RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 HIPK3Q9H422 1215 aa7.32□□□□□ -1.24
CDC42SE2-201ENST00000360515 POLR3EQ9NVU0 708 aa7.32□□□□□ -1.24
CDC42SE2-201ENST00000360515 NYAP2Q9P242 653 aa7.32□□□□□ -1.24
CDC42SE2-201ENST00000360515 PATJQ8NI35 1801 aa7.32□□□□□ -1.24
CDC42SE2-201ENST00000360515 ZEB2O60315 1214 aa7.32□□□□□ -1.24
CDC42SE2-201ENST00000360515 PQBP1O60828 265 aaKnown RBP7.32□□□□□ -1.24
CDC42SE2-201ENST00000360515 LINC00271P0C7V0 271 aa7.32□□□□□ -1.24
CDC42SE2-201ENST00000360515 TFF2Q03403 129 aa7.32□□□□□ -1.24
CDC42SE2-201ENST00000360515 TIGD5Q53EQ6 642 aa7.32□□□□□ -1.24
CDC42SE2-201ENST00000360515 EMID1Q96A84 441 aaPredicted RBP7.32□□□□□ -1.24
CDC42SE2-201ENST00000360515 CTAGE1Q96RT6 745 aa7.32□□□□□ -1.24
CDC42SE2-201ENST00000360515 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.32□□□□□ -1.24
CDC42SE2-201ENST00000360515 SBK1Q52WX2 424 aa7.31□□□□□ -1.24
CDC42SE2-201ENST00000360515 GIMAP6Q6P9H5 292 aa7.31□□□□□ -1.24
CDC42SE2-201ENST00000360515 AFAP1L1Q8TED9 768 aa7.31□□□□□ -1.24
CDC42SE2-201ENST00000360515 NOL10Q9BSC4 688 aaKnown RBP7.31□□□□□ -1.24
CDC42SE2-201ENST00000360515 PCGF6Q9BYE7 350 aa7.31□□□□□ -1.24
CDC42SE2-201ENST00000360515 SLC38A10Q9HBR0 1119 aa7.31□□□□□ -1.24
CDC42SE2-201ENST00000360515 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.31□□□□□ -1.24
CDC42SE2-201ENST00000360515 FSD2A1L4K1 749 aa7.31□□□□□ -1.24
CDC42SE2-201ENST00000360515 B4GALT4O60513 344 aa7.31□□□□□ -1.24
CDC42SE2-201ENST00000360515 EDNRBP24530 442 aa7.31□□□□□ -1.24
CDC42SE2-201ENST00000360515 GHRHRQ02643 423 aa7.31□□□□□ -1.24
CDC42SE2-201ENST00000360515 SSH3Q8TE77 659 aa7.31□□□□□ -1.24
CDC42SE2-201ENST00000360515 TEX13BQ9BXU2 312 aa7.31□□□□□ -1.24
CDC42SE2-201ENST00000360515 ALDH8A1Q9H2A2 487 aaPredicted RBP7.31□□□□□ -1.24
CDC42SE2-201ENST00000360515 CABP5Q9NP86 173 aa7.31□□□□□ -1.24
CDC42SE2-201ENST00000360515 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.31□□□□□ -1.24
CDC42SE2-201ENST00000360515 CNPY2Q9Y2B0 182 aa7.31□□□□□ -1.24
CDC42SE2-201ENST00000360515 ABHD14A-ACY1A0A1B0GW23 586 aa7.31□□□□□ -1.24
CDC42SE2-201ENST00000360515 CNGA1P29973 690 aa7.31□□□□□ -1.24
CDC42SE2-201ENST00000360515 TFCP2Q12800 502 aa7.31□□□□□ -1.24
CDC42SE2-201ENST00000360515 TRIM71Q2Q1W2 868 aaKnown RBP7.31□□□□□ -1.24
CDC42SE2-201ENST00000360515 RCSD1Q6JBY9 416 aa7.31□□□□□ -1.24
CDC42SE2-201ENST00000360515 TGFBRAP1Q8WUH2 860 aa7.31□□□□□ -1.24
CDC42SE2-201ENST00000360515 RC3H2Q9HBD1 1191 aaKnown RBP7.31□□□□□ -1.24
CDC42SE2-201ENST00000360515 EYSQ5T1H1 3165 aa7.31□□□□□ -1.24
CDC42SE2-201ENST00000360515 GDF11O95390 407 aa7.3□□□□□ -1.24
CDC42SE2-201ENST00000360515 PGK1P00558 417 aa7.3□□□□□ -1.24
CDC42SE2-201ENST00000360515 GNAI3P08754 354 aa7.3□□□□□ -1.24
CDC42SE2-201ENST00000360515 STAT3P40763 770 aa7.3□□□□□ -1.24
CDC42SE2-201ENST00000360515 COASYQ13057 564 aa7.3□□□□□ -1.24
CDC42SE2-201ENST00000360515 ITGA7Q13683 1181 aa7.3□□□□□ -1.24
CDC42SE2-201ENST00000360515 CNKSR3Q6P9H4 555 aa7.3□□□□□ -1.24
CDC42SE2-201ENST00000360515 CCAR1Q8IX12 1150 aaKnown RBP7.3□□□□□ -1.24
CDC42SE2-201ENST00000360515 SPC25Q9HBM1 224 aa7.3□□□□□ -1.24
CDC42SE2-201ENST00000360515 ARHGEF10LQ9HCE6 1279 aa7.3□□□□□ -1.24
CDC42SE2-201ENST00000360515 ASB14A6NK59 587 aa7.3□□□□□ -1.24
CDC42SE2-201ENST00000360515 ARHGEF15O94989 841 aa7.3□□□□□ -1.24
CDC42SE2-201ENST00000360515 IQCF3P0C7M6 154 aa7.3□□□□□ -1.24
CDC42SE2-201ENST00000360515 UBTFL1P0CB47 393 aaPredicted RBP7.3□□□□□ -1.24
CDC42SE2-201ENST00000360515 KCTD2Q14681 263 aa7.3□□□□□ -1.24
CDC42SE2-201ENST00000360515 NAALADL2Q58DX5 795 aa7.3□□□□□ -1.24
CDC42SE2-201ENST00000360515 PRAMEF19Q5SWL8 479 aa7.3□□□□□ -1.24
CDC42SE2-201ENST00000360515 RGS22Q8NE09 1264 aa7.3□□□□□ -1.24
CDC42SE2-201ENST00000360515 ATG4CQ96DT6 458 aa7.3□□□□□ -1.24
CDC42SE2-201ENST00000360515 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.3□□□□□ -1.24
CDC42SE2-201ENST00000360515 API5Q9BZZ5 524 aaKnown RBP7.3□□□□□ -1.24
CDC42SE2-201ENST00000360515 ATP8A2Q9NTI2 1148 aa7.3□□□□□ -1.24
CDC42SE2-201ENST00000360515 PNMA2Q9UL42 364 aa7.3□□□□□ -1.24
CDC42SE2-201ENST00000360515 PALD1Q9ULE6 856 aa7.3□□□□□ -1.24
CDC42SE2-201ENST00000360515 ASIC4Q96FT7 647 aa7.3□□□□□ -1.24
CDC42SE2-201ENST00000360515 MSLNLQ96KJ4 702 aa7.3□□□□□ -1.24
CDC42SE2-201ENST00000360515 H3BNC9 293 aa7.29□□□□□ -1.24
CDC42SE2-201ENST00000360515 ATF7P17544 494 aaPredicted RBP7.29□□□□□ -1.24
CDC42SE2-201ENST00000360515 PURAQ00577 322 aaKnown RBP7.29□□□□□ -1.24
CDC42SE2-201ENST00000360515 SMAD4Q13485 552 aaKnown RBP7.29□□□□□ -1.24
CDC42SE2-201ENST00000360515 TTLL4Q14679 1199 aa7.29□□□□□ -1.24
CDC42SE2-201ENST00000360515 CRACR2BQ8N4Y2 399 aaPredicted RBP7.29□□□□□ -1.24
CDC42SE2-201ENST00000360515 TGS1Q96RS0 853 aaKnown RBP7.29□□□□□ -1.24
CDC42SE2-201ENST00000360515 RAD9AQ99638 391 aa7.29□□□□□ -1.24
CDC42SE2-201ENST00000360515 PIH1D3Q9NQM4 214 aaKnown RBP7.29□□□□□ -1.24
CDC42SE2-201ENST00000360515 PLXNA4Q9HCM2 1894 aa7.29□□□□□ -1.24
CDC42SE2-201ENST00000360515 A6NJR5 290 aa7.29□□□□□ -1.24
CDC42SE2-201ENST00000360515 E9PSI1 815 aa7.29□□□□□ -1.24
CDC42SE2-201ENST00000360515 RB1P06400 928 aa7.29□□□□□ -1.24
CDC42SE2-201ENST00000360515 TIMM10P62072 90 aa7.29□□□□□ -1.24
CDC42SE2-201ENST00000360515 CCDC144BQ3MJ40 725 aa7.29□□□□□ -1.24
CDC42SE2-201ENST00000360515 TNNI3KQ59H18 835 aa7.29□□□□□ -1.24
CDC42SE2-201ENST00000360515 TMEM184AQ6ZMB5 413 aa7.29□□□□□ -1.24
CDC42SE2-201ENST00000360515 CCDC155Q8N6L0 562 aa7.29□□□□□ -1.24
CDC42SE2-201ENST00000360515 SSH1Q8WYL5 1049 aa7.29□□□□□ -1.24
CDC42SE2-201ENST00000360515 KANSL2Q9H9L4 492 aa7.29□□□□□ -1.24
CDC42SE2-201ENST00000360515 FPGT-TNNI3KV9GXZ4 949 aa7.29□□□□□ -1.24
CDC42SE2-201ENST00000360515 CYP2C18P33260 490 aa7.29□□□□□ -1.24
CDC42SE2-201ENST00000360515 WDR5P61964 334 aaKnown RBP7.29□□□□□ -1.24
CDC42SE2-201ENST00000360515 SLFN5Q08AF3 891 aa7.29□□□□□ -1.24
CDC42SE2-201ENST00000360515 DUSP28Q4G0W2 176 aa7.29□□□□□ -1.24
CDC42SE2-201ENST00000360515 RPAINQ86UA6 219 aa7.29□□□□□ -1.24
CDC42SE2-201ENST00000360515 MAPKAPK5Q8IW41 473 aa7.29□□□□□ -1.24
CDC42SE2-201ENST00000360515 FERMT2Q96AC1 680 aa7.29□□□□□ -1.24
CDC42SE2-201ENST00000360515 GOPCQ9HD26 462 aa7.29□□□□□ -1.24
CDC42SE2-201ENST00000360515 AATFQ9NY61 560 aaKnown RBP eCLIP7.29□□□□□ -1.24
CDC42SE2-201ENST00000360515 CHD7Q9P2D1 2997 aa7.29□□□□□ -1.24
CDC42SE2-201ENST00000360515 HAS3O00219 553 aa7.28□□□□□ -1.24
CDC42SE2-201ENST00000360515 CA3P07451 260 aa7.28□□□□□ -1.24
CDC42SE2-201ENST00000360515 SEPT2Q15019 361 aa7.28□□□□□ -1.24
CDC42SE2-201ENST00000360515 FAM26DQ5JW98 314 aa7.28□□□□□ -1.24
CDC42SE2-201ENST00000360515 C12orf60Q5U649 245 aa7.28□□□□□ -1.24
CDC42SE2-201ENST00000360515 ARMCX2Q7L311 632 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms