RNA–Protein interactions for RNA: ENST00000367256.9

SYNE1-208, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 10,742 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-208ENST00000367256 LMNB1P20700 586 aa7.99□□□□□ -1.13
SYNE1-208ENST00000367256 EPHB4P54760 987 aa7.99□□□□□ -1.13
SYNE1-208ENST00000367256 LMNB2Q03252 620 aa7.99□□□□□ -1.13
SYNE1-208ENST00000367256 CDC37L1Q7L3B6 337 aa7.99□□□□□ -1.13
SYNE1-208ENST00000367256 RAB44Q7Z6P3 723 aaPredicted RBP7.99□□□□□ -1.13
SYNE1-208ENST00000367256 HELBQ8NG08 1087 aaPredicted RBP7.99□□□□□ -1.13
SYNE1-208ENST00000367256 ZC3H15Q8WU90 426 aaKnown RBP7.99□□□□□ -1.13
SYNE1-208ENST00000367256 ARMT1Q9H993 441 aa7.99□□□□□ -1.13
SYNE1-208ENST00000367256 CDC23Q9UJX2 597 aa7.99□□□□□ -1.13
SYNE1-208ENST00000367256 ZBTB7BO15156 539 aaPredicted RBP7.98□□□□□ -1.13
SYNE1-208ENST00000367256 SLC1A4P43007 532 aa7.98□□□□□ -1.13
SYNE1-208ENST00000367256 TMTC3Q6ZXV5 915 aa7.98□□□□□ -1.13
SYNE1-208ENST00000367256 TRMT44Q8IYL2 757 aaKnown RBP7.98□□□□□ -1.13
SYNE1-208ENST00000367256 APPBP2Q92624 585 aa7.98□□□□□ -1.13
SYNE1-208ENST00000367256 CHMP6Q96FZ7 201 aa7.98□□□□□ -1.13
SYNE1-208ENST00000367256 TMEM63CQ9P1W3 806 aa7.98□□□□□ -1.13
SYNE1-208ENST00000367256 SNX14Q9Y5W7 946 aa7.98□□□□□ -1.13
SYNE1-208ENST00000367256 H7C1D1 291 aa7.98□□□□□ -1.13
SYNE1-208ENST00000367256 TSTA3Q13630 321 aaPredicted RBP7.98□□□□□ -1.13
SYNE1-208ENST00000367256 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.98□□□□□ -1.13
SYNE1-208ENST00000367256 PPP1R2P3Q6NXS1 205 aa7.98□□□□□ -1.13
SYNE1-208ENST00000367256 NELFCDQ8IXH7 590 aa7.98□□□□□ -1.13
SYNE1-208ENST00000367256 ZC4H2Q9NQZ6 224 aa7.98□□□□□ -1.13
SYNE1-208ENST00000367256 SRGAP2BP0DMP2 458 aa7.98□□□□□ -1.13
SYNE1-208ENST00000367256 DMP1Q13316 513 aaPredicted RBP7.98□□□□□ -1.13
SYNE1-208ENST00000367256 NONOQ15233 471 aaKnown RBP eCLIP7.98□□□□□ -1.13
SYNE1-208ENST00000367256 CAPN12Q6ZSI9 719 aa7.98□□□□□ -1.13
SYNE1-208ENST00000367256 METTL13Q8N6R0 699 aa7.98□□□□□ -1.13
SYNE1-208ENST00000367256 PDE11AQ9HCR9 933 aa7.98□□□□□ -1.13
SYNE1-208ENST00000367256 SYNMO15061 1565 aa7.98□□□□□ -1.13
SYNE1-208ENST00000367256 FAM102BQ5T8I3 360 aa7.98□□□□□ -1.13
SYNE1-208ENST00000367256 HACE1Q8IYU2 909 aa7.98□□□□□ -1.13
SYNE1-208ENST00000367256 DSCC1Q9BVC3 393 aa7.98□□□□□ -1.13
SYNE1-208ENST00000367256 ZC3H12CQ9C0D7 883 aaKnown RBP7.98□□□□□ -1.13
SYNE1-208ENST00000367256 V9GY48 417 aaPredicted RBP7.98□□□□□ -1.13
SYNE1-208ENST00000367256 POLD1P28340 1107 aa7.98□□□□□ -1.13
SYNE1-208ENST00000367256 PIK3CAP42336 1068 aa7.98□□□□□ -1.13
SYNE1-208ENST00000367256 PHKBQ93100 1093 aa7.98□□□□□ -1.13
SYNE1-208ENST00000367256 CENPKQ9BS16 269 aa7.98□□□□□ -1.13
SYNE1-208ENST00000367256 CLASP1Q7Z460 1538 aa7.98□□□□□ -1.13
SYNE1-208ENST00000367256 ABCA5Q8WWZ7 1642 aa7.98□□□□□ -1.13
SYNE1-208ENST00000367256 CMA1P23946 247 aa7.98□□□□□ -1.13
SYNE1-208ENST00000367256 ASPHQ12797 758 aa7.98□□□□□ -1.13
SYNE1-208ENST00000367256 GALNT17Q6IS24 598 aa7.98□□□□□ -1.13
SYNE1-208ENST00000367256 SEPT8Q92599 483 aa7.98□□□□□ -1.13
SYNE1-208ENST00000367256 ZNF274Q96GC6 653 aaPredicted RBP7.98□□□□□ -1.13
SYNE1-208ENST00000367256 CUEDC2Q9H467 287 aa7.98□□□□□ -1.13
SYNE1-208ENST00000367256 YTHDC2Q9H6S0 1430 aaKnown RBP7.98□□□□□ -1.13
SYNE1-208ENST00000367256 GAS7O60861 476 aa7.98□□□□□ -1.13
SYNE1-208ENST00000367256 IL9RQ01113 521 aa7.98□□□□□ -1.13
SYNE1-208ENST00000367256 ABTB1Q969K4 478 aaPredicted RBP7.98□□□□□ -1.13
SYNE1-208ENST00000367256 DYMQ7RTS9 669 aa7.97□□□□□ -1.13
SYNE1-208ENST00000367256 TPH2Q8IWU9 490 aa7.97□□□□□ -1.13
SYNE1-208ENST00000367256 FNBP4Q8N3X1 1017 aaPredicted RBP7.97□□□□□ -1.13
SYNE1-208ENST00000367256 RTCBQ9Y3I0 505 aaKnown RBP7.97□□□□□ -1.13
SYNE1-208ENST00000367256 HSPA6P17066 643 aa7.97□□□□□ -1.13
SYNE1-208ENST00000367256 UIMC1Q96RL1 719 aa7.97□□□□□ -1.13
SYNE1-208ENST00000367256 AATFQ9NY61 560 aaKnown RBP eCLIP7.97□□□□□ -1.13
SYNE1-208ENST00000367256 NSFL1CQ9UNZ2 370 aaKnown RBP7.97□□□□□ -1.13
SYNE1-208ENST00000367256 SOS2Q07890 1332 aaPredicted RBP7.97□□□□□ -1.13
SYNE1-208ENST00000367256 K7ENM7 598 aa7.97□□□□□ -1.13
SYNE1-208ENST00000367256 SKIP12755 728 aa7.97□□□□□ -1.13
SYNE1-208ENST00000367256 YWHAGP61981 247 aaKnown RBP eCLIP7.97□□□□□ -1.13
SYNE1-208ENST00000367256 TTC19Q6DKK2 380 aaPredicted RBP7.97□□□□□ -1.13
SYNE1-208ENST00000367256 C4orf50Q6ZRC1 276 aa7.97□□□□□ -1.13
SYNE1-208ENST00000367256 TEX2Q8IWB9 1127 aa7.97□□□□□ -1.13
SYNE1-208ENST00000367256 NRBF2Q96F24 287 aa7.97□□□□□ -1.13
SYNE1-208ENST00000367256 ESRRGP62508 458 aa7.97□□□□□ -1.13
SYNE1-208ENST00000367256 SPOUT1Q5T280 376 aaKnown RBP7.97□□□□□ -1.13
SYNE1-208ENST00000367256 RASIP1Q5U651 963 aa7.97□□□□□ -1.13
SYNE1-208ENST00000367256 HOOK2Q96ED9 719 aa7.97□□□□□ -1.13
SYNE1-208ENST00000367256 CSRNP1Q96S65 589 aa7.97□□□□□ -1.13
SYNE1-208ENST00000367256 PTPN22Q9Y2R2 807 aa7.97□□□□□ -1.13
SYNE1-208ENST00000367256 EDC4Q6P2E9 1401 aaKnown RBP7.97□□□□□ -1.13
SYNE1-208ENST00000367256 CAPN9O14815 690 aa7.97□□□□□ -1.13
SYNE1-208ENST00000367256 IL2RBP14784 551 aa7.97□□□□□ -1.13
SYNE1-208ENST00000367256 PDE6BP35913 854 aa7.97□□□□□ -1.13
SYNE1-208ENST00000367256 CTDSPL2Q05D32 466 aa7.97□□□□□ -1.13
SYNE1-208ENST00000367256 KBTBD3Q8NAB2 608 aa7.97□□□□□ -1.13
SYNE1-208ENST00000367256 FAM8A1Q9UBU6 413 aa7.97□□□□□ -1.13
SYNE1-208ENST00000367256 TEKT2Q9UIF3 430 aa7.97□□□□□ -1.13
SYNE1-208ENST00000367256 GNGT2O14610 69 aa7.97□□□□□ -1.13
SYNE1-208ENST00000367256 EEF1DP29692 281 aaKnown RBP7.97□□□□□ -1.13
SYNE1-208ENST00000367256 PRPSAP1Q14558 356 aa7.97□□□□□ -1.13
SYNE1-208ENST00000367256 PTPROQ16827 1216 aa7.97□□□□□ -1.13
SYNE1-208ENST00000367256 CDKL2Q92772 493 aa7.97□□□□□ -1.13
SYNE1-208ENST00000367256 MYL10Q9BUA6 226 aa7.97□□□□□ -1.13
SYNE1-208ENST00000367256 IKBKBO14920 756 aa7.97□□□□□ -1.13
SYNE1-208ENST00000367256 GNPATO15228 680 aa7.97□□□□□ -1.13
SYNE1-208ENST00000367256 BUB1O43683 1085 aa7.97□□□□□ -1.13
SYNE1-208ENST00000367256 HSPA8P11142 646 aaKnown RBP7.97□□□□□ -1.13
SYNE1-208ENST00000367256 MAD1L1Q9Y6D9 718 aa7.97□□□□□ -1.13
SYNE1-208ENST00000367256 H0YCG3 227 aa7.97□□□□□ -1.13
SYNE1-208ENST00000367256 GPAA1O43292 621 aa7.97□□□□□ -1.13
SYNE1-208ENST00000367256 STAT1P42224 750 aa7.97□□□□□ -1.13
SYNE1-208ENST00000367256 C10orf76Q5T2E6 689 aa7.97□□□□□ -1.13
SYNE1-208ENST00000367256 DIS3L2Q8IYB7 885 aaKnown RBP7.97□□□□□ -1.13
SYNE1-208ENST00000367256 PIP4K2CQ8TBX8 421 aa7.97□□□□□ -1.13
SYNE1-208ENST00000367256 ANLNQ9NQW6 1124 aa7.97□□□□□ -1.13
SYNE1-208ENST00000367256 A6NJR5 290 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms