RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 TROAPQ12815 778 aa21.97■■□□□ 1.11
TRIM58-201ENST00000366481 CT47A1Q5JQC4 288 aaPredicted RBP21.97■■□□□ 1.11
TRIM58-201ENST00000366481 RNF26Q9BY78 433 aaPredicted RBP21.97■■□□□ 1.11
TRIM58-201ENST00000366481 COL4A1P02462 1669 aa21.96■■□□□ 1.11
TRIM58-201ENST00000366481 GBP6Q6ZN66 633 aa21.96■■□□□ 1.11
TRIM58-201ENST00000366481 TRIML1Q8N9V2 468 aa21.96■■□□□ 1.11
TRIM58-201ENST00000366481 JAKMIP2Q96AA8 810 aa21.96■■□□□ 1.11
TRIM58-201ENST00000366481 PSMB7Q99436 277 aa21.96■■□□□ 1.11
TRIM58-201ENST00000366481 PHF20Q9BVI0 1012 aa21.96■■□□□ 1.11
TRIM58-201ENST00000366481 GDAQ9Y2T3 454 aa21.96■■□□□ 1.11
TRIM58-201ENST00000366481 ZNF185O15231 689 aa21.96■■□□□ 1.11
TRIM58-201ENST00000366481 FUT2Q10981 343 aa21.96■■□□□ 1.11
TRIM58-201ENST00000366481 FAM84BQ96KN1 310 aaPredicted RBP21.96■■□□□ 1.11
TRIM58-201ENST00000366481 C2orf54Q08AI8 447 aa21.95■■□□□ 1.1
TRIM58-201ENST00000366481 KCTD16Q68DU8 428 aa21.95■■□□□ 1.1
TRIM58-201ENST00000366481 NGLY1Q96IV0 654 aa21.95■■□□□ 1.1
TRIM58-201ENST00000366481 VIPAS39Q9H9C1 493 aa21.95■■□□□ 1.1
TRIM58-201ENST00000366481 PRPF6O94906 941 aaKnown RBP21.95■■□□□ 1.1
TRIM58-201ENST00000366481 CAVIN4Q5BKX8 364 aa21.95■■□□□ 1.1
TRIM58-201ENST00000366481 MSL3Q8N5Y2 521 aaKnown RBP21.95■■□□□ 1.1
TRIM58-201ENST00000366481 CEP89Q96ST8 783 aa21.95■■□□□ 1.1
TRIM58-201ENST00000366481 TRIM49BA6NDI0 452 aa21.95■■□□□ 1.1
TRIM58-201ENST00000366481 TXNRD3Q86VQ6 643 aa21.95■■□□□ 1.1
TRIM58-201ENST00000366481 CCDC51Q96ER9 411 aa21.95■■□□□ 1.1
TRIM58-201ENST00000366481 DYNLL2Q96FJ2 89 aa21.95■■□□□ 1.1
TRIM58-201ENST00000366481 EP400Q96L91 3159 aa21.95■■□□□ 1.1
TRIM58-201ENST00000366481 SRCAPQ6ZRS2 3230 aa21.94■■□□□ 1.1
TRIM58-201ENST00000366481 SHANK3Q9BYB0 1731 aa21.94■■□□□ 1.1
TRIM58-201ENST00000366481 TSPY2A6NKD2 308 aa21.94■■□□□ 1.1
TRIM58-201ENST00000366481 USP17L8P0C7I0 530 aa21.94■■□□□ 1.1
TRIM58-201ENST00000366481 MYBL2P10244 700 aa21.94■■□□□ 1.1
TRIM58-201ENST00000366481 KRT31Q15323 416 aa21.94■■□□□ 1.1
TRIM58-201ENST00000366481 IL17AQ16552 155 aa21.94■■□□□ 1.1
TRIM58-201ENST00000366481 NT5DC1Q5TFE4 455 aa21.94■■□□□ 1.1
TRIM58-201ENST00000366481 PTF1AQ7RTS3 328 aa21.94■■□□□ 1.1
TRIM58-201ENST00000366481 MTRQ99707 1265 aa21.94■■□□□ 1.1
TRIM58-201ENST00000366481 MINPP1Q9UNW1 487 aa21.94■■□□□ 1.1
TRIM58-201ENST00000366481 NDUFA10O95299 355 aa21.94■■□□□ 1.1
TRIM58-201ENST00000366481 IDEP14735 1019 aa21.94■■□□□ 1.1
TRIM58-201ENST00000366481 ARHGAP25P42331 645 aa21.94■■□□□ 1.1
TRIM58-201ENST00000366481 MECOMQ03112 1051 aa21.94■■□□□ 1.1
TRIM58-201ENST00000366481 CKAP4Q07065 602 aaKnown RBP21.94■■□□□ 1.1
TRIM58-201ENST00000366481 PPFIA1Q13136 1202 aa21.94■■□□□ 1.1
TRIM58-201ENST00000366481 NPY5RQ15761 445 aa21.94■■□□□ 1.1
TRIM58-201ENST00000366481 APTXQ7Z2E3 356 aaKnown RBP21.94■■□□□ 1.1
TRIM58-201ENST00000366481 POTEDQ86YR6 584 aa21.94■■□□□ 1.1
TRIM58-201ENST00000366481 MARCH10Q8NA82 808 aaPredicted RBP21.94■■□□□ 1.1
TRIM58-201ENST00000366481 GPR101Q96P66 508 aaPredicted RBP21.94■■□□□ 1.1
TRIM58-201ENST00000366481 MYO1AQ9UBC5 1043 aa21.94■■□□□ 1.1
TRIM58-201ENST00000366481 COL1A1P02452 1464 aaPredicted RBP21.94■■□□□ 1.1
TRIM58-201ENST00000366481 XDHP47989 1333 aa21.94■■□□□ 1.1
TRIM58-201ENST00000366481 PPP1R3GB7ZBB8 358 aa21.93■■□□□ 1.1
TRIM58-201ENST00000366481 MYO1FO00160 1098 aa21.93■■□□□ 1.1
TRIM58-201ENST00000366481 PDCLQ13371 301 aa21.93■■□□□ 1.1
TRIM58-201ENST00000366481 FAM212AQ96EL1 285 aa21.93■■□□□ 1.1
TRIM58-201ENST00000366481 CCDC172P0C7W6 258 aa21.93■■□□□ 1.1
TRIM58-201ENST00000366481 AARSP49588 968 aaKnown RBP eCLIP21.93■■□□□ 1.1
TRIM58-201ENST00000366481 STAG2Q8N3U4 1231 aa21.93■■□□□ 1.1
TRIM58-201ENST00000366481 MYCNP04198 464 aaPredicted RBP21.92■■□□□ 1.1
TRIM58-201ENST00000366481 DHX37Q8IY37 1157 aaKnown RBP21.92■■□□□ 1.1
TRIM58-201ENST00000366481 ZNF579Q8NAF0 562 aaKnown RBP21.92■■□□□ 1.1
TRIM58-201ENST00000366481 MCM9Q9NXL9 1143 aa21.92■■□□□ 1.1
TRIM58-201ENST00000366481 SRP68Q9UHB9 627 aaKnown RBP21.92■■□□□ 1.1
TRIM58-201ENST00000366481 LUC7L2Q9Y383 392 aaKnown RBP21.92■■□□□ 1.1
TRIM58-201ENST00000366481 PAPPAQ13219 1627 aa21.92■■□□□ 1.1
TRIM58-201ENST00000366481 ERCC3P19447 782 aa21.92■■□□□ 1.1
TRIM58-201ENST00000366481 SLC7A5Q01650 507 aa21.92■■□□□ 1.1
TRIM58-201ENST00000366481 GOLGA8HP0CJ92 632 aa21.91■■□□□ 1.1
TRIM58-201ENST00000366481 TMTC3Q6ZXV5 915 aa21.91■■□□□ 1.1
TRIM58-201ENST00000366481 SLC44A5Q8NCS7 719 aa21.91■■□□□ 1.1
TRIM58-201ENST00000366481 RTL9Q8NET4 1388 aa21.91■■□□□ 1.1
TRIM58-201ENST00000366481 PRPF3O43395 683 aaKnown RBP21.91■■□□□ 1.1
TRIM58-201ENST00000366481 CPP00450 1065 aa21.91■■□□□ 1.1
TRIM58-201ENST00000366481 MYH2Q9UKX2 1941 aa21.91■■□□□ 1.1
TRIM58-201ENST00000366481 NUP98P52948 1817 aa21.9■■□□□ 1.1
TRIM58-201ENST00000366481 KRT86O43790 486 aa21.9■■□□□ 1.1
TRIM58-201ENST00000366481 DNA2P51530 1060 aa21.9■■□□□ 1.1
TRIM58-201ENST00000366481 COPB1P53618 953 aaKnown RBP21.9■■□□□ 1.1
TRIM58-201ENST00000366481 ATP2B2Q01814 1243 aa21.9■■□□□ 1.1
TRIM58-201ENST00000366481 CEP83Q9Y592 693 aa21.9■■□□□ 1.1
TRIM58-201ENST00000366481 TAF1P21675 1872 aa21.9■■□□□ 1.1
TRIM58-201ENST00000366481 FAM205AQ6ZU69 1335 aa21.9■■□□□ 1.1
TRIM58-201ENST00000366481 AMPD2Q01433 879 aa21.9■■□□□ 1.1
TRIM58-201ENST00000366481 PARP10Q53GL7 1025 aa21.9■■□□□ 1.1
TRIM58-201ENST00000366481 CCDC181Q5TID7 509 aa21.9■■□□□ 1.1
TRIM58-201ENST00000366481 CCNI2Q6ZMN8 369 aaPredicted RBP21.9■■□□□ 1.1
TRIM58-201ENST00000366481 SPATA20Q8TB22 786 aa21.9■■□□□ 1.1
TRIM58-201ENST00000366481 RRP36Q96EU6 259 aaKnown RBP21.9■■□□□ 1.1
TRIM58-201ENST00000366481 HAUS4Q9H6D7 363 aa21.9■■□□□ 1.1
TRIM58-201ENST00000366481 DCP1AQ9NPI6 582 aaPredicted RBP21.9■■□□□ 1.1
TRIM58-201ENST00000366481 ZNHIT6Q9NWK9 470 aaKnown RBP21.9■■□□□ 1.1
TRIM58-201ENST00000366481 USP17L3A6NCW0 530 aa21.89■■□□□ 1.1
TRIM58-201ENST00000366481 USP17L4A6NCW7 530 aa21.89■■□□□ 1.1
TRIM58-201ENST00000366481 SWT1Q5T5J6 900 aaKnown RBP21.89■■□□□ 1.1
TRIM58-201ENST00000366481 USP17L1Q7RTZ2 530 aa21.89■■□□□ 1.1
TRIM58-201ENST00000366481 TRAPPC11Q7Z392 1133 aa21.89■■□□□ 1.1
TRIM58-201ENST00000366481 SUFUQ9UMX1 484 aa21.89■■□□□ 1.1
TRIM58-201ENST00000366481 CNTNAP5Q8WYK1 1306 aa21.89■■□□□ 1.1
TRIM58-201ENST00000366481 KCNJ18B7U540 433 aa21.89■■□□□ 1.09
TRIM58-201ENST00000366481 KCNJ12Q14500 433 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms