RNA–Protein interactions for RNA: ENST00000361901.6

CALD1-202, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,114 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-202ENST00000361901 IFNKQ9P0W0 207 aa10.31□□□□□ -0.76
CALD1-202ENST00000361901 PIM2Q9P1W9 311 aa10.31□□□□□ -0.76
CALD1-202ENST00000361901 TCHHQ07283 1943 aa10.31□□□□□ -0.76
CALD1-202ENST00000361901 TMEM232C9JQI7 657 aa10.31□□□□□ -0.76
CALD1-202ENST00000361901 TTLL1O95922 423 aa10.31□□□□□ -0.76
CALD1-202ENST00000361901 VEGFAP15692 232 aaPredicted RBP10.31□□□□□ -0.76
CALD1-202ENST00000361901 ERCC3P19447 782 aa10.31□□□□□ -0.76
CALD1-202ENST00000361901 TMEM266Q2M3C6 531 aa10.31□□□□□ -0.76
CALD1-202ENST00000361901 DPCR1Q3MIW9 517 aa10.31□□□□□ -0.76
CALD1-202ENST00000361901 LONRF3Q496Y0 759 aa10.31□□□□□ -0.76
CALD1-202ENST00000361901 DALRD3Q5D0E6 543 aaKnown RBP10.31□□□□□ -0.76
CALD1-202ENST00000361901 CC2D2BQ6DHV5 1058 aa10.31□□□□□ -0.76
CALD1-202ENST00000361901 TTBK2Q6IQ55 1244 aa10.31□□□□□ -0.76
CALD1-202ENST00000361901 CCDC84Q86UT8 332 aaPredicted RBP10.31□□□□□ -0.76
CALD1-202ENST00000361901 CERS5Q8N5B7 392 aa10.31□□□□□ -0.76
CALD1-202ENST00000361901 GOLGA5Q8TBA6 731 aa10.31□□□□□ -0.76
CALD1-202ENST00000361901 SRRTQ9BXP5 876 aaKnown RBP10.31□□□□□ -0.76
CALD1-202ENST00000361901 FOXP1Q9H334 677 aaPredicted RBP10.31□□□□□ -0.76
CALD1-202ENST00000361901 URI1O94763 535 aaPredicted RBP10.31□□□□□ -0.76
CALD1-202ENST00000361901 NOP2P46087 812 aaKnown RBP10.31□□□□□ -0.76
CALD1-202ENST00000361901 NTRK3Q16288 839 aa10.31□□□□□ -0.76
CALD1-202ENST00000361901 CRY2Q49AN0 593 aa10.31□□□□□ -0.76
CALD1-202ENST00000361901 RNF217Q8TC41 542 aa10.31□□□□□ -0.76
CALD1-202ENST00000361901 CUL5Q93034 780 aa10.31□□□□□ -0.76
CALD1-202ENST00000361901 PI4KBQ9UBF8 816 aa10.31□□□□□ -0.76
CALD1-202ENST00000361901 DACH1Q9UI36 760 aa10.31□□□□□ -0.76
CALD1-202ENST00000361901 EP400Q96L91 3159 aa10.3□□□□□ -0.76
CALD1-202ENST00000361901 HOXA10P31260 410 aaPredicted RBP10.3□□□□□ -0.76
CALD1-202ENST00000361901 GRIN1Q05586 938 aa10.3□□□□□ -0.76
CALD1-202ENST00000361901 NONOQ15233 471 aaKnown RBP eCLIP10.3□□□□□ -0.76
CALD1-202ENST00000361901 UBE2SQ16763 222 aa10.3□□□□□ -0.76
CALD1-202ENST00000361901 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.3□□□□□ -0.76
CALD1-202ENST00000361901 VPS18Q9P253 973 aa10.3□□□□□ -0.76
CALD1-202ENST00000361901 PCDHA5Q9Y5H7 936 aa10.3□□□□□ -0.76
CALD1-202ENST00000361901 TAF1P21675 1872 aa10.3□□□□□ -0.76
CALD1-202ENST00000361901 CTIFO43310 598 aaKnown RBP10.3□□□□□ -0.76
CALD1-202ENST00000361901 CFBP00751 764 aa10.3□□□□□ -0.76
CALD1-202ENST00000361901 SEMA3FQ13275 785 aa10.3□□□□□ -0.76
CALD1-202ENST00000361901 SEC23AQ15436 765 aa10.3□□□□□ -0.76
CALD1-202ENST00000361901 TBC1D10BQ4KMP7 808 aaPredicted RBP10.3□□□□□ -0.76
CALD1-202ENST00000361901 WDR78Q5VTH9 848 aa10.3□□□□□ -0.76
CALD1-202ENST00000361901 USP49Q70CQ1 688 aa10.3□□□□□ -0.76
CALD1-202ENST00000361901 ZFPM1Q8IX07 1006 aa10.3□□□□□ -0.76
CALD1-202ENST00000361901 SYMPKQ92797 1274 aaKnown RBP10.3□□□□□ -0.76
CALD1-202ENST00000361901 IL17RAQ96F46 866 aa10.3□□□□□ -0.76
CALD1-202ENST00000361901 CALML4Q96GE6 196 aa10.3□□□□□ -0.76
CALD1-202ENST00000361901 DDX4Q9NQI0 724 aaKnown RBP10.3□□□□□ -0.76
CALD1-202ENST00000361901 FOXN1O15353 648 aa10.3□□□□□ -0.76
CALD1-202ENST00000361901 TECP42680 631 aa10.3□□□□□ -0.76
CALD1-202ENST00000361901 UBASH3AP57075 661 aa10.3□□□□□ -0.76
CALD1-202ENST00000361901 SBK1Q52WX2 424 aa10.3□□□□□ -0.76
CALD1-202ENST00000361901 SRLQ86TD4 932 aa10.3□□□□□ -0.76
CALD1-202ENST00000361901 LAMB4A4D0S4 1761 aa10.3□□□□□ -0.76
CALD1-202ENST00000361901 BMP15O95972 392 aa10.29□□□□□ -0.76
CALD1-202ENST00000361901 IL1R1P14778 569 aa10.29□□□□□ -0.76
CALD1-202ENST00000361901 MAGEA9P43362 315 aa10.29□□□□□ -0.76
CALD1-202ENST00000361901 ADCY7P51828 1080 aa10.29□□□□□ -0.76
CALD1-202ENST00000361901 KARSQ15046 597 aaKnown RBP10.29□□□□□ -0.76
CALD1-202ENST00000361901 AP1ARQ63HQ0 302 aa10.29□□□□□ -0.76
CALD1-202ENST00000361901 SMYD4Q8IYR2 804 aaPredicted RBP10.29□□□□□ -0.76
CALD1-202ENST00000361901 IQUBQ8NA54 791 aa10.29□□□□□ -0.76
CALD1-202ENST00000361901 PRMT6Q96LA8 375 aaPredicted RBP10.29□□□□□ -0.76
CALD1-202ENST00000361901 ANAPC4Q9UJX5 808 aa10.29□□□□□ -0.76
CALD1-202ENST00000361901 ATRNO75882 1429 aa10.29□□□□□ -0.76
CALD1-202ENST00000361901 SPDYE3A6NKU9 549 aa10.29□□□□□ -0.76
CALD1-202ENST00000361901 EIF3JO75822 258 aaKnown RBP10.29□□□□□ -0.76
CALD1-202ENST00000361901 MRPL12P52815 198 aaKnown RBP10.29□□□□□ -0.76
CALD1-202ENST00000361901 MCM6Q14566 821 aa10.29□□□□□ -0.76
CALD1-202ENST00000361901 POSTNQ15063 836 aa10.29□□□□□ -0.76
CALD1-202ENST00000361901 FILIP1LQ4L180 1135 aa10.29□□□□□ -0.76
CALD1-202ENST00000361901 PRAMEF18Q5VWM3 479 aa10.29□□□□□ -0.76
CALD1-202ENST00000361901 PSMD1Q99460 953 aa10.29□□□□□ -0.76
CALD1-202ENST00000361901 OSBPL5Q9H0X9 879 aaPredicted RBP10.29□□□□□ -0.76
CALD1-202ENST00000361901 IL17RBQ9NRM6 502 aa10.29□□□□□ -0.76
CALD1-202ENST00000361901 PCDHA1Q9Y5I3 950 aa10.29□□□□□ -0.76
CALD1-202ENST00000361901 UBXN2AP68543 259 aa10.29□□□□□ -0.76
CALD1-202ENST00000361901 ASIC1P78348 528 aa10.29□□□□□ -0.76
CALD1-202ENST00000361901 STIM1Q13586 685 aa10.29□□□□□ -0.76
CALD1-202ENST00000361901 ILDR1Q86SU0 546 aaPredicted RBP10.29□□□□□ -0.76
CALD1-202ENST00000361901 RTKN2Q8IZC4 609 aa10.29□□□□□ -0.76
CALD1-202ENST00000361901 NEDD1Q8NHV4 660 aa10.29□□□□□ -0.76
CALD1-202ENST00000361901 TAOK3Q9H2K8 898 aa10.29□□□□□ -0.76
CALD1-202ENST00000361901 ABCA3Q99758 1704 aa10.29□□□□□ -0.76
CALD1-202ENST00000361901 PSMD14O00487 310 aa10.28□□□□□ -0.76
CALD1-202ENST00000361901 EEF2P13639 858 aaKnown RBP10.28□□□□□ -0.76
CALD1-202ENST00000361901 PPP4CP60510 307 aa10.28□□□□□ -0.76
CALD1-202ENST00000361901 TSR1Q2NL82 804 aaKnown RBP10.28□□□□□ -0.76
CALD1-202ENST00000361901 STRIP1Q5VSL9 837 aa10.28□□□□□ -0.76
CALD1-202ENST00000361901 TANGO6Q9C0B7 1094 aa10.28□□□□□ -0.76
CALD1-202ENST00000361901 ARFGAP3Q9NP61 516 aa10.28□□□□□ -0.76
CALD1-202ENST00000361901 ZCCHC17Q9NP64 241 aaKnown RBP10.28□□□□□ -0.76
CALD1-202ENST00000361901 TMEM260Q9NX78 707 aa10.28□□□□□ -0.76
CALD1-202ENST00000361901 KIAA0754O94854 1291 aa10.28□□□□□ -0.76
CALD1-202ENST00000361901 SNW1Q13573 536 aaKnown RBP10.28□□□□□ -0.76
CALD1-202ENST00000361901 PLS1Q14651 629 aa10.28□□□□□ -0.76
CALD1-202ENST00000361901 WWC2Q6AWC2 1192 aa10.28□□□□□ -0.76
CALD1-202ENST00000361901 KANK3Q6NY19 840 aa10.28□□□□□ -0.76
CALD1-202ENST00000361901 SHC4Q6S5L8 630 aa10.28□□□□□ -0.76
CALD1-202ENST00000361901 AKT1S1Q96B36 256 aa10.28□□□□□ -0.76
CALD1-202ENST00000361901 RAB34Q9BZG1 259 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms