENST00000368527 PSMD2Q13200 908 aa11.48□□□□□ -0.57
TPM3-209ENST00000368527 BMS1Q14692 1282 aaKnown RBP11.48□□□□□ -0.57
TPM3-209ENST00000368527 INF2Q27J81 1249 aa11.48□□□□□ -0.57
TPM3-209ENST00000368527 ZNF662Q6ZS27 426 aa11.48□□□□□ -0.57
TPM3-209ENST00000368527 ARHGAP27Q6ZUM4 889 aa11.48□□□□□ -0.57
TPM3-209ENST00000368527 GPR161Q8N6U8 529 aaKnown RBP11.48□□□□□ -0.57
TPM3-209ENST00000368527 CEP112Q8N8E3 955 aa11.48□□□□□ -0.57
TPM3-209ENST00000368527 EHBP1Q8NDI1 1231 aa11.48□□□□□ -0.57
TPM3-209ENST00000368527 ZC3H12CQ9C0D7 883 aaKnown RBP11.48□□□□□ -0.57
TPM3-209ENST00000368527 DHX36Q9H2U1 1008 aaKnown RBP11.48□□□□□ -0.57
TPM3-209ENST00000368527 EXOC1Q9NV70 894 aa11.48□□□□□ -0.57
TPM3-209ENST00000368527 ZNHIT6Q9NWK9 470 aaKnown RBP11.48□□□□□ -0.57
TPM3-209ENST00000368527 SAP30BPQ9UHR5 308 aaKnown RBP11.48□□□□□ -0.57
TPM3-209ENST00000368527 DDX41Q9UJV9 622 aaKnown RBP11.48□□□□□ -0.57
TPM3-209ENST00000368527 FOCADQ5VW36 1801 aa11.47□□□□□ -0.57
TPM3-209ENST00000368527 LTBP1Q14766 1721 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms