RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 ELF1P32519 619 aa16.66■□□□□ 0.26
UBAP1-202ENST00000359544 AFMP43652 599 aa16.66■□□□□ 0.26
UBAP1-202ENST00000359544 ITIH3Q06033 890 aa16.66■□□□□ 0.26
UBAP1-202ENST00000359544 DPYDQ12882 1025 aa16.66■□□□□ 0.26
UBAP1-202ENST00000359544 PREPLQ4J6C6 727 aaPredicted RBP16.66■□□□□ 0.26
UBAP1-202ENST00000359544 EMBQ6PCB8 327 aa16.66■□□□□ 0.26
UBAP1-202ENST00000359544 CYB5R4Q7L1T6 521 aa16.66■□□□□ 0.26
UBAP1-202ENST00000359544 RNF225M0QZC1 329 aaPredicted RBP16.66■□□□□ 0.26
UBAP1-202ENST00000359544 EYA2O00167 538 aa16.66■□□□□ 0.26
UBAP1-202ENST00000359544 GPAA1O43292 621 aa16.66■□□□□ 0.26
UBAP1-202ENST00000359544 NF2P35240 595 aa16.66■□□□□ 0.26
UBAP1-202ENST00000359544 SATB1Q01826 763 aa16.66■□□□□ 0.26
UBAP1-202ENST00000359544 TTF1Q15361 905 aaPredicted RBP16.66■□□□□ 0.26
UBAP1-202ENST00000359544 SGMS1Q86VZ5 419 aa16.66■□□□□ 0.26
UBAP1-202ENST00000359544 ZKSCAN4Q969J2 545 aaPredicted RBP16.66■□□□□ 0.26
UBAP1-202ENST00000359544 SETDB2Q96T68 719 aa16.66■□□□□ 0.26
UBAP1-202ENST00000359544 RWDD2AQ9UIY3 292 aa16.66■□□□□ 0.26
UBAP1-202ENST00000359544 PCDHB6Q9Y5E3 794 aa16.66■□□□□ 0.26
UBAP1-202ENST00000359544 HERVK_113P62684 666 aa16.65■□□□□ 0.26
UBAP1-202ENST00000359544 FOXO4P98177 505 aa16.65■□□□□ 0.26
UBAP1-202ENST00000359544 C2orf54Q08AI8 447 aa16.65■□□□□ 0.26
UBAP1-202ENST00000359544 TCP11X2Q5H9J9 407 aa16.65■□□□□ 0.26
UBAP1-202ENST00000359544 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.65■□□□□ 0.26
UBAP1-202ENST00000359544 TRIM22Q8IYM9 498 aa16.65■□□□□ 0.26
UBAP1-202ENST00000359544 TAB2Q9NYJ8 693 aa16.65■□□□□ 0.26
UBAP1-202ENST00000359544 GGA2Q9UJY4 613 aa16.65■□□□□ 0.26
UBAP1-202ENST00000359544 ARFGEF2Q9Y6D5 1785 aa16.65■□□□□ 0.26
UBAP1-202ENST00000359544 CIAO1O76071 339 aa16.65■□□□□ 0.26
UBAP1-202ENST00000359544 IPO7O95373 1038 aaKnown RBP16.65■□□□□ 0.26
UBAP1-202ENST00000359544 IFNAR1P17181 557 aa16.65■□□□□ 0.26
UBAP1-202ENST00000359544 CYLC1P35663 651 aaPredicted RBP16.65■□□□□ 0.26
UBAP1-202ENST00000359544 SMTNP53814 917 aa16.65■□□□□ 0.26
UBAP1-202ENST00000359544 APBA1Q02410 837 aa16.65■□□□□ 0.26
UBAP1-202ENST00000359544 DNAJC7Q99615 494 aa16.65■□□□□ 0.26
UBAP1-202ENST00000359544 PUS7LQ9H0K6 701 aaKnown RBP16.65■□□□□ 0.26
UBAP1-202ENST00000359544 LUC7L2Q9Y383 392 aaKnown RBP16.65■□□□□ 0.26
UBAP1-202ENST00000359544 ABCC12Q96J65 1359 aa16.65■□□□□ 0.26
UBAP1-202ENST00000359544 KCNJ18B7U540 433 aa16.64■□□□□ 0.25
UBAP1-202ENST00000359544 UBXN1Q04323 297 aa16.64■□□□□ 0.25
UBAP1-202ENST00000359544 PDCLQ13371 301 aa16.64■□□□□ 0.25
UBAP1-202ENST00000359544 DRP2Q13474 957 aa16.64■□□□□ 0.25
UBAP1-202ENST00000359544 KCNJ12Q14500 433 aa16.64■□□□□ 0.25
UBAP1-202ENST00000359544 ZNF572Q7Z3I7 529 aaPredicted RBP16.64■□□□□ 0.25
UBAP1-202ENST00000359544 EPN3Q9H201 632 aa16.64■□□□□ 0.25
UBAP1-202ENST00000359544 VCPKMTQ9H867 229 aa16.64■□□□□ 0.25
UBAP1-202ENST00000359544 KLC4Q9NSK0 619 aa16.64■□□□□ 0.25
UBAP1-202ENST00000359544 FAM217BQ9NTX9 383 aaPredicted RBP16.64■□□□□ 0.25
UBAP1-202ENST00000359544 SCN7AQ01118 1682 aa16.64■□□□□ 0.25
UBAP1-202ENST00000359544 ATP5J2-PTCD1G3V325 749 aa16.64■□□□□ 0.25
UBAP1-202ENST00000359544 IDEP14735 1019 aa16.64■□□□□ 0.25
UBAP1-202ENST00000359544 NAP1L1P55209 391 aaKnown RBP16.64■□□□□ 0.25
UBAP1-202ENST00000359544 NNTQ13423 1086 aa16.64■□□□□ 0.25
UBAP1-202ENST00000359544 TTMPQ5BVD1 217 aa16.64■□□□□ 0.25
UBAP1-202ENST00000359544 TTC19Q6DKK2 380 aaPredicted RBP16.64■□□□□ 0.25
UBAP1-202ENST00000359544 USP49Q70CQ1 688 aa16.64■□□□□ 0.25
UBAP1-202ENST00000359544 TBC1D10CQ8IV04 446 aa16.64■□□□□ 0.25
UBAP1-202ENST00000359544 SMYD4Q8IYR2 804 aaPredicted RBP16.64■□□□□ 0.25
UBAP1-202ENST00000359544 CAVIN3Q969G5 261 aa16.64■□□□□ 0.25
UBAP1-202ENST00000359544 AIDAQ96BJ3 306 aa16.64■□□□□ 0.25
UBAP1-202ENST00000359544 VEZTQ9HBM0 779 aa16.64■□□□□ 0.25
UBAP1-202ENST00000359544 JADE2Q9NQC1 790 aa16.64■□□□□ 0.25
UBAP1-202ENST00000359544 SLC12A7Q9Y666 1083 aa16.64■□□□□ 0.25
UBAP1-202ENST00000359544 DPEP1P16444 411 aa16.63■□□□□ 0.25
UBAP1-202ENST00000359544 LIFRP42702 1097 aa16.63■□□□□ 0.25
UBAP1-202ENST00000359544 PAK1Q13153 545 aa16.63■□□□□ 0.25
UBAP1-202ENST00000359544 TMEM67Q5HYA8 995 aa16.63■□□□□ 0.25
UBAP1-202ENST00000359544 KDM7AQ6ZMT4 941 aa16.63■□□□□ 0.25
UBAP1-202ENST00000359544 RRP36Q96EU6 259 aaKnown RBP16.63■□□□□ 0.25
UBAP1-202ENST00000359544 LY9Q9HBG7 655 aa16.63■□□□□ 0.25
UBAP1-202ENST00000359544 PDE2AO00408 941 aaPredicted RBP16.63■□□□□ 0.25
UBAP1-202ENST00000359544 CLSTN1O94985 981 aa16.63■□□□□ 0.25
UBAP1-202ENST00000359544 TNFRSF8P28908 595 aa16.63■□□□□ 0.25
UBAP1-202ENST00000359544 CDR1P51861 262 aa16.63■□□□□ 0.25
UBAP1-202ENST00000359544 ACTN3Q08043 901 aaPredicted RBP16.63■□□□□ 0.25
UBAP1-202ENST00000359544 PRR5LQ6MZQ0 368 aa16.63■□□□□ 0.25
UBAP1-202ENST00000359544 IGDCC4Q8TDY8 1250 aa16.63■□□□□ 0.25
UBAP1-202ENST00000359544 TSGA10Q9BZW7 698 aa16.63■□□□□ 0.25
UBAP1-202ENST00000359544 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.63■□□□□ 0.25
UBAP1-202ENST00000359544 CD248Q9HCU0 757 aa16.63■□□□□ 0.25
UBAP1-202ENST00000359544 CD2APQ9Y5K6 639 aa16.63■□□□□ 0.25
UBAP1-202ENST00000359544 NID2Q14112 1375 aa16.63■□□□□ 0.25
UBAP1-202ENST00000359544 A0A1W2PQC6 194 aa16.62■□□□□ 0.25
UBAP1-202ENST00000359544 TTC26A0AVF1 554 aa16.62■□□□□ 0.25
UBAP1-202ENST00000359544 CCDC40Q4G0X9 1142 aa16.62■□□□□ 0.25
UBAP1-202ENST00000359544 WLSQ5T9L3 541 aa16.62■□□□□ 0.25
UBAP1-202ENST00000359544 NAA35Q5VZE5 725 aa16.62■□□□□ 0.25
UBAP1-202ENST00000359544 RRAGBQ5VZM2 374 aa16.62■□□□□ 0.25
UBAP1-202ENST00000359544 EP400NLQ6ZTU2 488 aa16.62■□□□□ 0.25
UBAP1-202ENST00000359544 NBPF5PQ86XG9 351 aaPredicted RBP16.62■□□□□ 0.25
UBAP1-202ENST00000359544 CCDC50Q8IVM0 306 aa16.62■□□□□ 0.25
UBAP1-202ENST00000359544 MIEF2Q96C03 454 aa16.62■□□□□ 0.25
UBAP1-202ENST00000359544 KCNJ14Q9UNX9 436 aa16.62■□□□□ 0.25
UBAP1-202ENST00000359544 SRRM3A6NNA2 597 aaPredicted RBP16.62■□□□□ 0.25
UBAP1-202ENST00000359544 H7C1W4 665 aa16.62■□□□□ 0.25
UBAP1-202ENST00000359544 ZNF185O15231 689 aa16.62■□□□□ 0.25
UBAP1-202ENST00000359544 YBX3P16989 372 aaKnown RBP eCLIP16.62■□□□□ 0.25
UBAP1-202ENST00000359544 SYNE4Q8N205 404 aa16.62■□□□□ 0.25
UBAP1-202ENST00000359544 ARL8AQ96BM9 186 aa16.62■□□□□ 0.25
UBAP1-202ENST00000359544 CEP126Q9P2H0 1117 aa16.62■□□□□ 0.25
UBAP1-202ENST00000359544 CAPN11Q9UMQ6 739 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms