RNA–Protein interactions for RNA: ENST00000360286.2

SUDS3-201, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 510 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-201ENST00000360286 ALDH8A1Q9H2A2 487 aaPredicted RBP7.48□□□□□ -1.21
SUDS3-201ENST00000360286 RANBP17Q9H2T7 1088 aaKnown RBP7.48□□□□□ -1.21
SUDS3-201ENST00000360286 JMJD4Q9H9V9 463 aa7.48□□□□□ -1.21
SUDS3-201ENST00000360286 UPF2Q9HAU5 1272 aaKnown RBP7.48□□□□□ -1.21
SUDS3-201ENST00000360286 FAM217BQ9NTX9 383 aaPredicted RBP7.48□□□□□ -1.21
SUDS3-201ENST00000360286 ZNF214Q9UL59 606 aaPredicted RBP7.48□□□□□ -1.21
SUDS3-201ENST00000360286 HPS5Q9UPZ3 1129 aa7.48□□□□□ -1.21
SUDS3-201ENST00000360286 CTDP1Q9Y5B0 961 aaPredicted RBP7.48□□□□□ -1.21
SUDS3-201ENST00000360286 ZNFX1Q9P2E3 1918 aaKnown RBP7.48□□□□□ -1.21
SUDS3-201ENST00000360286 ZNF536O15090 1300 aa7.48□□□□□ -1.21
SUDS3-201ENST00000360286 MGAMO43451 1857 aa7.47□□□□□ -1.21
SUDS3-201ENST00000360286 hCG_1642624A0A1W2PR95 340 aa7.47□□□□□ -1.21
SUDS3-201ENST00000360286 GOLGA8AA7E2F4 631 aa7.47□□□□□ -1.21
SUDS3-201ENST00000360286 GOLGA8BA8MQT2 603 aa7.47□□□□□ -1.21
SUDS3-201ENST00000360286 DHX16O60231 1041 aaKnown RBP7.47□□□□□ -1.21
SUDS3-201ENST00000360286 DTNBO60941 627 aa7.47□□□□□ -1.21
SUDS3-201ENST00000360286 CALM1P0DP23 149 aa7.47□□□□□ -1.21
SUDS3-201ENST00000360286 CALM2P0DP24 149 aa7.47□□□□□ -1.21
SUDS3-201ENST00000360286 CALM3P0DP25 149 aa7.47□□□□□ -1.21
SUDS3-201ENST00000360286 FDX1P10109 184 aa7.47□□□□□ -1.21
SUDS3-201ENST00000360286 ERCC3P19447 782 aa7.47□□□□□ -1.21
SUDS3-201ENST00000360286 KIF5BP33176 963 aa7.47□□□□□ -1.21
SUDS3-201ENST00000360286 DEKP35659 375 aaKnown RBP7.47□□□□□ -1.21
SUDS3-201ENST00000360286 EVCP57679 992 aa7.47□□□□□ -1.21
SUDS3-201ENST00000360286 KIF22Q14807 665 aa7.47□□□□□ -1.21
SUDS3-201ENST00000360286 RTN1Q16799 776 aa7.47□□□□□ -1.21
SUDS3-201ENST00000360286 WDR78Q5VTH9 848 aa7.47□□□□□ -1.21
SUDS3-201ENST00000360286 SNRNP48Q6IEG0 339 aaKnown RBP7.47□□□□□ -1.21
SUDS3-201ENST00000360286 NCAPG2Q86XI2 1143 aa7.47□□□□□ -1.21
SUDS3-201ENST00000360286 RIOX2Q8IUF8 465 aa7.47□□□□□ -1.21
SUDS3-201ENST00000360286 CCAR1Q8IX12 1150 aaKnown RBP7.47□□□□□ -1.21
SUDS3-201ENST00000360286 MB21D1Q8N884 522 aa7.47□□□□□ -1.21
SUDS3-201ENST00000360286 PIGSQ96S52 555 aa7.47□□□□□ -1.21
SUDS3-201ENST00000360286 RIOX1Q9H6W3 641 aa7.47□□□□□ -1.21
SUDS3-201ENST00000360286 NCOA5Q9HCD5 579 aaKnown RBP7.47□□□□□ -1.21
SUDS3-201ENST00000360286 PRDM10Q9NQV6 1147 aa7.47□□□□□ -1.21
SUDS3-201ENST00000360286 TPCN1Q9ULQ1 816 aa7.47□□□□□ -1.21
SUDS3-201ENST00000360286 GABRQQ9UN88 632 aa7.47□□□□□ -1.21
SUDS3-201ENST00000360286 TRIM17Q9Y577 477 aa7.47□□□□□ -1.21
SUDS3-201ENST00000360286 MYH6P13533 1939 aa7.46□□□□□ -1.21
SUDS3-201ENST00000360286 TNPO2O14787 897 aaKnown RBP7.46□□□□□ -1.22
SUDS3-201ENST00000360286 ATP2A1O14983 1001 aa7.46□□□□□ -1.22
SUDS3-201ENST00000360286 PPP1R11O60927 126 aaPredicted RBP7.46□□□□□ -1.22
SUDS3-201ENST00000360286 PPFIA3O75145 1194 aa7.46□□□□□ -1.22
SUDS3-201ENST00000360286 LARGE1O95461 756 aa7.46□□□□□ -1.22
SUDS3-201ENST00000360286 ALAS1P13196 640 aa7.46□□□□□ -1.22
SUDS3-201ENST00000360286 PTPREP23469 700 aa7.46□□□□□ -1.22
SUDS3-201ENST00000360286 MAPK4P31152 587 aa7.46□□□□□ -1.22
SUDS3-201ENST00000360286 GNAQP50148 359 aa7.46□□□□□ -1.22
SUDS3-201ENST00000360286 METAP2P50579 478 aaKnown RBP eCLIP7.46□□□□□ -1.22
SUDS3-201ENST00000360286 OAZ1P54368 228 aa7.46□□□□□ -1.22
SUDS3-201ENST00000360286 FCGRTP55899 365 aa7.46□□□□□ -1.22
SUDS3-201ENST00000360286 CCNA1P78396 465 aa7.46□□□□□ -1.22
SUDS3-201ENST00000360286 CDC37Q16543 378 aaPredicted RBP7.46□□□□□ -1.22
SUDS3-201ENST00000360286 QRICH1Q2TAL8 776 aa7.46□□□□□ -1.22
SUDS3-201ENST00000360286 USH1GQ495M9 461 aa7.46□□□□□ -1.22
SUDS3-201ENST00000360286 MUM1L1Q5H9M0 696 aa7.46□□□□□ -1.22
SUDS3-201ENST00000360286 TMTC3Q6ZXV5 915 aa7.46□□□□□ -1.22
SUDS3-201ENST00000360286 OTOP1Q7RTM1 612 aa7.46□□□□□ -1.22
SUDS3-201ENST00000360286 GPR142Q7Z601 462 aa7.46□□□□□ -1.22
SUDS3-201ENST00000360286 PLEKHH3Q7Z736 793 aa7.46□□□□□ -1.22
SUDS3-201ENST00000360286 HOMER1Q86YM7 354 aa7.46□□□□□ -1.22
SUDS3-201ENST00000360286 NECAB1Q8N987 351 aa7.46□□□□□ -1.22
SUDS3-201ENST00000360286 TBC1D5Q92609 795 aa7.46□□□□□ -1.22
SUDS3-201ENST00000360286 MTMR8Q96EF0 704 aa7.46□□□□□ -1.22
SUDS3-201ENST00000360286 ZNF274Q96GC6 653 aaPredicted RBP7.46□□□□□ -1.22
SUDS3-201ENST00000360286 TRERF1Q96PN7 1200 aa7.46□□□□□ -1.22
SUDS3-201ENST00000360286 TEX13BQ9BXU2 312 aa7.46□□□□□ -1.22
SUDS3-201ENST00000360286 CWC22Q9HCG8 908 aaKnown RBP7.46□□□□□ -1.22
SUDS3-201ENST00000360286 HOMER2Q9NSB8 354 aa7.46□□□□□ -1.22
SUDS3-201ENST00000360286 RBM28Q9NW13 759 aaKnown RBP7.46□□□□□ -1.22
SUDS3-201ENST00000360286 GJD2Q9UKL4 321 aa7.46□□□□□ -1.22
SUDS3-201ENST00000360286 CCPG1Q9ULG6 757 aa7.46□□□□□ -1.22
SUDS3-201ENST00000360286 A0A0G2JMZ2 1700 aa7.46□□□□□ -1.22
SUDS3-201ENST00000360286 PNMA6FA0A0J9YX94 578 aa7.45□□□□□ -1.22
SUDS3-201ENST00000360286 ZBTB5O15062 677 aa7.45□□□□□ -1.22
SUDS3-201ENST00000360286 SLC25A27O95847 323 aa7.45□□□□□ -1.22
SUDS3-201ENST00000360286 ICAM1P05362 532 aa7.45□□□□□ -1.22
SUDS3-201ENST00000360286 CYP2B6P20813 491 aa7.45□□□□□ -1.22
SUDS3-201ENST00000360286 SMARCA1P28370 1054 aa7.45□□□□□ -1.22
SUDS3-201ENST00000360286 PRKCZQ05513 592 aa7.45□□□□□ -1.22
SUDS3-201ENST00000360286 FUT2Q10981 343 aa7.45□□□□□ -1.22
SUDS3-201ENST00000360286 SCRN1Q12765 414 aa7.45□□□□□ -1.22
SUDS3-201ENST00000360286 RABEP1Q15276 862 aa7.45□□□□□ -1.22
SUDS3-201ENST00000360286 ANKRD1Q15327 319 aa7.45□□□□□ -1.22
SUDS3-201ENST00000360286 NTRK3Q16288 839 aa7.45□□□□□ -1.22
SUDS3-201ENST00000360286 ME3Q16798 604 aa7.45□□□□□ -1.22
SUDS3-201ENST00000360286 COL13A1Q5TAT6 717 aaPredicted RBP7.45□□□□□ -1.22
SUDS3-201ENST00000360286 CTU1Q7Z7A3 348 aaKnown RBP7.45□□□□□ -1.22
SUDS3-201ENST00000360286 FBXO11Q86XK2 927 aa7.45□□□□□ -1.22
SUDS3-201ENST00000360286 SHCBP1Q8NEM2 672 aa7.45□□□□□ -1.22
SUDS3-201ENST00000360286 PHKBQ93100 1093 aa7.45□□□□□ -1.22
SUDS3-201ENST00000360286 COA7Q96BR5 231 aa7.45□□□□□ -1.22
SUDS3-201ENST00000360286 LZTS2Q9BRK4 669 aa7.45□□□□□ -1.22
SUDS3-201ENST00000360286 SPZ1Q9BXG8 430 aa7.45□□□□□ -1.22
SUDS3-201ENST00000360286 MROH8Q9H579 483 aa7.45□□□□□ -1.22
SUDS3-201ENST00000360286 RNF146Q9NTX7 359 aa7.45□□□□□ -1.22
SUDS3-201ENST00000360286 V9GY48 417 aaPredicted RBP7.45□□□□□ -1.22
SUDS3-201ENST00000360286 PLXNB2O15031 1838 aa7.45□□□□□ -1.22
SUDS3-201ENST00000360286 PFKFB2O60825 505 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms