RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 CCDC88AQ3V6T2 1871 aa16.07■□□□□ 0.16
CD48-201ENST00000368045 SEC31AO94979 1220 aaKnown RBP16.06■□□□□ 0.16
CD48-201ENST00000368045 ARHGAP25P42331 645 aa16.06■□□□□ 0.16
CD48-201ENST00000368045 TYW1BQ6NUM6 668 aa16.06■□□□□ 0.16
CD48-201ENST00000368045 ZNF662Q6ZS27 426 aa16.06■□□□□ 0.16
CD48-201ENST00000368045 HEATR3Q7Z4Q2 680 aa16.06■□□□□ 0.16
CD48-201ENST00000368045 TXNRD3Q86VQ6 643 aa16.06■□□□□ 0.16
CD48-201ENST00000368045 SLC35F6Q8N357 371 aa16.06■□□□□ 0.16
CD48-201ENST00000368045 ACRBPQ8NEB7 543 aa16.06■□□□□ 0.16
CD48-201ENST00000368045 SRP68Q9UHB9 627 aaKnown RBP16.06■□□□□ 0.16
CD48-201ENST00000368045 RAB21Q9UL25 225 aa16.06■□□□□ 0.16
CD48-201ENST00000368045 DNM2P50570 870 aa16.05■□□□□ 0.16
CD48-201ENST00000368045 GRAPQ13588 217 aa16.05■□□□□ 0.16
CD48-201ENST00000368045 TSR1Q2NL82 804 aaKnown RBP16.05■□□□□ 0.16
CD48-201ENST00000368045 ZNF804AQ7Z570 1209 aa16.05■□□□□ 0.16
CD48-201ENST00000368045 RETREG2Q8NC44 543 aa16.05■□□□□ 0.16
CD48-201ENST00000368045 GRAPLQ8TC17 118 aaPredicted RBP16.05■□□□□ 0.16
CD48-201ENST00000368045 ZNF507Q8TCN5 953 aa16.05■□□□□ 0.16
CD48-201ENST00000368045 ZMYND12Q9H0C1 365 aa16.05■□□□□ 0.16
CD48-201ENST00000368045 TMEM60Q9H2L4 133 aa16.05■□□□□ 0.16
CD48-201ENST00000368045 ST7Q9NRC1 585 aa16.05■□□□□ 0.16
CD48-201ENST00000368045 CAPN11Q9UMQ6 739 aa16.05■□□□□ 0.16
CD48-201ENST00000368045 LUC7L2Q9Y383 392 aaKnown RBP16.05■□□□□ 0.16
CD48-201ENST00000368045 BICDL2A1A5D9 508 aa16.05■□□□□ 0.16
CD48-201ENST00000368045 ERLIN1O75477 346 aa16.05■□□□□ 0.16
CD48-201ENST00000368045 HOXA7P31268 230 aaPredicted RBP16.05■□□□□ 0.16
CD48-201ENST00000368045 INF2Q27J81 1249 aa16.05■□□□□ 0.16
CD48-201ENST00000368045 SLC35G1Q2M3R5 365 aa16.05■□□□□ 0.16
CD48-201ENST00000368045 COBLL1Q53SF7 1204 aa16.05■□□□□ 0.16
CD48-201ENST00000368045 TTI2Q6NXR4 508 aa16.05■□□□□ 0.16
CD48-201ENST00000368045 FAM114A1Q8IWE2 563 aa16.05■□□□□ 0.16
CD48-201ENST00000368045 RASGRP4Q8TDF6 673 aa16.05■□□□□ 0.16
CD48-201ENST00000368045 IQCDQ96DY2 449 aa16.05■□□□□ 0.16
CD48-201ENST00000368045 DYNLL2Q96FJ2 89 aa16.05■□□□□ 0.16
CD48-201ENST00000368045 TRIM47Q96LD4 638 aa16.05■□□□□ 0.16
CD48-201ENST00000368045 TMEM47Q9BQJ4 181 aa16.05■□□□□ 0.16
CD48-201ENST00000368045 NUP58Q9BVL2 599 aa16.05■□□□□ 0.16
CD48-201ENST00000368045 FUT8Q9BYC5 575 aa16.05■□□□□ 0.16
CD48-201ENST00000368045 EPN1Q9Y6I3 576 aaPredicted RBP16.05■□□□□ 0.16
CD48-201ENST00000368045 USP17L3A6NCW0 530 aa16.04■□□□□ 0.16
CD48-201ENST00000368045 USP17L4A6NCW7 530 aa16.04■□□□□ 0.16
CD48-201ENST00000368045 CYTH3O43739 400 aa16.04■□□□□ 0.16
CD48-201ENST00000368045 COBLO75128 1261 aa16.04■□□□□ 0.16
CD48-201ENST00000368045 SASH3O75995 380 aa16.04■□□□□ 0.16
CD48-201ENST00000368045 NDUFA10O95299 355 aa16.04■□□□□ 0.16
CD48-201ENST00000368045 OR52Z1P0C646 297 aa16.04■□□□□ 0.16
CD48-201ENST00000368045 RASA1P20936 1047 aa16.04■□□□□ 0.16
CD48-201ENST00000368045 GNA11P29992 359 aa16.04■□□□□ 0.16
CD48-201ENST00000368045 CYP2C19P33261 490 aa16.04■□□□□ 0.16
CD48-201ENST00000368045 NONOQ15233 471 aaKnown RBP eCLIP16.04■□□□□ 0.16
CD48-201ENST00000368045 LONRF2Q1L5Z9 754 aa16.04■□□□□ 0.16
CD48-201ENST00000368045 USP17L1Q7RTZ2 530 aa16.04■□□□□ 0.16
CD48-201ENST00000368045 C7orf25Q9BPX7 421 aa16.04■□□□□ 0.16
CD48-201ENST00000368045 GBP3Q9H0R5 595 aa16.04■□□□□ 0.16
CD48-201ENST00000368045 EPC1Q9H2F5 836 aa16.04■□□□□ 0.16
CD48-201ENST00000368045 DNAJC5Q9H3Z4 198 aa16.04■□□□□ 0.16
CD48-201ENST00000368045 HAUS4Q9H6D7 363 aa16.04■□□□□ 0.16
CD48-201ENST00000368045 C6orf50Q9HD87 102 aa16.04■□□□□ 0.16
CD48-201ENST00000368045 RTCBQ9Y3I0 505 aaKnown RBP16.04■□□□□ 0.16
CD48-201ENST00000368045 CTAGE15A4D2H0 777 aa16.03■□□□□ 0.16
CD48-201ENST00000368045 hCG_1984214I3L0E3 225 aa16.03■□□□□ 0.16
CD48-201ENST00000368045 RNF225M0QZC1 329 aaPredicted RBP16.03■□□□□ 0.16
CD48-201ENST00000368045 GNPATO15228 680 aa16.03■□□□□ 0.16
CD48-201ENST00000368045 CTAGE8P0CG41 777 aa16.03■□□□□ 0.16
CD48-201ENST00000368045 SRGNP10124 158 aa16.03■□□□□ 0.16
CD48-201ENST00000368045 CDC25AP30304 524 aa16.03■□□□□ 0.16
CD48-201ENST00000368045 AMPD3Q01432 767 aa16.03■□□□□ 0.16
CD48-201ENST00000368045 SMC1AQ14683 1233 aaKnown RBP16.03■□□□□ 0.16
CD48-201ENST00000368045 MEA1Q16626 185 aa16.03■□□□□ 0.16
CD48-201ENST00000368045 C16orf86Q6ZW13 317 aa16.03■□□□□ 0.16
CD48-201ENST00000368045 CTAGE6Q86UF2 777 aa16.03■□□□□ 0.16
CD48-201ENST00000368045 CABP7Q86V35 215 aa16.03■□□□□ 0.16
CD48-201ENST00000368045 CTAGE4Q8IX94 777 aa16.03■□□□□ 0.16
CD48-201ENST00000368045 ZNF713Q8N859 430 aaPredicted RBP16.03■□□□□ 0.16
CD48-201ENST00000368045 EHBP1Q8NDI1 1231 aa16.03■□□□□ 0.16
CD48-201ENST00000368045 NEDD1Q8NHV4 660 aa16.03■□□□□ 0.16
CD48-201ENST00000368045 ANKZF1Q9H8Y5 726 aa16.03■□□□□ 0.16
CD48-201ENST00000368045 ANKIB1Q9P2G1 1089 aa16.03■□□□□ 0.16
CD48-201ENST00000368045 FLT1P17948 1338 aa16.03■□□□□ 0.16
CD48-201ENST00000368045 A0A0U1RQJ8 604 aa16.03■□□□□ 0.16
CD48-201ENST00000368045 TTC26A0AVF1 554 aa16.03■□□□□ 0.16
CD48-201ENST00000368045 ESYT2A0FGR8 921 aa16.03■□□□□ 0.16
CD48-201ENST00000368045 KLRF2D3W0D1 207 aa16.03■□□□□ 0.16
CD48-201ENST00000368045 MAP2K7O14733 419 aa16.03■□□□□ 0.16
CD48-201ENST00000368045 PLCG2P16885 1265 aa16.03■□□□□ 0.16
CD48-201ENST00000368045 CCNE1P24864 410 aa16.03■□□□□ 0.16
CD48-201ENST00000368045 KRT83P78385 493 aa16.03■□□□□ 0.16
CD48-201ENST00000368045 TGFBRAP1Q8WUH2 860 aa16.03■□□□□ 0.16
CD48-201ENST00000368045 ATRIPQ8WXE1 791 aa16.03■□□□□ 0.16
CD48-201ENST00000368045 SLF1Q9BQI6 1058 aa16.03■□□□□ 0.16
CD48-201ENST00000368045 MAPK8IP1Q9UQF2 711 aa16.03■□□□□ 0.16
CD48-201ENST00000368045 NUTM2BA6NNL0 878 aaPredicted RBP16.02■□□□□ 0.15
CD48-201ENST00000368045 PP2D1A8MPX8 630 aa16.02■□□□□ 0.15
CD48-201ENST00000368045 NUTM2EB1AL46 878 aaPredicted RBP16.02■□□□□ 0.15
CD48-201ENST00000368045 PSMD14O00487 310 aa16.02■□□□□ 0.15
CD48-201ENST00000368045 NAPAP54920 295 aa16.02■□□□□ 0.15
CD48-201ENST00000368045 AMPD2Q01433 879 aa16.02■□□□□ 0.15
CD48-201ENST00000368045 GPS2Q13227 327 aa16.02■□□□□ 0.15
CD48-201ENST00000368045 VPS72Q15906 364 aa16.02■□□□□ 0.15
CD48-201ENST00000368045 P2RX5Q93086 422 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms