RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 ABCB5Q2M3G0 1257 aa17.22■□□□□ 0.35
NUCKS1-201ENST00000367142 EXOC8Q8IYI6 725 aa17.22■□□□□ 0.35
NUCKS1-201ENST00000367142 HDAC11Q96DB2 347 aa17.22■□□□□ 0.35
NUCKS1-201ENST00000367142 ORAI2Q96SN7 254 aa17.22■□□□□ 0.35
NUCKS1-201ENST00000367142 LGR6Q9HBX8 967 aa17.22■□□□□ 0.35
NUCKS1-201ENST00000367142 SYNJ2BP-COX16A0A087WUM0 186 aa17.21■□□□□ 0.35
NUCKS1-201ENST00000367142 USP17L12C9JPN9 530 aa17.21■□□□□ 0.35
NUCKS1-201ENST00000367142 USP17L21D6R901 530 aa17.21■□□□□ 0.35
NUCKS1-201ENST00000367142 DLATP10515 647 aaKnown RBP17.21■□□□□ 0.35
NUCKS1-201ENST00000367142 PPFIA1Q13136 1202 aa17.21■□□□□ 0.35
NUCKS1-201ENST00000367142 NEK8Q86SG6 692 aa17.21■□□□□ 0.35
NUCKS1-201ENST00000367142 CCDC13Q8IYE1 715 aa17.21■□□□□ 0.35
NUCKS1-201ENST00000367142 COX16Q9P0S2 106 aa17.21■□□□□ 0.35
NUCKS1-201ENST00000367142 ANGPTL3Q9Y5C1 460 aa17.21■□□□□ 0.35
NUCKS1-201ENST00000367142 ATP8B3O60423 1300 aa17.21■□□□□ 0.35
NUCKS1-201ENST00000367142 ZBTB7BO15156 539 aaPredicted RBP17.21■□□□□ 0.35
NUCKS1-201ENST00000367142 RNF8O76064 485 aa17.21■□□□□ 0.35
NUCKS1-201ENST00000367142 STMN1P16949 149 aa17.21■□□□□ 0.35
NUCKS1-201ENST00000367142 MAP7D3Q8IWC1 876 aa17.21■□□□□ 0.35
NUCKS1-201ENST00000367142 ANKRD42Q8N9B4 389 aa17.21■□□□□ 0.35
NUCKS1-201ENST00000367142 CDKL2Q92772 493 aa17.21■□□□□ 0.35
NUCKS1-201ENST00000367142 PIK3C2GO75747 1445 aa17.21■□□□□ 0.35
NUCKS1-201ENST00000367142 TMEM232C9JQI7 657 aa17.21■□□□□ 0.35
NUCKS1-201ENST00000367142 SGSM2O43147 1006 aa17.21■□□□□ 0.35
NUCKS1-201ENST00000367142 ZNF75DP51815 510 aa17.21■□□□□ 0.35
NUCKS1-201ENST00000367142 SLFN13Q68D06 897 aa17.21■□□□□ 0.35
NUCKS1-201ENST00000367142 ARMC9Q7Z3E5 817 aa17.21■□□□□ 0.35
NUCKS1-201ENST00000367142 LARSQ9P2J5 1176 aaKnown RBP17.21■□□□□ 0.35
NUCKS1-201ENST00000367142 SERTAD1Q9UHV2 236 aa17.21■□□□□ 0.35
NUCKS1-201ENST00000367142 AKT3Q9Y243 479 aa17.21■□□□□ 0.35
NUCKS1-201ENST00000367142 RGS16O15492 202 aaPredicted RBP17.21■□□□□ 0.35
NUCKS1-201ENST00000367142 ZNF853P0CG23 659 aa17.21■□□□□ 0.35
NUCKS1-201ENST00000367142 ARHGAP4P98171 946 aa17.21■□□□□ 0.35
NUCKS1-201ENST00000367142 NLGN1Q8N2Q7 840 aa17.21■□□□□ 0.35
NUCKS1-201ENST00000367142 ARMCX3Q9UH62 379 aaPredicted RBP17.21■□□□□ 0.35
NUCKS1-201ENST00000367142 PPFIA4O75335 1185 aa17.21■□□□□ 0.34
NUCKS1-201ENST00000367142 RAB44Q7Z6P3 723 aaPredicted RBP17.21■□□□□ 0.34
NUCKS1-201ENST00000367142 ANKRD36BP1Q96IX9 119 aa17.21■□□□□ 0.34
NUCKS1-201ENST00000367142 METTL14Q9HCE5 456 aaKnown RBP17.21■□□□□ 0.34
NUCKS1-201ENST00000367142 IRAK4Q9NWZ3 460 aa17.21■□□□□ 0.34
NUCKS1-201ENST00000367142 SLC12A6Q9UHW9 1150 aa17.21■□□□□ 0.34
NUCKS1-201ENST00000367142 OR52Z1P0C646 297 aa17.2■□□□□ 0.34
NUCKS1-201ENST00000367142 ARHGAP25P42331 645 aa17.2■□□□□ 0.34
NUCKS1-201ENST00000367142 KRT71Q3SY84 523 aa17.2■□□□□ 0.34
NUCKS1-201ENST00000367142 BBOF1Q8ND07 529 aa17.2■□□□□ 0.34
NUCKS1-201ENST00000367142 FAM71BQ8TC56 605 aa17.2■□□□□ 0.34
NUCKS1-201ENST00000367142 CABS1Q96KC9 395 aa17.2■□□□□ 0.34
NUCKS1-201ENST00000367142 TYW1Q9NV66 732 aaKnown RBP17.2■□□□□ 0.34
NUCKS1-201ENST00000367142 SLAIN2Q9P270 581 aa17.2■□□□□ 0.34
NUCKS1-201ENST00000367142 DDAH1O94760 285 aa17.2■□□□□ 0.34
NUCKS1-201ENST00000367142 ZSCAN20P17040 1043 aaPredicted RBP17.2■□□□□ 0.34
NUCKS1-201ENST00000367142 INPP5BP32019 993 aa17.2■□□□□ 0.34
NUCKS1-201ENST00000367142 RNASELQ05823 741 aaKnown RBP17.2■□□□□ 0.34
NUCKS1-201ENST00000367142 ARHGEF37A1IGU5 675 aa17.2■□□□□ 0.34
NUCKS1-201ENST00000367142 C8orf34Q49A92 452 aa17.2■□□□□ 0.34
NUCKS1-201ENST00000367142 SDCCAG3Q96C92 435 aa17.2■□□□□ 0.34
NUCKS1-201ENST00000367142 IFT122Q9HBG6 1241 aa17.2■□□□□ 0.34
NUCKS1-201ENST00000367142 PARD3Q8TEW0 1356 aa17.2■□□□□ 0.34
NUCKS1-201ENST00000367142 A0A1B0GUA9 196 aa17.2■□□□□ 0.34
NUCKS1-201ENST00000367142 ECE1P42892 770 aa17.2■□□□□ 0.34
NUCKS1-201ENST00000367142 CARD6Q9BX69 1037 aa17.2■□□□□ 0.34
NUCKS1-201ENST00000367142 KCNJ18B7U540 433 aa17.2■□□□□ 0.34
NUCKS1-201ENST00000367142 PPEF1O14829 653 aaPredicted RBP17.2■□□□□ 0.34
NUCKS1-201ENST00000367142 FOSP01100 380 aaPredicted RBP17.2■□□□□ 0.34
NUCKS1-201ENST00000367142 BFSP1Q12934 665 aa17.2■□□□□ 0.34
NUCKS1-201ENST00000367142 MTX1Q13505 466 aa17.2■□□□□ 0.34
NUCKS1-201ENST00000367142 KCNJ12Q14500 433 aa17.2■□□□□ 0.34
NUCKS1-201ENST00000367142 RSRC2Q7L4I2 434 aaKnown RBP17.2■□□□□ 0.34
NUCKS1-201ENST00000367142 MGARPQ8TDB4 240 aa17.2■□□□□ 0.34
NUCKS1-201ENST00000367142 DACT3Q96B18 629 aaPredicted RBP17.2■□□□□ 0.34
NUCKS1-201ENST00000367142 SEPT9Q9UHD8 586 aaPredicted RBP17.19■□□□□ 0.34
NUCKS1-201ENST00000367142 SNX25Q9H3E2 840 aa17.19■□□□□ 0.34
NUCKS1-201ENST00000367142 DISC1Q9NRI5 854 aa17.19■□□□□ 0.34
NUCKS1-201ENST00000367142 RLBP1P12271 317 aa17.19■□□□□ 0.34
NUCKS1-201ENST00000367142 NSFP46459 744 aaKnown RBP17.19■□□□□ 0.34
NUCKS1-201ENST00000367142 RNF10Q8N5U6 811 aaKnown RBP17.19■□□□□ 0.34
NUCKS1-201ENST00000367142 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.19■□□□□ 0.34
NUCKS1-201ENST00000367142 CBX8Q9HC52 389 aa17.19■□□□□ 0.34
NUCKS1-201ENST00000367142 ATP5JP18859 108 aa17.19■□□□□ 0.34
NUCKS1-201ENST00000367142 SUPT20HL1Q3ZLR7 823 aa17.19■□□□□ 0.34
NUCKS1-201ENST00000367142 CCDC93Q567U6 631 aa17.19■□□□□ 0.34
NUCKS1-201ENST00000367142 KIAA1841Q6NSI8 718 aa17.19■□□□□ 0.34
NUCKS1-201ENST00000367142 MIS18BP1Q6P0N0 1132 aa17.19■□□□□ 0.34
NUCKS1-201ENST00000367142 TRIM58Q8NG06 486 aa17.19■□□□□ 0.34
NUCKS1-201ENST00000367142 STAMQ92783 540 aa17.19■□□□□ 0.34
NUCKS1-201ENST00000367142 RPGRIP1Q96KN7 1286 aa17.19■□□□□ 0.34
NUCKS1-201ENST00000367142 LMCD1Q9NZU5 365 aa17.19■□□□□ 0.34
NUCKS1-201ENST00000367142 ADD3Q9UEY8 706 aaKnown RBP17.19■□□□□ 0.34
NUCKS1-201ENST00000367142 U2AF2P26368 475 aaKnown RBP eCLIP17.19■□□□□ 0.342e-6■■□□□ 13.9
NUCKS1-201ENST00000367142 IL13P35225 146 aa17.19■□□□□ 0.34
NUCKS1-201ENST00000367142 KRBA2Q6ZNG9 492 aa17.19■□□□□ 0.34
NUCKS1-201ENST00000367142 ATP6V0A1Q93050 837 aa17.19■□□□□ 0.34
NUCKS1-201ENST00000367142 SPDYE2BA6NHP3 402 aa17.18■□□□□ 0.34
NUCKS1-201ENST00000367142 ARHGAP42A6NI28 874 aa17.18■□□□□ 0.34
NUCKS1-201ENST00000367142 SPDYE6P0CI01 402 aa17.18■□□□□ 0.34
NUCKS1-201ENST00000367142 SAT1P21673 171 aa17.18■□□□□ 0.34
NUCKS1-201ENST00000367142 PNMA1Q8ND90 353 aa17.18■□□□□ 0.34
NUCKS1-201ENST00000367142 TTC1Q99614 292 aa17.18■□□□□ 0.34
NUCKS1-201ENST00000367142 CDR2Q01850 454 aa17.18■□□□□ 0.34
NUCKS1-201ENST00000367142 DBN1Q16643 649 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms