RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 KINO60870 393 aaKnown RBP12.32□□□□□ -0.44
TRAPPC4-201ENST00000359005 GADD45BO75293 160 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC4-201ENST00000359005 ALDH1A1P00352 501 aa12.32□□□□□ -0.44
TRAPPC4-201ENST00000359005 SHMT1P34896 483 aa12.32□□□□□ -0.44
TRAPPC4-201ENST00000359005 SOX10P56693 466 aa12.32□□□□□ -0.44
TRAPPC4-201ENST00000359005 SLC39A14Q15043 492 aa12.32□□□□□ -0.44
TRAPPC4-201ENST00000359005 ZRSR1Q15695 479 aaKnown RBP12.32□□□□□ -0.44
TRAPPC4-201ENST00000359005 TATDN1Q6P1N9 297 aa12.32□□□□□ -0.44
TRAPPC4-201ENST00000359005 CCDC84Q86UT8 332 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC4-201ENST00000359005 NKX2-3Q8TAU0 364 aa12.32□□□□□ -0.44
TRAPPC4-201ENST00000359005 DCAF4Q8WV16 495 aa12.32□□□□□ -0.44
TRAPPC4-201ENST00000359005 MRPS27Q92552 414 aaKnown RBP12.32□□□□□ -0.44
TRAPPC4-201ENST00000359005 PHF20Q9BVI0 1012 aa12.32□□□□□ -0.44
TRAPPC4-201ENST00000359005 MAD2L2Q9UI95 211 aa12.32□□□□□ -0.44
TRAPPC4-201ENST00000359005 MORC2Q9Y6X9 1032 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC4-201ENST00000359005 TCHHQ07283 1943 aa12.31□□□□□ -0.44
TRAPPC4-201ENST00000359005 IGKV6D-41A0A0C4DH26 115 aa12.31□□□□□ -0.44
TRAPPC4-201ENST00000359005 TBC1D12O60347 775 aa12.31□□□□□ -0.44
TRAPPC4-201ENST00000359005 PPFIA3O75145 1194 aa12.31□□□□□ -0.44
TRAPPC4-201ENST00000359005 PLEKHA8P1O95397 391 aa12.31□□□□□ -0.44
TRAPPC4-201ENST00000359005 GTF2A2P52657 109 aa12.31□□□□□ -0.44
TRAPPC4-201ENST00000359005 CEBPZQ03701 1054 aaKnown RBP12.31□□□□□ -0.44
TRAPPC4-201ENST00000359005 FUT2Q10981 343 aa12.31□□□□□ -0.44
TRAPPC4-201ENST00000359005 PPIL2Q13356 520 aa12.31□□□□□ -0.44
TRAPPC4-201ENST00000359005 ABCB5Q2M3G0 1257 aa12.31□□□□□ -0.44
TRAPPC4-201ENST00000359005 DCAF15Q66K64 600 aa12.31□□□□□ -0.44
TRAPPC4-201ENST00000359005 MCTP2Q6DN12 878 aa12.31□□□□□ -0.44
TRAPPC4-201ENST00000359005 PPP1R18Q6NYC8 613 aa12.31□□□□□ -0.44
TRAPPC4-201ENST00000359005 FAM173BQ6P4H8 233 aa12.31□□□□□ -0.44
TRAPPC4-201ENST00000359005 TEX2Q8IWB9 1127 aa12.31□□□□□ -0.44
TRAPPC4-201ENST00000359005 SRBD1Q8N5C6 995 aaKnown RBP12.31□□□□□ -0.44
TRAPPC4-201ENST00000359005 LINC00301Q8NCQ3 95 aa12.31□□□□□ -0.44
TRAPPC4-201ENST00000359005 CD99L2Q8TCZ2 262 aa12.31□□□□□ -0.44
TRAPPC4-201ENST00000359005 MKL1Q969V6 931 aa12.31□□□□□ -0.44
TRAPPC4-201ENST00000359005 USP28Q96RU2 1077 aa12.31□□□□□ -0.44
TRAPPC4-201ENST00000359005 PYM1Q9BRP8 204 aaKnown RBP12.31□□□□□ -0.44
TRAPPC4-201ENST00000359005 TNMDQ9H2S6 317 aa12.31□□□□□ -0.44
TRAPPC4-201ENST00000359005 TSPY26PQ9H489 355 aa12.31□□□□□ -0.44
TRAPPC4-201ENST00000359005 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.31□□□□□ -0.44
TRAPPC4-201ENST00000359005 GRPEL1Q9HAV7 217 aa12.31□□□□□ -0.44
TRAPPC4-201ENST00000359005 ARHGEF10LQ9HCE6 1279 aa12.31□□□□□ -0.44
TRAPPC4-201ENST00000359005 C6orf50Q9HD87 102 aa12.31□□□□□ -0.44
TRAPPC4-201ENST00000359005 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.31□□□□□ -0.44
TRAPPC4-201ENST00000359005 CLIP2Q9UDT6 1046 aa12.31□□□□□ -0.44
TRAPPC4-201ENST00000359005 FSD2A1L4K1 749 aa12.3□□□□□ -0.44
TRAPPC4-201ENST00000359005 SMIM22K7EJ46 135 aa12.3□□□□□ -0.44
TRAPPC4-201ENST00000359005 CUTAO60888 179 aa12.3□□□□□ -0.44
TRAPPC4-201ENST00000359005 CCDC192P0DO97 292 aa12.3□□□□□ -0.44
TRAPPC4-201ENST00000359005 AKR1B1P15121 316 aa12.3□□□□□ -0.44
TRAPPC4-201ENST00000359005 FAM160A1Q05DH4 1040 aa12.3□□□□□ -0.44
TRAPPC4-201ENST00000359005 OTUD7BQ6GQQ9 843 aa12.3□□□□□ -0.44
TRAPPC4-201ENST00000359005 OTOP1Q7RTM1 612 aa12.3□□□□□ -0.44
TRAPPC4-201ENST00000359005 CCAR1Q8IX12 1150 aaKnown RBP12.3□□□□□ -0.44
TRAPPC4-201ENST00000359005 ARHGAP39Q9C0H5 1083 aa12.3□□□□□ -0.44
TRAPPC4-201ENST00000359005 FAM13BQ9NYF5 915 aa12.3□□□□□ -0.44
TRAPPC4-201ENST00000359005 TMEM63CQ9P1W3 806 aa12.3□□□□□ -0.44
TRAPPC4-201ENST00000359005 CCDC194A0A1B0GVG4 234 aa12.29□□□□□ -0.44
TRAPPC4-201ENST00000359005 SYCE3A1L190 88 aa12.29□□□□□ -0.44
TRAPPC4-201ENST00000359005 TRIM75PA6NK02 468 aa12.29□□□□□ -0.44
TRAPPC4-201ENST00000359005 BTBD18B2RXH4 712 aa12.29□□□□□ -0.44
TRAPPC4-201ENST00000359005 SNHG28P0DPA3 235 aa12.29□□□□□ -0.44
TRAPPC4-201ENST00000359005 CTGFP29279 349 aa12.29□□□□□ -0.44
TRAPPC4-201ENST00000359005 JAG1P78504 1218 aa12.29□□□□□ -0.44
TRAPPC4-201ENST00000359005 ATP2B2Q01814 1243 aa12.29□□□□□ -0.44
TRAPPC4-201ENST00000359005 ICA1Q05084 483 aa12.29□□□□□ -0.44
TRAPPC4-201ENST00000359005 PPATQ06203 517 aa12.29□□□□□ -0.44
TRAPPC4-201ENST00000359005 ORC2Q13416 577 aaPredicted RBP12.29□□□□□ -0.44
TRAPPC4-201ENST00000359005 PKN1Q16512 942 aa12.29□□□□□ -0.44
TRAPPC4-201ENST00000359005 SHROOM1Q2M3G4 852 aaPredicted RBP12.29□□□□□ -0.44
TRAPPC4-201ENST00000359005 NOL9Q5SY16 702 aaKnown RBP12.29□□□□□ -0.44
TRAPPC4-201ENST00000359005 GPAT2Q6NUI2 795 aa12.29□□□□□ -0.44
TRAPPC4-201ENST00000359005 CMTR1Q8N1G2 835 aaKnown RBP12.29□□□□□ -0.44
TRAPPC4-201ENST00000359005 DAGLBQ8NCG7 672 aa12.29□□□□□ -0.44
TRAPPC4-201ENST00000359005 GOPCQ9HD26 462 aa12.29□□□□□ -0.44
TRAPPC4-201ENST00000359005 BARHL2Q9NY43 387 aa12.29□□□□□ -0.44
TRAPPC4-201ENST00000359005 VPS54Q9P1Q0 977 aa12.29□□□□□ -0.44
TRAPPC4-201ENST00000359005 PCDHA4Q9UN74 947 aa12.29□□□□□ -0.44
TRAPPC4-201ENST00000359005 KCNH4Q9UQ05 1017 aa12.29□□□□□ -0.44
TRAPPC4-201ENST00000359005 TRIM17Q9Y577 477 aa12.29□□□□□ -0.44
TRAPPC4-201ENST00000359005 ZHX2Q9Y6X8 837 aa12.29□□□□□ -0.44
TRAPPC4-201ENST00000359005 ESYT2A0FGR8 921 aa12.28□□□□□ -0.44
TRAPPC4-201ENST00000359005 DTNBO60941 627 aa12.28□□□□□ -0.44
TRAPPC4-201ENST00000359005 ECM2O94769 699 aaPredicted RBP12.28□□□□□ -0.44
TRAPPC4-201ENST00000359005 PDHBP11177 359 aa12.28□□□□□ -0.44
TRAPPC4-201ENST00000359005 CETPP11597 493 aa12.28□□□□□ -0.44
TRAPPC4-201ENST00000359005 PTPRAP18433 802 aa12.28□□□□□ -0.44
TRAPPC4-201ENST00000359005 CMA1P23946 247 aa12.28□□□□□ -0.44
TRAPPC4-201ENST00000359005 GUCY1A2P33402 732 aa12.28□□□□□ -0.44
TRAPPC4-201ENST00000359005 NAPAP54920 295 aa12.28□□□□□ -0.44
TRAPPC4-201ENST00000359005 SP3Q02447 781 aa12.28□□□□□ -0.44
TRAPPC4-201ENST00000359005 EVX2Q03828 476 aa12.28□□□□□ -0.44
TRAPPC4-201ENST00000359005 SNAPC2Q13487 334 aa12.28□□□□□ -0.44
TRAPPC4-201ENST00000359005 TAF1CQ15572 869 aaPredicted RBP12.28□□□□□ -0.44
TRAPPC4-201ENST00000359005 CCDC96Q2M329 555 aa12.28□□□□□ -0.44
TRAPPC4-201ENST00000359005 FBXO46Q6PJ61 603 aaPredicted RBP12.28□□□□□ -0.44
TRAPPC4-201ENST00000359005 SASS6Q6UVJ0 657 aa12.28□□□□□ -0.44
TRAPPC4-201ENST00000359005 KRT25Q7Z3Z0 450 aa12.28□□□□□ -0.44
TRAPPC4-201ENST00000359005 HEATR3Q7Z4Q2 680 aa12.28□□□□□ -0.44
TRAPPC4-201ENST00000359005 BLIDQ8IZY5 108 aa12.28□□□□□ -0.44
TRAPPC4-201ENST00000359005 KRI1Q8N9T8 703 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms