RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 CCP110O43303 1012 aa25.58■■□□□ 1.69
LDB1-201ENST00000361198 CCDC93Q567U6 631 aa25.58■■□□□ 1.69
LDB1-201ENST00000361198 DTHD1Q6ZMT9 781 aa25.58■■□□□ 1.69
LDB1-201ENST00000361198 SMYD4Q8IYR2 804 aaPredicted RBP25.58■■□□□ 1.69
LDB1-201ENST00000361198 PYM1Q9BRP8 204 aaKnown RBP25.58■■□□□ 1.69
LDB1-201ENST00000361198 C6orf50Q9HD87 102 aa25.58■■□□□ 1.69
LDB1-201ENST00000361198 SLURP2P0DP57 97 aa25.57■■□□□ 1.68
LDB1-201ENST00000361198 ZNF219Q9P2Y4 722 aaPredicted RBP25.57■■□□□ 1.68
LDB1-201ENST00000361198 PCDHAC2Q9Y5I4 1007 aa25.57■■□□□ 1.68
LDB1-201ENST00000361198 SLX4Q8IY92 1834 aa25.57■■□□□ 1.68
LDB1-201ENST00000361198 H0YIN7 160 aa25.57■■□□□ 1.68
LDB1-201ENST00000361198 CDK11BP21127 795 aaKnown RBP25.57■■□□□ 1.68
LDB1-201ENST00000361198 GNA11P29992 359 aa25.57■■□□□ 1.68
LDB1-201ENST00000361198 CUL4BQ13620 913 aa25.57■■□□□ 1.68
LDB1-201ENST00000361198 KARSQ15046 597 aaKnown RBP25.57■■□□□ 1.68
LDB1-201ENST00000361198 KLHL10Q6JEL2 608 aa25.57■■□□□ 1.68
LDB1-201ENST00000361198 KIAA0825Q8IV33 1275 aa25.57■■□□□ 1.68
LDB1-201ENST00000361198 ZNF397Q8NF99 534 aaPredicted RBP25.57■■□□□ 1.68
LDB1-201ENST00000361198 TTLL1O95922 423 aa25.56■■□□□ 1.68
LDB1-201ENST00000361198 SNHG28P0DPA3 235 aa25.56■■□□□ 1.68
LDB1-201ENST00000361198 ZFPM1Q8IX07 1006 aa25.56■■□□□ 1.68
LDB1-201ENST00000361198 SCN9AQ15858 1988 aa25.56■■□□□ 1.68
LDB1-201ENST00000361198 TXLNAP40222 546 aa25.56■■□□□ 1.68
LDB1-201ENST00000361198 CT47A1Q5JQC4 288 aaPredicted RBP25.56■■□□□ 1.68
LDB1-201ENST00000361198 KRT25Q7Z3Z0 450 aa25.56■■□□□ 1.68
LDB1-201ENST00000361198 GTPBP4Q9BZE4 634 aaKnown RBP25.56■■□□□ 1.68
LDB1-201ENST00000361198 PP2D1A8MPX8 630 aa25.55■■□□□ 1.68
LDB1-201ENST00000361198 ASPRV1Q53RT3 343 aa25.55■■□□□ 1.68
LDB1-201ENST00000361198 SOGA3Q5TF21 947 aa25.55■■□□□ 1.68
LDB1-201ENST00000361198 SYT10Q6XYQ8 523 aa25.55■■□□□ 1.68
LDB1-201ENST00000361198 ZDHHC15Q96MV8 337 aa25.55■■□□□ 1.68
LDB1-201ENST00000361198 MYO3BQ8WXR4 1341 aa25.55■■□□□ 1.68
LDB1-201ENST00000361198 PPP1R3GB7ZBB8 358 aa25.54■■□□□ 1.68
LDB1-201ENST00000361198 HLA-DOAP06340 250 aa25.54■■□□□ 1.68
LDB1-201ENST00000361198 CHRNA5P30532 468 aa25.54■■□□□ 1.68
LDB1-201ENST00000361198 STX17P56962 302 aa25.54■■□□□ 1.68
LDB1-201ENST00000361198 ETF1P62495 437 aaKnown RBP25.54■■□□□ 1.68
LDB1-201ENST00000361198 NONOQ15233 471 aaKnown RBP eCLIP25.54■■□□□ 1.68
LDB1-201ENST00000361198 STYK1Q6J9G0 422 aa25.54■■□□□ 1.68
LDB1-201ENST00000361198 DISC1Q9NRI5 854 aa25.54■■□□□ 1.68
LDB1-201ENST00000361198 GTPBP6O43824 516 aaPredicted RBP25.54■■□□□ 1.68
LDB1-201ENST00000361198 RXRBP28702 533 aa25.54■■□□□ 1.68
LDB1-201ENST00000361198 CACNB3P54284 484 aa25.54■■□□□ 1.68
LDB1-201ENST00000361198 LETM2Q2VYF4 491 aa25.54■■□□□ 1.68
LDB1-201ENST00000361198 FCHSD1Q86WN1 690 aa25.54■■□□□ 1.68
LDB1-201ENST00000361198 PKNOX2Q96KN3 472 aa25.54■■□□□ 1.68
LDB1-201ENST00000361198 LAD1O00515 517 aa25.53■■□□□ 1.68
LDB1-201ENST00000361198 KMT5BQ4FZB7 885 aa25.53■■□□□ 1.68
LDB1-201ENST00000361198 DACT2Q5SW24 774 aa25.53■■□□□ 1.68
LDB1-201ENST00000361198 STRIP1Q5VSL9 837 aa25.53■■□□□ 1.68
LDB1-201ENST00000361198 GPCPD1Q9NPB8 672 aa25.53■■□□□ 1.68
LDB1-201ENST00000361198 ECE2O60344 883 aa25.53■■□□□ 1.68
LDB1-201ENST00000361198 CCNT1O60563 726 aaKnown RBP25.53■■□□□ 1.68
LDB1-201ENST00000361198 STAT6P42226 847 aa25.53■■□□□ 1.68
LDB1-201ENST00000361198 NAALADL2Q58DX5 795 aa25.53■■□□□ 1.68
LDB1-201ENST00000361198 BIN2Q9UBW5 565 aaPredicted RBP25.53■■□□□ 1.68
LDB1-201ENST00000361198 TNS1Q9HBL0 1735 aaKnown RBP25.53■■□□□ 1.68
LDB1-201ENST00000361198 SYNRGQ9UMZ2 1314 aa25.52■■□□□ 1.68
LDB1-201ENST00000361198 MPHOSPH10O00566 681 aaKnown RBP25.52■■□□□ 1.68
LDB1-201ENST00000361198 PRPHP41219 470 aa25.52■■□□□ 1.68
LDB1-201ENST00000361198 TBX2Q13207 712 aaPredicted RBP25.52■■□□□ 1.68
LDB1-201ENST00000361198 SPATA1Q5VX52 437 aa25.52■■□□□ 1.68
LDB1-201ENST00000361198 COA7Q96BR5 231 aa25.52■■□□□ 1.68
LDB1-201ENST00000361198 PHLPP2Q6ZVD8 1323 aa25.52■■□□□ 1.68
LDB1-201ENST00000361198 ESYT2A0FGR8 921 aa25.52■■□□□ 1.68
LDB1-201ENST00000361198 ELF2Q15723 593 aa25.52■■□□□ 1.68
LDB1-201ENST00000361198 JAKMIP3Q5VZ66 844 aa25.52■■□□□ 1.68
LDB1-201ENST00000361198 NEK8Q86SG6 692 aa25.52■■□□□ 1.68
LDB1-201ENST00000361198 TMEM139Q8IV31 216 aa25.52■■□□□ 1.68
LDB1-201ENST00000361198 REXO1Q8N1G1 1221 aaKnown RBP25.52■■□□□ 1.68
LDB1-201ENST00000361198 DNAJC18Q9H819 358 aa25.52■■□□□ 1.68
LDB1-201ENST00000361198 GOLGA8FQ08AF8 430 aa25.51■■□□□ 1.67
LDB1-201ENST00000361198 ZNF543Q08ER8 600 aa25.51■■□□□ 1.67
LDB1-201ENST00000361198 GOLGA8DPQ0D2H9 430 aa25.51■■□□□ 1.67
LDB1-201ENST00000361198 TCP10Q12799 353 aa25.51■■□□□ 1.67
LDB1-201ENST00000361198 TRIM65Q6PJ69 517 aa25.51■■□□□ 1.67
LDB1-201ENST00000361198 TBCKQ8TEA7 893 aa25.51■■□□□ 1.67
LDB1-201ENST00000361198 MRIQ9BWK5 157 aa25.51■■□□□ 1.67
LDB1-201ENST00000361198 hCG_1984214I3L0E3 225 aa25.51■■□□□ 1.67
LDB1-201ENST00000361198 UBA7P41226 1012 aa25.51■■□□□ 1.67
LDB1-201ENST00000361198 RBM5P52756 815 aaKnown RBP eCLIP25.51■■□□□ 1.67
LDB1-201ENST00000361198 ZNF713Q8N859 430 aaPredicted RBP25.51■■□□□ 1.67
LDB1-201ENST00000361198 EHD4Q9H223 541 aa25.51■■□□□ 1.67
LDB1-201ENST00000361198 TMEM260Q9NX78 707 aa25.51■■□□□ 1.67
LDB1-201ENST00000361198 NOL12Q9UGY1 213 aaKnown RBP eCLIP25.51■■□□□ 1.67
LDB1-201ENST00000361198 V9GYY5 206 aaPredicted RBP25.51■■□□□ 1.67
LDB1-201ENST00000361198 GREB1LQ9C091 1923 aaPredicted RBP25.5■■□□□ 1.67
LDB1-201ENST00000361198 ATP2B2Q01814 1243 aa25.5■■□□□ 1.67
LDB1-201ENST00000361198 REXO1L1PQ8IX06 675 aa25.5■■□□□ 1.67
LDB1-201ENST00000361198 CCSER1Q9C0I3 900 aa25.5■■□□□ 1.67
LDB1-201ENST00000361198 MYH4Q9Y623 1939 aa25.5■■□□□ 1.67
LDB1-201ENST00000361198 OR52Z1P0C646 297 aa25.49■■□□□ 1.67
LDB1-201ENST00000361198 FKBP1AP62942 108 aaKnown RBP25.49■■□□□ 1.67
LDB1-201ENST00000361198 RRAGBQ5VZM2 374 aa25.49■■□□□ 1.67
LDB1-201ENST00000361198 FBXO38Q6PIJ6 1188 aa25.49■■□□□ 1.67
LDB1-201ENST00000361198 APTXQ7Z2E3 356 aaKnown RBP25.49■■□□□ 1.67
LDB1-201ENST00000361198 RASSF8Q8NHQ8 419 aa25.49■■□□□ 1.67
LDB1-201ENST00000361198 JMJD4Q9H9V9 463 aa25.49■■□□□ 1.67
LDB1-201ENST00000361198 DDTLA6NHG4 134 aaPredicted RBP25.49■■□□□ 1.67
LDB1-201ENST00000361198 FAM196BA6NMK8 535 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms