RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 CCDC144BQ3MJ40 725 aa25.17■■□□□ 1.62
CD47-202ENST00000361309 PCSK9Q8NBP7 692 aaKnown RBP25.17■■□□□ 1.62
CD47-202ENST00000361309 CHST13Q8NET6 341 aa25.17■■□□□ 1.62
CD47-202ENST00000361309 FBXO40Q9UH90 709 aa25.17■■□□□ 1.62
CD47-202ENST00000361309 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.16■■□□□ 1.62
CD47-202ENST00000361309 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.16■■□□□ 1.62
CD47-202ENST00000361309 PATL2C9JE40 543 aaKnown RBP25.16■■□□□ 1.62
CD47-202ENST00000361309 CDK7P50613 346 aa25.16■■□□□ 1.62
CD47-202ENST00000361309 ARMCX2Q7L311 632 aa25.16■■□□□ 1.62
CD47-202ENST00000361309 IFNL3Q8IZI9 196 aa25.16■■□□□ 1.62
CD47-202ENST00000361309 GMCL1P1Q8NEA9 526 aa25.16■■□□□ 1.62
CD47-202ENST00000361309 VTI1AQ96AJ9 217 aa25.16■■□□□ 1.62
CD47-202ENST00000361309 UPF3AQ9H1J1 476 aaKnown RBP25.16■■□□□ 1.62
CD47-202ENST00000361309 SPC25Q9HBM1 224 aa25.16■■□□□ 1.62
CD47-202ENST00000361309 SYNPO2Q9UMS6 1093 aa25.16■■□□□ 1.62
CD47-202ENST00000361309 MROH7Q68CQ1 1323 aa25.15■■□□□ 1.62
CD47-202ENST00000361309 BMP3P12645 472 aa25.15■■□□□ 1.62
CD47-202ENST00000361309 DNAJB2P25686 324 aa25.15■■□□□ 1.62
CD47-202ENST00000361309 OAZ1P54368 228 aa25.15■■□□□ 1.62
CD47-202ENST00000361309 GJA9P57773 515 aa25.15■■□□□ 1.62
CD47-202ENST00000361309 SLFN13Q68D06 897 aa25.15■■□□□ 1.62
CD47-202ENST00000361309 CCDC144CPQ8IYA2 1237 aa25.15■■□□□ 1.62
CD47-202ENST00000361309 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.15■■□□□ 1.62
CD47-202ENST00000361309 DCTPP1Q9H773 170 aa25.15■■□□□ 1.62
CD47-202ENST00000361309 HOMER2Q9NSB8 354 aa25.15■■□□□ 1.62
CD47-202ENST00000361309 GRIN2CQ14957 1233 aa25.14■■□□□ 1.62
CD47-202ENST00000361309 GNASQ5JWF2 1037 aa25.14■■□□□ 1.62
CD47-202ENST00000361309 MFSD5Q6N075 450 aa25.14■■□□□ 1.62
CD47-202ENST00000361309 PLIN4Q96Q06 1357 aa25.14■■□□□ 1.61
CD47-202ENST00000361309 A0A0U1RQG5 324 aaPredicted RBP25.13■■□□□ 1.61
CD47-202ENST00000361309 ARVCFO00192 962 aa25.13■■□□□ 1.61
CD47-202ENST00000361309 TSPY3P0CV98 308 aa25.13■■□□□ 1.61
CD47-202ENST00000361309 TSPY8P0CW00 308 aa25.13■■□□□ 1.61
CD47-202ENST00000361309 CNTN2Q02246 1040 aa25.13■■□□□ 1.61
CD47-202ENST00000361309 NEDD1Q8NHV4 660 aa25.13■■□□□ 1.61
CD47-202ENST00000361309 SEC62Q99442 399 aaKnown RBP25.13■■□□□ 1.61
CD47-202ENST00000361309 KATNBL1Q9H079 304 aa25.13■■□□□ 1.61
CD47-202ENST00000361309 ISY1Q9ULR0 285 aaKnown RBP25.13■■□□□ 1.61
CD47-202ENST00000361309 TTC28Q96AY4 2481 aa25.13■■□□□ 1.61
CD47-202ENST00000361309 TMEM232C9JQI7 657 aa25.12■■□□□ 1.61
CD47-202ENST00000361309 PPIGQ13427 754 aaKnown RBP eCLIP25.12■■□□□ 1.61
CD47-202ENST00000361309 CHMP4CQ96CF2 233 aa25.12■■□□□ 1.61
CD47-202ENST00000361309 NACAP1Q9BZK3 213 aa25.12■■□□□ 1.61
CD47-202ENST00000361309 ACAD9Q9H845 621 aa25.12■■□□□ 1.61
CD47-202ENST00000361309 GBF1Q92538 1859 aa25.12■■□□□ 1.61
CD47-202ENST00000361309 LRRC37A2A6NM11 1700 aa25.12■■□□□ 1.61
CD47-202ENST00000361309 CTAGE5O15320 804 aa25.11■■□□□ 1.61
CD47-202ENST00000361309 FDX1P10109 184 aa25.11■■□□□ 1.61
CD47-202ENST00000361309 TFAP4Q01664 338 aa25.11■■□□□ 1.61
CD47-202ENST00000361309 PDE4BQ07343 736 aa25.11■■□□□ 1.61
CD47-202ENST00000361309 LRRFIP1Q32MZ4 808 aaKnown RBP25.11■■□□□ 1.61
CD47-202ENST00000361309 TMEM240Q5SV17 173 aa25.11■■□□□ 1.61
CD47-202ENST00000361309 C16orf59Q7L2K0 433 aa25.11■■□□□ 1.61
CD47-202ENST00000361309 FAM126BQ8IXS8 530 aa25.11■■□□□ 1.61
CD47-202ENST00000361309 FAM133AQ8N9E0 248 aa25.11■■□□□ 1.61
CD47-202ENST00000361309 TIFAQ96CG3 184 aa25.11■■□□□ 1.61
CD47-202ENST00000361309 ZNF576Q9H609 170 aa25.11■■□□□ 1.61
CD47-202ENST00000361309 C11orf97A0A1B0GVM6 126 aaPredicted RBP25.1■■□□□ 1.61
CD47-202ENST00000361309 CSF2RAP15509 400 aa25.1■■□□□ 1.61
CD47-202ENST00000361309 STAT2P52630 851 aa25.1■■□□□ 1.61
CD47-202ENST00000361309 BEX3Q00994 111 aa25.1■■□□□ 1.61
CD47-202ENST00000361309 AGBL1Q96MI9 1066 aa25.1■■□□□ 1.61
CD47-202ENST00000361309 PPP1R12CQ9BZL4 782 aa25.1■■□□□ 1.61
CD47-202ENST00000361309 CHD9Q3L8U1 2897 aa25.1■■□□□ 1.61
CD47-202ENST00000361309 LCTP09848 1927 aa25.1■■□□□ 1.61
CD47-202ENST00000361309 ZNF536O15090 1300 aa25.1■■□□□ 1.61
CD47-202ENST00000361309 TLR3O15455 904 aaKnown RBP25.09■■□□□ 1.61
CD47-202ENST00000361309 SLC3A2P08195 630 aaKnown RBP25.09■■□□□ 1.61
CD47-202ENST00000361309 IKQ13123 557 aaPredicted RBP25.09■■□□□ 1.61
CD47-202ENST00000361309 CCDC174Q6PII3 467 aa25.09■■□□□ 1.61
CD47-202ENST00000361309 FAM160B2Q86V87 743 aa25.09■■□□□ 1.61
CD47-202ENST00000361309 TMEM199Q8N511 208 aa25.09■■□□□ 1.61
CD47-202ENST00000361309 CHURC1Q8WUH1 139 aa25.09■■□□□ 1.61
CD47-202ENST00000361309 STAG1Q8WVM7 1258 aa25.09■■□□□ 1.61
CD47-202ENST00000361309 NAPBQ9H115 298 aa25.09■■□□□ 1.61
CD47-202ENST00000361309 A1CFQ9NQ94 594 aaKnown RBP25.09■■□□□ 1.61
CD47-202ENST00000361309 RNF146Q9NTX7 359 aa25.09■■□□□ 1.61
CD47-202ENST00000361309 SOWAHBA6NEL2 793 aa25.08■■□□□ 1.61
CD47-202ENST00000361309 ACRP10323 421 aa25.08■■□□□ 1.61
CD47-202ENST00000361309 MCCP23508 829 aa25.08■■□□□ 1.61
CD47-202ENST00000361309 SLC1A4P43007 532 aa25.08■■□□□ 1.61
CD47-202ENST00000361309 NKX3-2P78367 333 aa25.08■■□□□ 1.61
CD47-202ENST00000361309 TNFAIP2Q03169 654 aa25.08■■□□□ 1.61
CD47-202ENST00000361309 PPARAQ07869 468 aa25.08■■□□□ 1.61
CD47-202ENST00000361309 NOL8Q76FK4 1167 aaKnown RBP25.08■■□□□ 1.61
CD47-202ENST00000361309 USP38Q8NB14 1042 aa25.08■■□□□ 1.61
CD47-202ENST00000361309 GMCL1Q96IK5 515 aa25.08■■□□□ 1.61
CD47-202ENST00000361309 ASTN1O14525 1302 aa25.08■■□□□ 1.6
CD47-202ENST00000361309 GRXCR1A8MXD5 290 aa25.07■■□□□ 1.6
CD47-202ENST00000361309 PBX2P40425 430 aa25.07■■□□□ 1.6
CD47-202ENST00000361309 RASIP1Q5U651 963 aa25.07■■□□□ 1.6
CD47-202ENST00000361309 CCDC129Q6ZRS4 1044 aa25.07■■□□□ 1.6
CD47-202ENST00000361309 ZNF365Q70YC5 407 aa25.07■■□□□ 1.6
CD47-202ENST00000361309 TRERF1Q96PN7 1200 aa25.07■■□□□ 1.6
CD47-202ENST00000361309 TTC41PQ6P2S7 1318 aa25.07■■□□□ 1.6
CD47-202ENST00000361309 ASB14A6NK59 587 aa25.06■■□□□ 1.6
CD47-202ENST00000361309 CD4P01730 458 aa25.06■■□□□ 1.6
CD47-202ENST00000361309 ALAS1P13196 640 aa25.06■■□□□ 1.6
CD47-202ENST00000361309 CYP2C18P33260 490 aa25.06■■□□□ 1.6
CD47-202ENST00000361309 TKFCQ3LXA3 575 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms