RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 KRT2P35908 639 aa15.02□□□□□ -0.01
SQSTM1-201ENST00000360718 SLC1A4P43007 532 aa15.02□□□□□ -0.01
SQSTM1-201ENST00000360718 NR5A1Q13285 461 aa15.02□□□□□ -0.01
SQSTM1-201ENST00000360718 STX1AQ16623 288 aa15.02□□□□□ -0.01
SQSTM1-201ENST00000360718 WWC2Q6AWC2 1192 aa15.02□□□□□ -0.01
SQSTM1-201ENST00000360718 HOMER1Q86YM7 354 aa15.02□□□□□ -0.01
SQSTM1-201ENST00000360718 FAM177A1Q8N128 213 aaPredicted RBP15.02□□□□□ -0.01
SQSTM1-201ENST00000360718 SH2D4AQ9H788 454 aa15.02□□□□□ -0.01
SQSTM1-201ENST00000360718 TMX2Q9Y320 296 aa15.02□□□□□ -0.01
SQSTM1-201ENST00000360718 PPP2R3BQ9Y5P8 575 aa15.02□□□□□ -0.01
SQSTM1-201ENST00000360718 WDR90Q96KV7 1748 aa15.02□□□□□ -0.01
SQSTM1-201ENST00000360718 KINO60870 393 aaKnown RBP15.01□□□□□ -0.01
SQSTM1-201ENST00000360718 NLRP5P59047 1200 aa15.01□□□□□ -0.01
SQSTM1-201ENST00000360718 CEBPZQ03701 1054 aaKnown RBP15.01□□□□□ -0.01
SQSTM1-201ENST00000360718 NOSTRINQ8IVI9 506 aa15.01□□□□□ -0.01
SQSTM1-201ENST00000360718 CCDC148Q8NFR7 591 aa15.01□□□□□ -0.01
SQSTM1-201ENST00000360718 CCDC12Q8WUD4 166 aaPredicted RBP15.01□□□□□ -0.01
SQSTM1-201ENST00000360718 ZKSCAN4Q969J2 545 aaPredicted RBP15.01□□□□□ -0.01
SQSTM1-201ENST00000360718 USP28Q96RU2 1077 aa15.01□□□□□ -0.01
SQSTM1-201ENST00000360718 TAF1DQ9H5J8 278 aaPredicted RBP15.01□□□□□ -0.01
SQSTM1-201ENST00000360718 ZNF112Q9UJU3 913 aa15.01□□□□□ -0.01
SQSTM1-201ENST00000360718 CTNND1O60716 968 aaKnown RBP15.01□□□□□ -0.01
SQSTM1-201ENST00000360718 ZYXQ15942 572 aaKnown RBP15.01□□□□□ -0.01
SQSTM1-201ENST00000360718 NOM1Q5C9Z4 860 aaKnown RBP15.01□□□□□ -0.01
SQSTM1-201ENST00000360718 SARM1Q6SZW1 724 aa15.01□□□□□ -0.01
SQSTM1-201ENST00000360718 USP50Q70EL3 339 aaPredicted RBP15.01□□□□□ -0.01
SQSTM1-201ENST00000360718 HEATR3Q7Z4Q2 680 aa15.01□□□□□ -0.01
SQSTM1-201ENST00000360718 ADGRF4Q8IZF3 695 aa15.01□□□□□ -0.01
SQSTM1-201ENST00000360718 DCPSQ96C86 337 aaKnown RBP15.01□□□□□ -0.01
SQSTM1-201ENST00000360718 ZNF341Q9BYN7 854 aa15.01□□□□□ -0.01
SQSTM1-201ENST00000360718 JMJD4Q9H9V9 463 aa15.01□□□□□ -0.01
SQSTM1-201ENST00000360718 GINM1Q9NU53 330 aa15.01□□□□□ -0.01
SQSTM1-201ENST00000360718 NEMFO60524 1076 aa15□□□□□ -0.01
SQSTM1-201ENST00000360718 POTEIP0CG38 1075 aa15□□□□□ -0.01
SQSTM1-201ENST00000360718 POTEJP0CG39 1038 aa15□□□□□ -0.01
SQSTM1-201ENST00000360718 DGKZQ13574 1117 aa15□□□□□ -0.01
SQSTM1-201ENST00000360718 PRKG1Q13976 671 aa15□□□□□ -0.01
SQSTM1-201ENST00000360718 EARS2Q5JPH6 523 aaKnown RBP15□□□□□ -0.01
SQSTM1-201ENST00000360718 GMCL1Q96IK5 515 aa15□□□□□ -0.01
SQSTM1-201ENST00000360718 WRNIP1Q96S55 665 aa15□□□□□ -0.01
SQSTM1-201ENST00000360718 GOPCQ9HD26 462 aa15□□□□□ -0.01
SQSTM1-201ENST00000360718 ANO10Q9NW15 660 aa15□□□□□ -0.01
SQSTM1-201ENST00000360718 FAM205CA6NFA0 338 aa15□□□□□ -0.01
SQSTM1-201ENST00000360718 USP17L10C9JJH3 530 aa15□□□□□ -0.01
SQSTM1-201ENST00000360718 STXBP3O00186 592 aa15□□□□□ -0.01
SQSTM1-201ENST00000360718 PPP1R11O60927 126 aaPredicted RBP15□□□□□ -0.01
SQSTM1-201ENST00000360718 FAM160A1Q05DH4 1040 aa15□□□□□ -0.01
SQSTM1-201ENST00000360718 KRT26Q7Z3Y9 468 aa15□□□□□ -0.01
SQSTM1-201ENST00000360718 KLRG1Q96E93 195 aa15□□□□□ -0.01
SQSTM1-201ENST00000360718 RTEL1Q9NZ71 1219 aa15□□□□□ -0.01
SQSTM1-201ENST00000360718 PHIPQ8WWQ0 1821 aa15□□□□□ -0.01
SQSTM1-201ENST00000360718 PAPPA2Q9BXP8 1791 aa15□□□□□ -0.01
SQSTM1-201ENST00000360718 BECN2A8MW95 431 aa14.99□□□□□ -0.01
SQSTM1-201ENST00000360718 hCG_1984214I3L0E3 225 aa14.99□□□□□ -0.01
SQSTM1-201ENST00000360718 STK38Q15208 465 aa14.99□□□□□ -0.01
SQSTM1-201ENST00000360718 GALNT17Q6IS24 598 aa14.99□□□□□ -0.01
SQSTM1-201ENST00000360718 SULF1Q8IWU6 871 aa14.99□□□□□ -0.01
SQSTM1-201ENST00000360718 ZNF713Q8N859 430 aaPredicted RBP14.99□□□□□ -0.01
SQSTM1-201ENST00000360718 NAT10Q9H0A0 1025 aaKnown RBP14.99□□□□□ -0.01
SQSTM1-201ENST00000360718 POLR3EQ9NVU0 708 aa14.99□□□□□ -0.01
SQSTM1-201ENST00000360718 BARHL2Q9NY43 387 aa14.99□□□□□ -0.01
SQSTM1-201ENST00000360718 OTOFQ9HC10 1997 aa14.99□□□□□ -0.01
SQSTM1-201ENST00000360718 USP2O75604 605 aaPredicted RBP14.99□□□□□ -0.01
SQSTM1-201ENST00000360718 ME1P48163 572 aa14.99□□□□□ -0.01
SQSTM1-201ENST00000360718 IQCB1Q15051 598 aa14.99□□□□□ -0.01
SQSTM1-201ENST00000360718 SF3A1Q15459 793 aaKnown RBP14.99□□□□□ -0.01
SQSTM1-201ENST00000360718 SUPT20HL1Q3ZLR7 823 aa14.99□□□□□ -0.01
SQSTM1-201ENST00000360718 EAPPQ56P03 285 aaPredicted RBP14.99□□□□□ -0.01
SQSTM1-201ENST00000360718 RILPL1Q5EBL4 403 aa14.99□□□□□ -0.01
SQSTM1-201ENST00000360718 TNFRSF25Q93038 417 aa14.99□□□□□ -0.01
SQSTM1-201ENST00000360718 MTMR8Q96EF0 704 aa14.99□□□□□ -0.01
SQSTM1-201ENST00000360718 MRFAP1L1Q96HT8 127 aa14.99□□□□□ -0.01
SQSTM1-201ENST00000360718 CLIC4Q9Y696 253 aa14.99□□□□□ -0.01
SQSTM1-201ENST00000360718 YEATS4O95619 227 aa14.98□□□□□ -0.01
SQSTM1-201ENST00000360718 ANO1Q5XXA6 986 aa14.98□□□□□ -0.01
SQSTM1-201ENST00000360718 SCYL3Q8IZE3 742 aa14.98□□□□□ -0.01
SQSTM1-201ENST00000360718 CCDC94Q9BW85 323 aaPredicted RBP14.98□□□□□ -0.01
SQSTM1-201ENST00000360718 VCPKMTQ9H867 229 aa14.98□□□□□ -0.01
SQSTM1-201ENST00000360718 SMCHD1A6NHR9 2005 aa14.98□□□□□ -0.01
SQSTM1-201ENST00000360718 BMP3P12645 472 aa14.97□□□□□ -0.01
SQSTM1-201ENST00000360718 TOB1P50616 345 aaPredicted RBP14.97□□□□□ -0.01
SQSTM1-201ENST00000360718 NAPAP54920 295 aa14.97□□□□□ -0.01
SQSTM1-201ENST00000360718 SNAP25P60880 206 aa14.97□□□□□ -0.01
SQSTM1-201ENST00000360718 IKQ13123 557 aaPredicted RBP14.97□□□□□ -0.01
SQSTM1-201ENST00000360718 FAM83BQ5T0W9 1011 aa14.97□□□□□ -0.01
SQSTM1-201ENST00000360718 KCNG4Q8TDN1 519 aa14.97□□□□□ -0.01
SQSTM1-201ENST00000360718 PNMA6FA0A0J9YX94 578 aa14.97□□□□□ -0.01
SQSTM1-201ENST00000360718 TMEM232C9JQI7 657 aa14.97□□□□□ -0.01
SQSTM1-201ENST00000360718 SNW1Q13573 536 aaKnown RBP14.97□□□□□ -0.01
SQSTM1-201ENST00000360718 BLIDQ8IZY5 108 aa14.97□□□□□ -0.01
SQSTM1-201ENST00000360718 FSIP1Q8NA03 581 aa14.97□□□□□ -0.01
SQSTM1-201ENST00000360718 ENGASEQ8NFI3 743 aa14.97□□□□□ -0.01
SQSTM1-201ENST00000360718 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.97□□□□□ -0.013e-24■■□□□ 13.5
SQSTM1-201ENST00000360718 ZC3H15Q8WU90 426 aaKnown RBP14.97□□□□□ -0.01
SQSTM1-201ENST00000360718 COA7Q96BR5 231 aa14.97□□□□□ -0.01
SQSTM1-201ENST00000360718 PCDHA4Q9UN74 947 aa14.97□□□□□ -0.01
SQSTM1-201ENST00000360718 A0A1W2PQ27 194 aa14.96□□□□□ -0.01
SQSTM1-201ENST00000360718 A0A1W2PQ64 194 aa14.96□□□□□ -0.01
SQSTM1-201ENST00000360718 A0A1W2PQD8 194 aa14.96□□□□□ -0.01
SQSTM1-201ENST00000360718 IQCA1LA6NCM1 817 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms