RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 HEATR3Q7Z4Q2 680 aa15.91■□□□□ 0.14
PDLIM5-203ENST00000359265 HOMER1Q86YM7 354 aa15.91■□□□□ 0.14
PDLIM5-203ENST00000359265 NOSTRINQ8IVI9 506 aa15.91■□□□□ 0.14
PDLIM5-203ENST00000359265 SCYL3Q8IZE3 742 aa15.91■□□□□ 0.14
PDLIM5-203ENST00000359265 LEO1Q8WVC0 666 aaPredicted RBP15.91■□□□□ 0.14
PDLIM5-203ENST00000359265 UBA5Q9GZZ9 404 aa15.91■□□□□ 0.14
PDLIM5-203ENST00000359265 CPVLQ9H3G5 476 aa15.91■□□□□ 0.14
PDLIM5-203ENST00000359265 GBA2Q9HCG7 927 aaPredicted RBP15.91■□□□□ 0.14
PDLIM5-203ENST00000359265 PICK1Q9NRD5 415 aa15.91■□□□□ 0.14
PDLIM5-203ENST00000359265 A0A0C4DFX4 3053 aa15.9■□□□□ 0.14
PDLIM5-203ENST00000359265 PARP14Q460N5 1801 aa15.9■□□□□ 0.14
PDLIM5-203ENST00000359265 A0A1W2PRG0 241 aa15.9■□□□□ 0.14
PDLIM5-203ENST00000359265 BTBD18B2RXH4 712 aa15.9■□□□□ 0.14
PDLIM5-203ENST00000359265 STXBP3O00186 592 aa15.9■□□□□ 0.14
PDLIM5-203ENST00000359265 BMP3P12645 472 aa15.9■□□□□ 0.14
PDLIM5-203ENST00000359265 NOL9Q5SY16 702 aaKnown RBP15.9■□□□□ 0.14
PDLIM5-203ENST00000359265 WWC2Q6AWC2 1192 aa15.9■□□□□ 0.14
PDLIM5-203ENST00000359265 GALNT17Q6IS24 598 aa15.9■□□□□ 0.14
PDLIM5-203ENST00000359265 GPKOWQ92917 476 aaPredicted RBP eCLIP15.9■□□□□ 0.14
PDLIM5-203ENST00000359265 SHISA4Q96DD7 197 aa15.9■□□□□ 0.14
PDLIM5-203ENST00000359265 USP28Q96RU2 1077 aa15.9■□□□□ 0.14
PDLIM5-203ENST00000359265 PIGSQ96S52 555 aa15.9■□□□□ 0.14
PDLIM5-203ENST00000359265 FEZ1Q99689 392 aa15.9■□□□□ 0.14
PDLIM5-203ENST00000359265 VAT1LQ9HCJ6 419 aa15.9■□□□□ 0.14
PDLIM5-203ENST00000359265 POLR3EQ9NVU0 708 aa15.9■□□□□ 0.14
PDLIM5-203ENST00000359265 BARHL2Q9NY43 387 aa15.9■□□□□ 0.14
PDLIM5-203ENST00000359265 YEATS4O95619 227 aa15.89■□□□□ 0.13
PDLIM5-203ENST00000359265 NAPAP54920 295 aa15.89■□□□□ 0.13
PDLIM5-203ENST00000359265 TTBK2Q6IQ55 1244 aa15.89■□□□□ 0.13
PDLIM5-203ENST00000359265 ADGRF4Q8IZF3 695 aa15.89■□□□□ 0.13
PDLIM5-203ENST00000359265 DAGLBQ8NCG7 672 aa15.89■□□□□ 0.13
PDLIM5-203ENST00000359265 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.89■□□□□ 0.131e-6■■■□□ 17.2
PDLIM5-203ENST00000359265 ACER1Q8TDN7 264 aa15.89■□□□□ 0.13
PDLIM5-203ENST00000359265 VCPKMTQ9H867 229 aa15.89■□□□□ 0.13
PDLIM5-203ENST00000359265 AS3MTQ9HBK9 375 aa15.89■□□□□ 0.13
PDLIM5-203ENST00000359265 RTEL1Q9NZ71 1219 aa15.89■□□□□ 0.13
PDLIM5-203ENST00000359265 PTPRFP10586 1907 aa15.89■□□□□ 0.13
PDLIM5-203ENST00000359265 TRIOBPQ9H2D6 2365 aa15.89■□□□□ 0.13
PDLIM5-203ENST00000359265 PNMA6FA0A0J9YX94 578 aa15.88■□□□□ 0.13
PDLIM5-203ENST00000359265 GOLGA6L4A6NEF3 574 aa15.88■□□□□ 0.13
PDLIM5-203ENST00000359265 USP2O75604 605 aaPredicted RBP15.88■□□□□ 0.13
PDLIM5-203ENST00000359265 INPP5BP32019 993 aa15.88■□□□□ 0.13
PDLIM5-203ENST00000359265 NASPP49321 788 aaPredicted RBP15.88■□□□□ 0.13
PDLIM5-203ENST00000359265 MAP3K9P80192 1104 aa15.88■□□□□ 0.13
PDLIM5-203ENST00000359265 CEBPZQ03701 1054 aaKnown RBP15.88■□□□□ 0.13
PDLIM5-203ENST00000359265 IKQ13123 557 aaPredicted RBP15.88■□□□□ 0.13
PDLIM5-203ENST00000359265 TTLL12Q14166 644 aaPredicted RBP15.88■□□□□ 0.13
PDLIM5-203ENST00000359265 STK38Q15208 465 aa15.88■□□□□ 0.13
PDLIM5-203ENST00000359265 RILPL1Q5EBL4 403 aa15.88■□□□□ 0.13
PDLIM5-203ENST00000359265 ANO1Q5XXA6 986 aa15.88■□□□□ 0.13
PDLIM5-203ENST00000359265 PPP1R18Q6NYC8 613 aa15.88■□□□□ 0.13
PDLIM5-203ENST00000359265 ARMC9Q7Z3E5 817 aa15.88■□□□□ 0.13
PDLIM5-203ENST00000359265 C2orf69Q8N8R5 385 aa15.88■□□□□ 0.13
PDLIM5-203ENST00000359265 OXER1Q8TDS5 423 aa15.88■□□□□ 0.13
PDLIM5-203ENST00000359265 MTMR8Q96EF0 704 aa15.88■□□□□ 0.13
PDLIM5-203ENST00000359265 JMJD4Q9H9V9 463 aa15.88■□□□□ 0.13
PDLIM5-203ENST00000359265 RCOR1Q9UKL0 485 aa15.88■□□□□ 0.13
PDLIM5-203ENST00000359265 NOL7Q9UMY1 257 aaKnown RBP15.88■□□□□ 0.13
PDLIM5-203ENST00000359265 PCDHA4Q9UN74 947 aa15.88■□□□□ 0.13
PDLIM5-203ENST00000359265 CSADQ9Y600 493 aa15.88■□□□□ 0.13
PDLIM5-203ENST00000359265 ESYT2A0FGR8 921 aa15.87■□□□□ 0.13
PDLIM5-203ENST00000359265 GADD45BO75293 160 aaPredicted RBP15.87■□□□□ 0.13
PDLIM5-203ENST00000359265 SLC16A2P36021 539 aa15.87■□□□□ 0.13
PDLIM5-203ENST00000359265 NR5A1Q13285 461 aa15.87■□□□□ 0.13
PDLIM5-203ENST00000359265 PRKG1Q13976 671 aa15.87■□□□□ 0.13
PDLIM5-203ENST00000359265 NPY5RQ15761 445 aa15.87■□□□□ 0.13
PDLIM5-203ENST00000359265 MAP3K11Q16584 847 aa15.87■□□□□ 0.13
PDLIM5-203ENST00000359265 SYDE2Q5VT97 1194 aa15.87■□□□□ 0.13
PDLIM5-203ENST00000359265 BTNL9Q6UXG8 535 aa15.87■□□□□ 0.13
PDLIM5-203ENST00000359265 BLIDQ8IZY5 108 aa15.87■□□□□ 0.13
PDLIM5-203ENST00000359265 GPT2Q8TD30 523 aa15.87■□□□□ 0.13
PDLIM5-203ENST00000359265 KCNG4Q8TDN1 519 aa15.87■□□□□ 0.13
PDLIM5-203ENST00000359265 OTUD5Q96G74 571 aa15.87■□□□□ 0.13
PDLIM5-203ENST00000359265 C6orf50Q9HD87 102 aa15.87■□□□□ 0.13
PDLIM5-203ENST00000359265 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.87■□□□□ 0.13
PDLIM5-203ENST00000359265 RBBP6Q7Z6E9 1792 aaKnown RBP15.87■□□□□ 0.13
PDLIM5-203ENST00000359265 UNCXA6NJT0 531 aa15.86■□□□□ 0.13
PDLIM5-203ENST00000359265 USP17L10C9JJH3 530 aa15.86■□□□□ 0.13
PDLIM5-203ENST00000359265 TMEM232C9JQI7 657 aa15.86■□□□□ 0.13
PDLIM5-203ENST00000359265 ZBTB5O15062 677 aa15.86■□□□□ 0.13
PDLIM5-203ENST00000359265 GNA11P29992 359 aa15.86■□□□□ 0.13
PDLIM5-203ENST00000359265 FKBP1BP68106 108 aa15.86■□□□□ 0.13
PDLIM5-203ENST00000359265 SF3A1Q15459 793 aaKnown RBP15.86■□□□□ 0.13
PDLIM5-203ENST00000359265 ZYXQ15942 572 aaKnown RBP15.86■□□□□ 0.13
PDLIM5-203ENST00000359265 TYW1BQ6NUM6 668 aa15.86■□□□□ 0.13
PDLIM5-203ENST00000359265 ANKRD13AQ8IZ07 590 aa15.86■□□□□ 0.13
PDLIM5-203ENST00000359265 SPICE1Q8N0Z3 855 aa15.86■□□□□ 0.13
PDLIM5-203ENST00000359265 LPAR1Q92633 364 aa15.86■□□□□ 0.13
PDLIM5-203ENST00000359265 TNFRSF25Q93038 417 aa15.86■□□□□ 0.13
PDLIM5-203ENST00000359265 ZKSCAN4Q969J2 545 aaPredicted RBP15.86■□□□□ 0.13
PDLIM5-203ENST00000359265 SYAP1Q96A49 352 aaPredicted RBP15.86■□□□□ 0.13
PDLIM5-203ENST00000359265 NUP88Q99567 741 aaPredicted RBP15.86■□□□□ 0.13
PDLIM5-203ENST00000359265 FTOQ9C0B1 505 aaKnown RBP eCLIP15.86■□□□□ 0.13
PDLIM5-203ENST00000359265 ZMYND12Q9H0C1 365 aa15.86■□□□□ 0.13
PDLIM5-203ENST00000359265 COL6A3P12111 3177 aa15.86■□□□□ 0.13
PDLIM5-203ENST00000359265 GPR25O00155 361 aa15.85■□□□□ 0.13
PDLIM5-203ENST00000359265 PTPRAP18433 802 aa15.85■□□□□ 0.13
PDLIM5-203ENST00000359265 EN2P19622 333 aaPredicted RBP15.85■□□□□ 0.13
PDLIM5-203ENST00000359265 STAT2P52630 851 aa15.85■□□□□ 0.13
PDLIM5-203ENST00000359265 USP14P54578 494 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms