RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 CHST13Q8NET6 341 aa14.75□□□□□ -0.05
MRPL55-209ENST00000366735 KIFC2Q96AC6 838 aa14.75□□□□□ -0.05
MRPL55-209ENST00000366735 GLT1D1Q96MS3 346 aa14.75□□□□□ -0.05
MRPL55-209ENST00000366735 NUP88Q99567 741 aaPredicted RBP14.75□□□□□ -0.05
MRPL55-209ENST00000366735 TMEM39AQ9NV64 488 aa14.75□□□□□ -0.05
MRPL55-209ENST00000366735 CLIP2Q9UDT6 1046 aa14.75□□□□□ -0.05
MRPL55-209ENST00000366735 ISY1Q9ULR0 285 aaKnown RBP14.75□□□□□ -0.05
MRPL55-209ENST00000366735 LAMA2P24043 3122 aaKnown RBP14.75□□□□□ -0.05
MRPL55-209ENST00000366735 TTC41PQ6P2S7 1318 aa14.74□□□□□ -0.05
MRPL55-209ENST00000366735 TRIM43BA6NCK2 446 aa14.74□□□□□ -0.05
MRPL55-209ENST00000366735 KIAA0355O15063 1070 aa14.74□□□□□ -0.05
MRPL55-209ENST00000366735 ADAMTS4O75173 837 aa14.74□□□□□ -0.05
MRPL55-209ENST00000366735 DUSP11O75319 330 aaKnown RBP14.74□□□□□ -0.05
MRPL55-209ENST00000366735 CHGBP05060 677 aa14.74□□□□□ -0.05
MRPL55-209ENST00000366735 TSPY3P0CV98 308 aa14.74□□□□□ -0.05
MRPL55-209ENST00000366735 TSPY8P0CW00 308 aa14.74□□□□□ -0.05
MRPL55-209ENST00000366735 SLC4A3P48751 1232 aa14.74□□□□□ -0.05
MRPL55-209ENST00000366735 ACLYP53396 1101 aa14.74□□□□□ -0.05
MRPL55-209ENST00000366735 SH3RF1Q7Z6J0 888 aa14.74□□□□□ -0.05
MRPL55-209ENST00000366735 STK11IPQ8N1F8 1099 aa14.74□□□□□ -0.05
MRPL55-209ENST00000366735 GMCL1P1Q8NEA9 526 aa14.74□□□□□ -0.05
MRPL55-209ENST00000366735 TRIM43Q96BQ3 446 aaPredicted RBP14.74□□□□□ -0.05
MRPL55-209ENST00000366735 TOX2Q96NM4 488 aa14.74□□□□□ -0.05
MRPL55-209ENST00000366735 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.74□□□□□ -0.05
MRPL55-209ENST00000366735 UNC80Q8N2C7 3258 aa14.74□□□□□ -0.05
MRPL55-209ENST00000366735 DNAJC25-GNG10A0A024R161 153 aa14.73□□□□□ -0.05
MRPL55-209ENST00000366735 TAL1P17542 331 aaPredicted RBP14.73□□□□□ -0.05
MRPL55-209ENST00000366735 CST5P28325 142 aaPredicted RBP14.73□□□□□ -0.05
MRPL55-209ENST00000366735 ANKRD33Q7Z3H0 272 aa14.73□□□□□ -0.05
MRPL55-209ENST00000366735 OSBP2Q969R2 916 aa14.73□□□□□ -0.05
MRPL55-209ENST00000366735 CEP95Q96GE4 821 aa14.73□□□□□ -0.05
MRPL55-209ENST00000366735 NAPBQ9H115 298 aa14.73□□□□□ -0.05
MRPL55-209ENST00000366735 ABHD16BQ9H3Z7 469 aa14.73□□□□□ -0.05
MRPL55-209ENST00000366735 SLC38A10Q9HBR0 1119 aa14.73□□□□□ -0.05
MRPL55-209ENST00000366735 GBF1Q92538 1859 aa14.73□□□□□ -0.05
MRPL55-209ENST00000366735 ELP1O95163 1332 aa14.72□□□□□ -0.05
MRPL55-209ENST00000366735 IGKV6D-41A0A0C4DH26 115 aa14.72□□□□□ -0.05
MRPL55-209ENST00000366735 PATL2C9JE40 543 aaKnown RBP14.72□□□□□ -0.05
MRPL55-209ENST00000366735 TLR3O15455 904 aaKnown RBP14.72□□□□□ -0.05
MRPL55-209ENST00000366735 C6orf222P0C671 652 aaPredicted RBP14.72□□□□□ -0.05
MRPL55-209ENST00000366735 BMP3P12645 472 aa14.72□□□□□ -0.05
MRPL55-209ENST00000366735 STAT2P52630 851 aa14.72□□□□□ -0.05
MRPL55-209ENST00000366735 IKQ13123 557 aaPredicted RBP14.72□□□□□ -0.05
MRPL55-209ENST00000366735 FAM160B2Q86V87 743 aa14.72□□□□□ -0.05
MRPL55-209ENST00000366735 MAFAQ8NHW3 353 aaPredicted RBP14.72□□□□□ -0.05
MRPL55-209ENST00000366735 MKL1Q969V6 931 aa14.72□□□□□ -0.05
MRPL55-209ENST00000366735 LENG1Q96BZ8 264 aaPredicted RBP14.72□□□□□ -0.05
MRPL55-209ENST00000366735 CDX2Q99626 313 aaPredicted RBP14.72□□□□□ -0.05
MRPL55-209ENST00000366735 SEMA6BQ9H3T3 888 aa14.72□□□□□ -0.05
MRPL55-209ENST00000366735 DCTPP1Q9H773 170 aa14.72□□□□□ -0.05
MRPL55-209ENST00000366735 ACAD9Q9H845 621 aa14.72□□□□□ -0.05
MRPL55-209ENST00000366735 EPB41L4AQ9HCS5 686 aaPredicted RBP14.72□□□□□ -0.05
MRPL55-209ENST00000366735 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.72□□□□□ -0.05
MRPL55-209ENST00000366735 MTMR4Q9NYA4 1195 aa14.72□□□□□ -0.05
MRPL55-209ENST00000366735 STK24Q9Y6E0 443 aa14.72□□□□□ -0.05
MRPL55-209ENST00000366735 LCTP09848 1927 aa14.72□□□□□ -0.05
MRPL55-209ENST00000366735 A0A0U1RQG5 324 aaPredicted RBP14.71□□□□□ -0.05
MRPL55-209ENST00000366735 PRDM1O75626 825 aa14.71□□□□□ -0.05
MRPL55-209ENST00000366735 FOSL2P15408 326 aa14.71□□□□□ -0.05
MRPL55-209ENST00000366735 PPIGQ13427 754 aaKnown RBP eCLIP14.71□□□□□ -0.056e-7■■■■□ 20.4
MRPL55-209ENST00000366735 ACVR2BQ13705 512 aa14.71□□□□□ -0.05
MRPL55-209ENST00000366735 KCNA10Q16322 511 aa14.71□□□□□ -0.05
MRPL55-209ENST00000366735 SLFN13Q68D06 897 aa14.71□□□□□ -0.05
MRPL55-209ENST00000366735 IFNL3Q8IZI9 196 aa14.71□□□□□ -0.05
MRPL55-209ENST00000366735 LRRC47Q8N1G4 583 aaKnown RBP14.71□□□□□ -0.05
MRPL55-209ENST00000366735 KLHDC9Q8NEP7 349 aa14.71□□□□□ -0.05
MRPL55-209ENST00000366735 CHURC1Q8WUH1 139 aa14.71□□□□□ -0.05
MRPL55-209ENST00000366735 FSD1Q9BTV5 496 aa14.71□□□□□ -0.05
MRPL55-209ENST00000366735 RAVER2Q9HCJ3 691 aaKnown RBP14.71□□□□□ -0.05
MRPL55-209ENST00000366735 RIPK3Q9Y572 518 aa14.71□□□□□ -0.05
MRPL55-209ENST00000366735 MYH6P13533 1939 aa14.7□□□□□ -0.06
MRPL55-209ENST00000366735 M0R2C6 588 aa14.7□□□□□ -0.06
MRPL55-209ENST00000366735 SNAI1O95863 264 aaPredicted RBP14.7□□□□□ -0.06
MRPL55-209ENST00000366735 TKFCQ3LXA3 575 aa14.7□□□□□ -0.06
MRPL55-209ENST00000366735 CENPQQ7L2Z9 268 aaPredicted RBP14.7□□□□□ -0.06
MRPL55-209ENST00000366735 ARMCX2Q7L311 632 aa14.7□□□□□ -0.06
MRPL55-209ENST00000366735 NEDD1Q8NHV4 660 aa14.7□□□□□ -0.06
MRPL55-209ENST00000366735 VTI1AQ96AJ9 217 aa14.7□□□□□ -0.06
MRPL55-209ENST00000366735 UPF3AQ9H1J1 476 aaKnown RBP14.7□□□□□ -0.06
MRPL55-209ENST00000366735 CUL9Q8IWT3 2517 aa14.69□□□□□ -0.06
MRPL55-209ENST00000366735 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.69□□□□□ -0.06
MRPL55-209ENST00000366735 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.69□□□□□ -0.06
MRPL55-209ENST00000366735 ASB14A6NK59 587 aa14.69□□□□□ -0.06
MRPL55-209ENST00000366735 TIMP1P01033 207 aa14.69□□□□□ -0.06
MRPL55-209ENST00000366735 ASGR1P07306 291 aa14.69□□□□□ -0.06
MRPL55-209ENST00000366735 SLC1A4P43007 532 aa14.69□□□□□ -0.06
MRPL55-209ENST00000366735 GJA9P57773 515 aa14.69□□□□□ -0.06
MRPL55-209ENST00000366735 PPARAQ07869 468 aa14.69□□□□□ -0.06
MRPL55-209ENST00000366735 FAAP100Q0VG06 881 aa14.69□□□□□ -0.06
MRPL55-209ENST00000366735 CCDC144BQ3MJ40 725 aa14.69□□□□□ -0.06
MRPL55-209ENST00000366735 TSHZ3Q63HK5 1081 aa14.69□□□□□ -0.06
MRPL55-209ENST00000366735 TMEM199Q8N511 208 aa14.69□□□□□ -0.06
MRPL55-209ENST00000366735 MYLIPQ8WY64 445 aa14.69□□□□□ -0.06
MRPL55-209ENST00000366735 GMCL1Q96IK5 515 aa14.69□□□□□ -0.06
MRPL55-209ENST00000366735 COL25A1Q9BXS0 654 aaPredicted RBP14.69□□□□□ -0.06
MRPL55-209ENST00000366735 MTIF3Q9H2K0 278 aaKnown RBP14.69□□□□□ -0.06
MRPL55-209ENST00000366735 HOMER2Q9NSB8 354 aa14.69□□□□□ -0.06
MRPL55-209ENST00000366735 CDH23Q9H251 3354 aa14.68□□□□□ -0.06
MRPL55-209ENST00000366735 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.68□□□□□ -0.06
MRPL55-209ENST00000366735 TSPY2A6NKD2 308 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms