RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 GLG1Q92896 1179 aa12.24□□□□□ -0.45
COL11A1-202ENST00000358392 IRAK4Q9NWZ3 460 aa12.24□□□□□ -0.45
COL11A1-202ENST00000358392 ANAPC5Q9UJX4 755 aa12.24□□□□□ -0.45
COL11A1-202ENST00000358392 NCOA1Q15788 1441 aa12.23□□□□□ -0.45
COL11A1-202ENST00000358392 LPXNO60711 386 aa12.23□□□□□ -0.45
COL11A1-202ENST00000358392 TMTC3Q6ZXV5 915 aa12.23□□□□□ -0.45
COL11A1-202ENST00000358392 ANKRD13CQ8N6S4 541 aa12.23□□□□□ -0.45
COL11A1-202ENST00000358392 TRPC6Q9Y210 931 aa12.23□□□□□ -0.45
COL11A1-202ENST00000358392 RALGAPBQ86X10 1494 aa12.23□□□□□ -0.45
COL11A1-202ENST00000358392 PALM3A6NDB9 673 aaPredicted RBP12.23□□□□□ -0.45
COL11A1-202ENST00000358392 DNAJC8O75937 253 aaPredicted RBP12.23□□□□□ -0.45
COL11A1-202ENST00000358392 INHBAP08476 426 aa12.23□□□□□ -0.45
COL11A1-202ENST00000358392 PIK3CAP42336 1068 aa12.23□□□□□ -0.45
COL11A1-202ENST00000358392 KRT25Q7Z3Z0 450 aa12.23□□□□□ -0.45
COL11A1-202ENST00000358392 CEP19Q96LK0 163 aa12.23□□□□□ -0.45
COL11A1-202ENST00000358392 ATP6V1E2Q96A05 226 aa12.23□□□□□ -0.45
COL11A1-202ENST00000358392 MAP3K1Q13233 1512 aa12.23□□□□□ -0.45
COL11A1-202ENST00000358392 GAS7O60861 476 aa12.23□□□□□ -0.45
COL11A1-202ENST00000358392 GPC4O75487 556 aa12.23□□□□□ -0.45
COL11A1-202ENST00000358392 PAGR1Q9BTK6 254 aa12.23□□□□□ -0.45
COL11A1-202ENST00000358392 SPATS2LQ9NUQ6 558 aaKnown RBP12.23□□□□□ -0.45
COL11A1-202ENST00000358392 RYBPQ8N488 228 aaPredicted RBP12.23□□□□□ -0.45
COL11A1-202ENST00000358392 APOL6Q9BWW8 343 aa12.23□□□□□ -0.45
COL11A1-202ENST00000358392 SLC39A2Q9NP94 309 aa12.23□□□□□ -0.45
COL11A1-202ENST00000358392 EPS15L1Q9UBC2 864 aa12.23□□□□□ -0.45
COL11A1-202ENST00000358392 EHHADHQ08426 723 aa12.23□□□□□ -0.45
COL11A1-202ENST00000358392 ARHGEF16Q5VV41 709 aa12.23□□□□□ -0.45
COL11A1-202ENST00000358392 PPM1KQ8N3J5 372 aa12.23□□□□□ -0.45
COL11A1-202ENST00000358392 NBPF3Q9H094 633 aa12.23□□□□□ -0.45
COL11A1-202ENST00000358392 TYW1Q9NV66 732 aaKnown RBP12.23□□□□□ -0.45
COL11A1-202ENST00000358392 INTS9Q9NV88 658 aaKnown RBP12.23□□□□□ -0.45
COL11A1-202ENST00000358392 TMOD1P28289 359 aa12.22□□□□□ -0.45
COL11A1-202ENST00000358392 MESDQ14696 234 aa12.22□□□□□ -0.45
COL11A1-202ENST00000358392 TTC30BQ8N4P2 665 aa12.22□□□□□ -0.45
COL11A1-202ENST00000358392 GOLGA5Q8TBA6 731 aa12.22□□□□□ -0.45
COL11A1-202ENST00000358392 CFAP36Q96G28 342 aa12.22□□□□□ -0.45
COL11A1-202ENST00000358392 SMCO2A6NFE2 343 aa12.22□□□□□ -0.45
COL11A1-202ENST00000358392 DKC1O60832 514 aaKnown RBP eCLIP12.22□□□□□ -0.45
COL11A1-202ENST00000358392 PFKFB1P16118 471 aa12.22□□□□□ -0.45
COL11A1-202ENST00000358392 RINT1Q6NUQ1 792 aa12.22□□□□□ -0.45
COL11A1-202ENST00000358392 JPH2Q9BR39 696 aaPredicted RBP12.22□□□□□ -0.45
COL11A1-202ENST00000358392 DISC1Q9NRI5 854 aa12.22□□□□□ -0.45
COL11A1-202ENST00000358392 ZBTB40Q9NUA8 1239 aa12.22□□□□□ -0.45
COL11A1-202ENST00000358392 LMBRD1Q9NUN5 540 aa12.22□□□□□ -0.45
COL11A1-202ENST00000358392 TMEM63CQ9P1W3 806 aa12.22□□□□□ -0.45
COL11A1-202ENST00000358392 ZNF215Q9UL58 517 aaPredicted RBP12.22□□□□□ -0.45
COL11A1-202ENST00000358392 RNF8O76064 485 aa12.22□□□□□ -0.45
COL11A1-202ENST00000358392 NPR1P16066 1061 aa12.22□□□□□ -0.45
COL11A1-202ENST00000358392 CXCR5P32302 372 aa12.22□□□□□ -0.45
COL11A1-202ENST00000358392 DYNLT1P63172 113 aa12.22□□□□□ -0.45
COL11A1-202ENST00000358392 PDE1BQ01064 536 aa12.22□□□□□ -0.45
COL11A1-202ENST00000358392 CYTH2Q99418 400 aa12.22□□□□□ -0.45
COL11A1-202ENST00000358392 ZC4H2Q9NQZ6 224 aa12.22□□□□□ -0.45
COL11A1-202ENST00000358392 THRAP3Q9Y2W1 955 aaKnown RBP12.22□□□□□ -0.45
COL11A1-202ENST00000358392 CFLARO15519 480 aa12.22□□□□□ -0.45
COL11A1-202ENST00000358392 SUN1O94901 812 aa12.22□□□□□ -0.45
COL11A1-202ENST00000358392 IGBP1P78318 339 aa12.22□□□□□ -0.45
COL11A1-202ENST00000358392 IDI1Q13907 227 aa12.22□□□□□ -0.45
COL11A1-202ENST00000358392 CCDC197Q8NCU1 140 aa12.22□□□□□ -0.45
COL11A1-202ENST00000358392 CCDC127Q96BQ5 260 aa12.22□□□□□ -0.45
COL11A1-202ENST00000358392 LARSQ9P2J5 1176 aaKnown RBP12.22□□□□□ -0.45
COL11A1-202ENST00000358392 MRFAP1Q9Y605 127 aa12.22□□□□□ -0.45
COL11A1-202ENST00000358392 WDR7Q9Y4E6 1490 aa12.22□□□□□ -0.45
COL11A1-202ENST00000358392 EFCAB5A4FU69 1503 aa12.22□□□□□ -0.45
COL11A1-202ENST00000358392 NCF2P19878 526 aaPredicted RBP12.22□□□□□ -0.45
COL11A1-202ENST00000358392 SLCO1A2P46721 670 aa12.22□□□□□ -0.45
COL11A1-202ENST00000358392 OTUD6AQ7L8S5 288 aa12.22□□□□□ -0.45
COL11A1-202ENST00000358392 LRRC8AQ8IWT6 810 aa12.22□□□□□ -0.45
COL11A1-202ENST00000358392 HAUS1Q96CS2 278 aa12.22□□□□□ -0.45
COL11A1-202ENST00000358392 ZNF532Q9HCE3 1301 aa12.22□□□□□ -0.45
COL11A1-202ENST00000358392 VAMP4O75379 141 aa12.22□□□□□ -0.45
COL11A1-202ENST00000358392 TOM1L1O75674 476 aa12.22□□□□□ -0.45
COL11A1-202ENST00000358392 GNA14O95837 355 aa12.22□□□□□ -0.45
COL11A1-202ENST00000358392 HABP4Q5JVS0 413 aaKnown RBP12.22□□□□□ -0.45
COL11A1-202ENST00000358392 PGBD1Q96JS3 809 aa12.22□□□□□ -0.45
COL11A1-202ENST00000358392 CLIC6Q96NY7 704 aa12.22□□□□□ -0.45
COL11A1-202ENST00000358392 IQCB1Q15051 598 aa12.21□□□□□ -0.45
COL11A1-202ENST00000358392 CCDC84Q86UT8 332 aaPredicted RBP12.21□□□□□ -0.45
COL11A1-202ENST00000358392 OR8K1Q8NGG5 319 aa12.21□□□□□ -0.45
COL11A1-202ENST00000358392 THOC1Q96FV9 657 aaKnown RBP12.21□□□□□ -0.45
COL11A1-202ENST00000358392 CC2D2AQ9P2K1 1620 aa12.21□□□□□ -0.45
COL11A1-202ENST00000358392 PRPSAP1Q14558 356 aa12.21□□□□□ -0.45
COL11A1-202ENST00000358392 MYOCDQ8IZQ8 938 aa12.21□□□□□ -0.45
COL11A1-202ENST00000358392 TEKT1Q969V4 418 aa12.21□□□□□ -0.45
COL11A1-202ENST00000358392 THEGQ9P2T0 379 aa12.21□□□□□ -0.45
COL11A1-202ENST00000358392 RRP15Q9Y3B9 282 aaKnown RBP12.21□□□□□ -0.45
COL11A1-202ENST00000358392 MAP3K5Q99683 1374 aa12.21□□□□□ -0.45
COL11A1-202ENST00000358392 KIF11P52732 1056 aa12.21□□□□□ -0.45
COL11A1-202ENST00000358392 TAF11Q15544 211 aa12.21□□□□□ -0.45
COL11A1-202ENST00000358392 UBN1Q9NPG3 1134 aa12.21□□□□□ -0.45
COL11A1-202ENST00000358392 KIF14Q15058 1648 aa12.21□□□□□ -0.45
COL11A1-202ENST00000358392 TNNC2P02585 160 aa12.21□□□□□ -0.46
COL11A1-202ENST00000358392 IL9RQ01113 521 aa12.21□□□□□ -0.46
COL11A1-202ENST00000358392 ALKBH8Q96BT7 664 aaKnown RBP12.21□□□□□ -0.46
COL11A1-202ENST00000358392 C1orf112Q9NSG2 853 aa12.21□□□□□ -0.46
COL11A1-202ENST00000358392 ZNF445P59923 1031 aa12.21□□□□□ -0.46
COL11A1-202ENST00000358392 YWHAEP62258 255 aaKnown RBP12.21□□□□□ -0.46
COL11A1-202ENST00000358392 CYP4F22Q6NT55 531 aa12.21□□□□□ -0.46
COL11A1-202ENST00000358392 STK24Q9Y6E0 443 aa12.21□□□□□ -0.46
COL11A1-202ENST00000358392 PCF11O94913 1555 aaKnown RBP12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms