RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 ITIH6Q6UXX5 1313 aa13.84□□□□□ -0.19
PTPN7-202ENST00000367279 ZPR1O75312 459 aa13.84□□□□□ -0.19
PTPN7-202ENST00000367279 VSNL1P62760 191 aa13.84□□□□□ -0.19
PTPN7-202ENST00000367279 HDXQ7Z353 690 aa13.84□□□□□ -0.19
PTPN7-202ENST00000367279 CCDC148Q8NFR7 591 aa13.84□□□□□ -0.19
PTPN7-202ENST00000367279 HPS3Q969F9 1004 aa13.84□□□□□ -0.19
PTPN7-202ENST00000367279 TCP11L1Q9NUJ3 509 aa13.84□□□□□ -0.19
PTPN7-202ENST00000367279 ZNHIT6Q9NWK9 470 aaKnown RBP13.84□□□□□ -0.19
PTPN7-202ENST00000367279 TRIM14Q14142 442 aa13.84□□□□□ -0.19
PTPN7-202ENST00000367279 CCDC47Q96A33 483 aaKnown RBP13.84□□□□□ -0.19
PTPN7-202ENST00000367279 DRC1Q96MC2 740 aa13.84□□□□□ -0.19
PTPN7-202ENST00000367279 PCDHA6Q9UN73 950 aa13.84□□□□□ -0.19
PTPN7-202ENST00000367279 PCDHA8Q9Y5H6 950 aa13.84□□□□□ -0.19
PTPN7-202ENST00000367279 MACROD2A1Z1Q3 448 aa13.83□□□□□ -0.2
PTPN7-202ENST00000367279 N4BP1O75113 896 aaKnown RBP13.83□□□□□ -0.2
PTPN7-202ENST00000367279 ARHGAP25P42331 645 aa13.83□□□□□ -0.2
PTPN7-202ENST00000367279 PIP4K2BP78356 416 aa13.83□□□□□ -0.2
PTPN7-202ENST00000367279 TBC1D8BQ0IIM8 1120 aa13.83□□□□□ -0.2
PTPN7-202ENST00000367279 HSP90B2PQ58FF3 399 aa13.83□□□□□ -0.2
PTPN7-202ENST00000367279 ARL6IP4Q66PJ3 421 aaKnown RBP13.83□□□□□ -0.2
PTPN7-202ENST00000367279 ADSSL1Q8N142 457 aa13.83□□□□□ -0.2
PTPN7-202ENST00000367279 EXOC1Q9NV70 894 aa13.83□□□□□ -0.2
PTPN7-202ENST00000367279 ZMYND10O75800 440 aa13.83□□□□□ -0.2
PTPN7-202ENST00000367279 PLCG1P19174 1290 aa13.83□□□□□ -0.2
PTPN7-202ENST00000367279 TECP42680 631 aa13.83□□□□□ -0.2
PTPN7-202ENST00000367279 CABP7Q86V35 215 aa13.83□□□□□ -0.2
PTPN7-202ENST00000367279 SMARCC1Q92922 1105 aaPredicted RBP13.83□□□□□ -0.2
PTPN7-202ENST00000367279 POTEB2H3BUK9 544 aa13.82□□□□□ -0.2
PTPN7-202ENST00000367279 GNPATO15228 680 aa13.82□□□□□ -0.2
PTPN7-202ENST00000367279 EIF3JO75822 258 aaKnown RBP13.82□□□□□ -0.2
PTPN7-202ENST00000367279 FGRP09769 529 aa13.82□□□□□ -0.2
PTPN7-202ENST00000367279 CYP27A1Q02318 531 aa13.82□□□□□ -0.2
PTPN7-202ENST00000367279 SKIDA1Q1XH10 827 aa13.82□□□□□ -0.2
PTPN7-202ENST00000367279 CLEC4GQ6UXB4 293 aa13.82□□□□□ -0.2
PTPN7-202ENST00000367279 TUBGCP2Q9BSJ2 902 aa13.82□□□□□ -0.2
PTPN7-202ENST00000367279 ANKRD2Q9GZV1 360 aa13.82□□□□□ -0.2
PTPN7-202ENST00000367279 AGPAT5Q9NUQ2 364 aa13.82□□□□□ -0.2
PTPN7-202ENST00000367279 PLCH1Q4KWH8 1693 aa13.82□□□□□ -0.2
PTPN7-202ENST00000367279 SPATA31A1Q5TZJ5 1347 aa13.82□□□□□ -0.2
PTPN7-202ENST00000367279 CACNA1SQ13698 1873 aa13.82□□□□□ -0.2
PTPN7-202ENST00000367279 KLRF2D3W0D1 207 aa13.82□□□□□ -0.2
PTPN7-202ENST00000367279 FAM98CQ17RN3 349 aaKnown RBP13.82□□□□□ -0.2
PTPN7-202ENST00000367279 NAALADL2Q58DX5 795 aa13.82□□□□□ -0.2
PTPN7-202ENST00000367279 SOGA3Q5TF21 947 aa13.82□□□□□ -0.2
PTPN7-202ENST00000367279 IRF2BP1Q8IU81 584 aa13.82□□□□□ -0.2
PTPN7-202ENST00000367279 TXLNBQ8N3L3 684 aa13.82□□□□□ -0.2
PTPN7-202ENST00000367279 UIMC1Q96RL1 719 aa13.82□□□□□ -0.2
PTPN7-202ENST00000367279 ADAM21Q9UKJ8 722 aa13.82□□□□□ -0.2
PTPN7-202ENST00000367279 A0A0U1RQG5 324 aaPredicted RBP13.82□□□□□ -0.2
PTPN7-202ENST00000367279 FAM193AP78312 1265 aa13.82□□□□□ -0.2
PTPN7-202ENST00000367279 WHAMMP3Q1A5X7 153 aa13.82□□□□□ -0.2
PTPN7-202ENST00000367279 FAM182BQ5T319 152 aa13.82□□□□□ -0.2
PTPN7-202ENST00000367279 SPTY2D1Q68D10 685 aaPredicted RBP13.82□□□□□ -0.2
PTPN7-202ENST00000367279 C4orf32Q8N8J7 132 aa13.82□□□□□ -0.2
PTPN7-202ENST00000367279 JAKMIP2Q96AA8 810 aa13.82□□□□□ -0.2
PTPN7-202ENST00000367279 JADE2Q9NQC1 790 aa13.82□□□□□ -0.2
PTPN7-202ENST00000367279 BCL9LQ86UU0 1499 aa13.81□□□□□ -0.2
PTPN7-202ENST00000367279 LGALS16A8MUM7 142 aa13.81□□□□□ -0.2
PTPN7-202ENST00000367279 FCER1AP12319 257 aa13.81□□□□□ -0.2
PTPN7-202ENST00000367279 TXKP42681 527 aa13.81□□□□□ -0.2
PTPN7-202ENST00000367279 BEND6Q5SZJ8 279 aaPredicted RBP13.81□□□□□ -0.2
PTPN7-202ENST00000367279 C12orf60Q5U649 245 aa13.81□□□□□ -0.2
PTPN7-202ENST00000367279 USP17L2Q6R6M4 530 aa13.81□□□□□ -0.2
PTPN7-202ENST00000367279 PTF1AQ7RTS3 328 aa13.81□□□□□ -0.2
PTPN7-202ENST00000367279 NOC4LQ9BVI4 516 aaKnown RBP13.81□□□□□ -0.2
PTPN7-202ENST00000367279 CDCA7Q9BWT1 371 aaPredicted RBP13.81□□□□□ -0.2
PTPN7-202ENST00000367279 BIN2Q9UBW5 565 aaPredicted RBP13.81□□□□□ -0.2
PTPN7-202ENST00000367279 MAD2L2Q9UI95 211 aa13.81□□□□□ -0.2
PTPN7-202ENST00000367279 LRRC10BA6NIK2 292 aa13.81□□□□□ -0.2
PTPN7-202ENST00000367279 CYTH3O43739 400 aa13.81□□□□□ -0.2
PTPN7-202ENST00000367279 ATP1A1P05023 1023 aaKnown RBP13.81□□□□□ -0.2
PTPN7-202ENST00000367279 GNAQP50148 359 aa13.81□□□□□ -0.2
PTPN7-202ENST00000367279 GRIK5Q16478 980 aa13.81□□□□□ -0.2
PTPN7-202ENST00000367279 TXNRD1Q16881 649 aa13.81□□□□□ -0.2
PTPN7-202ENST00000367279 TPTE2Q6XPS3 522 aa13.81□□□□□ -0.2
PTPN7-202ENST00000367279 TMEM47Q9BQJ4 181 aa13.81□□□□□ -0.2
PTPN7-202ENST00000367279 UBA5Q9GZZ9 404 aa13.81□□□□□ -0.2
PTPN7-202ENST00000367279 SLC39A2Q9NP94 309 aa13.81□□□□□ -0.2
PTPN7-202ENST00000367279 REXO2Q9Y3B8 237 aaKnown RBP13.81□□□□□ -0.2
PTPN7-202ENST00000367279 SMCO2A6NFE2 343 aa13.81□□□□□ -0.2
PTPN7-202ENST00000367279 IDEP14735 1019 aa13.81□□□□□ -0.2
PTPN7-202ENST00000367279 DYMQ7RTS9 669 aa13.81□□□□□ -0.2
PTPN7-202ENST00000367279 CNOT6LQ96LI5 555 aaKnown RBP13.81□□□□□ -0.2
PTPN7-202ENST00000367279 FAN1Q9Y2M0 1017 aa13.81□□□□□ -0.2
PTPN7-202ENST00000367279 BAG3O95817 575 aa13.8□□□□□ -0.2
PTPN7-202ENST00000367279 GRM4Q14833 912 aa13.8□□□□□ -0.2
PTPN7-202ENST00000367279 DGKHQ86XP1 1220 aa13.8□□□□□ -0.2
PTPN7-202ENST00000367279 NYXQ9GZU5 481 aa13.8□□□□□ -0.2
PTPN7-202ENST00000367279 SEC63Q9UGP8 760 aaKnown RBP13.8□□□□□ -0.2
PTPN7-202ENST00000367279 EIF6P56537 245 aaKnown RBP13.8□□□□□ -0.2
PTPN7-202ENST00000367279 STK4Q13043 487 aa13.8□□□□□ -0.2
PTPN7-202ENST00000367279 MAPK8IP2Q13387 824 aaPredicted RBP13.8□□□□□ -0.2
PTPN7-202ENST00000367279 CASP8Q14790 479 aa13.8□□□□□ -0.2
PTPN7-202ENST00000367279 SBK1Q52WX2 424 aa13.8□□□□□ -0.2
PTPN7-202ENST00000367279 CDK5RAP3Q96JB5 506 aa13.8□□□□□ -0.2
PTPN7-202ENST00000367279 PSMB7Q99436 277 aa13.8□□□□□ -0.2
PTPN7-202ENST00000367279 STXBP3O00186 592 aa13.79□□□□□ -0.2
PTPN7-202ENST00000367279 RAD21O60216 631 aa13.79□□□□□ -0.2
PTPN7-202ENST00000367279 OR52Z1P0C646 297 aa13.79□□□□□ -0.2
PTPN7-202ENST00000367279 EEF1GP26641 437 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms