RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 IDEP14735 1019 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 KARSQ15046 597 aaKnown RBP4.52□□□□□ -1.69
SYNE2-204ENST00000358025 ANGPTL2Q9UKU9 493 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 STAT1P42224 750 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 ENGASEQ8NFI3 743 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 AMFRQ9UKV5 643 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 KCNJ18B7U540 433 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 IGHMBP2P38935 993 aaKnown RBP4.52□□□□□ -1.69
SYNE2-204ENST00000358025 MDH1P40925 334 aaKnown RBP4.52□□□□□ -1.69
SYNE2-204ENST00000358025 ASIC1P78348 528 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 KCNJ12Q14500 433 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 TCP11X2Q5H9J9 407 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 TSC22D3Q99576 134 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 TAF1DQ9H5J8 278 aaPredicted RBP4.52□□□□□ -1.69
SYNE2-204ENST00000358025 ZWINTO95229 277 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 YY1P25490 414 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 LONRF3Q496Y0 759 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 NBPF6Q5VWK0 638 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 INTS8Q75QN2 995 aaKnown RBP4.52□□□□□ -1.69
SYNE2-204ENST00000358025 CCDC89Q8N998 374 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 NBPF4Q96M43 638 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 TUBGCP2Q9BSJ2 902 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 EPS15L1Q9UBC2 864 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 SSX2IPQ9Y2D8 614 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 USP32Q8NFA0 1604 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 GCKRQ14397 625 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 VSIG1Q86XK7 387 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 NME9Q86XW9 330 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 BICC1Q9H694 974 aaKnown RBP4.52□□□□□ -1.69
SYNE2-204ENST00000358025 NRBP1Q9UHY1 535 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 ARL2BPQ9Y2Y0 163 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 ABCA8O94911 1581 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 ASIC2Q16515 512 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 CAPRIN2Q6IMN6 1127 aaKnown RBP4.52□□□□□ -1.69
SYNE2-204ENST00000358025 RPUSD2Q8IZ73 545 aaKnown RBP4.52□□□□□ -1.69
SYNE2-204ENST00000358025 MICAL1Q8TDZ2 1067 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 IFT122Q9HBG6 1241 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 ANKARQ7Z5J8 1434 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 MIF4GDA9UHW6 222 aaKnown RBP4.52□□□□□ -1.69
SYNE2-204ENST00000358025 SMIM24O75264 130 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 MEX3CQ5U5Q3 659 aaKnown RBP4.52□□□□□ -1.69
SYNE2-204ENST00000358025 VPS52Q8N1B4 723 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 CCDC8Q9H0W5 538 aaPredicted RBP4.52□□□□□ -1.69
SYNE2-204ENST00000358025 COPB1P53618 953 aaKnown RBP4.52□□□□□ -1.69
SYNE2-204ENST00000358025 CUL3Q13618 768 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 KCNF1Q9H3M0 494 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 PVALEFA0A1B0GWK0 134 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 PLA2G4AP47712 749 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 MXRA7P84157 204 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 FYB2Q5VWT5 728 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 PARP9Q8IXQ6 854 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 C17orf53Q8N3J3 647 aaPredicted RBP4.52□□□□□ -1.69
SYNE2-204ENST00000358025 NSUN7Q8NE18 718 aaKnown RBP4.52□□□□□ -1.69
SYNE2-204ENST00000358025 SMC6Q96SB8 1091 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 CCT8L2Q96SF2 557 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 EFHD1Q9BUP0 239 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 TRIM4Q9C037 500 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 PGRMC1O00264 195 aaKnown RBP4.52□□□□□ -1.69
SYNE2-204ENST00000358025 FGAP02671 866 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 FANCBQ8NB91 859 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 OTUD7AQ8TE49 926 aaPredicted RBP4.52□□□□□ -1.69
SYNE2-204ENST00000358025 ABCA9Q8IUA7 1624 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 PXDNLA1KZ92 1463 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 ZFXP17010 805 aaPredicted RBP4.52□□□□□ -1.69
SYNE2-204ENST00000358025 KRT71Q3SY84 523 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 AKNAD1Q5T1N1 836 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 CROCCP3Q8IVE0 287 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 CPLX3Q8WVH0 158 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 ATP6V1G3Q96LB4 118 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 MMRN2Q9H8L6 949 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 E7EVH7 732 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 CALUO43852 315 aaPredicted RBP4.52□□□□□ -1.69
SYNE2-204ENST00000358025 EVA1CP58658 441 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 ILF2Q12905 390 aaKnown RBP4.52□□□□□ -1.69
SYNE2-204ENST00000358025 TRIM65Q6PJ69 517 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 COL23A1Q86Y22 540 aaPredicted RBP4.52□□□□□ -1.69
SYNE2-204ENST00000358025 LRRC37BQ96QE4 947 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 ZKSCAN3Q9BRR0 538 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 EIF2S1P05198 315 aaKnown RBP4.52□□□□□ -1.69
SYNE2-204ENST00000358025 FERP16591 822 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 SKOR1P84550 965 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 ARHGAP4P98171 946 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 PDP2Q9P2J9 529 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 MAN1B1Q9UKM7 699 aa4.52□□□□□ -1.69
SYNE2-204ENST00000358025 E7EWF7 191 aa4.51□□□□□ -1.69
SYNE2-204ENST00000358025 ACADSP16219 412 aa4.51□□□□□ -1.69
SYNE2-204ENST00000358025 KLHL30Q0D2K2 578 aa4.51□□□□□ -1.69
SYNE2-204ENST00000358025 KRT40Q6A162 431 aa4.51□□□□□ -1.69
SYNE2-204ENST00000358025 KRT39Q6A163 491 aa4.51□□□□□ -1.69
SYNE2-204ENST00000358025 CHPF2Q9P2E5 772 aa4.51□□□□□ -1.69
SYNE2-204ENST00000358025 PLAGL2Q9UPG8 496 aa4.51□□□□□ -1.69
SYNE2-204ENST00000358025 PARP3Q9Y6F1 533 aa4.51□□□□□ -1.69
SYNE2-204ENST00000358025 NCAPD2Q15021 1401 aa4.51□□□□□ -1.69
SYNE2-204ENST00000358025 PPP1R37O75864 691 aa4.51□□□□□ -1.69
SYNE2-204ENST00000358025 SEPT6Q14141 434 aa4.51□□□□□ -1.69
SYNE2-204ENST00000358025 CNOT7Q9UIV1 285 aaKnown RBP4.51□□□□□ -1.69
SYNE2-204ENST00000358025 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.51□□□□□ -1.69
SYNE2-204ENST00000358025 MAGI3Q5TCQ9 1506 aa4.51□□□□□ -1.69
SYNE2-204ENST00000358025 IGSF1Q8N6C5 1336 aa4.51□□□□□ -1.69
SYNE2-204ENST00000358025 GSTTP1A0A1W2PQM5 241 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms