RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 EPB41L4AQ9HCS5 686 aaPredicted RBP11.12□□□□□ -0.63
RNF40-202ENST00000357890 STRCP1A6NGW2 1772 aa11.12□□□□□ -0.63
RNF40-202ENST00000357890 A0A0U1RQJ8 604 aa11.12□□□□□ -0.63
RNF40-202ENST00000357890 FAM205CA6NFA0 338 aa11.12□□□□□ -0.63
RNF40-202ENST00000357890 CXCR5P32302 372 aa11.12□□□□□ -0.63
RNF40-202ENST00000357890 RSRC2Q7L4I2 434 aaKnown RBP11.12□□□□□ -0.63
RNF40-202ENST00000357890 SH2D3CQ8N5H7 860 aa11.12□□□□□ -0.63
RNF40-202ENST00000357890 NAA15Q9BXJ9 866 aaKnown RBP11.12□□□□□ -0.63
RNF40-202ENST00000357890 MKNK2Q9HBH9 465 aa11.12□□□□□ -0.63
RNF40-202ENST00000357890 GOPCQ9HD26 462 aa11.12□□□□□ -0.63
RNF40-202ENST00000357890 RMND1Q9NWS8 449 aa11.12□□□□□ -0.63
RNF40-202ENST00000357890 DONSONQ9NYP3 566 aa11.12□□□□□ -0.63
RNF40-202ENST00000357890 STX8Q9UNK0 236 aa11.12□□□□□ -0.63
RNF40-202ENST00000357890 CYP2D7A0A087X1C5 515 aa11.11□□□□□ -0.63
RNF40-202ENST00000357890 CHUKO15111 745 aa11.11□□□□□ -0.63
RNF40-202ENST00000357890 SKAP2O75563 359 aaPredicted RBP11.11□□□□□ -0.63
RNF40-202ENST00000357890 CYLC1P35663 651 aaPredicted RBP11.11□□□□□ -0.63
RNF40-202ENST00000357890 IRAK1P51617 712 aa11.11□□□□□ -0.63
RNF40-202ENST00000357890 SNCBQ16143 134 aa11.11□□□□□ -0.63
RNF40-202ENST00000357890 PYM1Q9BRP8 204 aaKnown RBP11.11□□□□□ -0.63
RNF40-202ENST00000357890 RNF26Q9BY78 433 aaPredicted RBP11.11□□□□□ -0.63
RNF40-202ENST00000357890 ELF1P32519 619 aa11.11□□□□□ -0.63
RNF40-202ENST00000357890 TUBB2AQ13885 445 aa11.11□□□□□ -0.63
RNF40-202ENST00000357890 NTRK3Q16288 839 aa11.11□□□□□ -0.63
RNF40-202ENST00000357890 C8orf74Q6P047 294 aa11.11□□□□□ -0.63
RNF40-202ENST00000357890 RAD9BQ6WBX8 426 aa11.11□□□□□ -0.63
RNF40-202ENST00000357890 NELFBQ8WX92 580 aa11.11□□□□□ -0.63
RNF40-202ENST00000357890 FERMT2Q96AC1 680 aa11.11□□□□□ -0.63
RNF40-202ENST00000357890 CDK5RAP3Q96JB5 506 aa11.11□□□□□ -0.63
RNF40-202ENST00000357890 MAP3K14Q99558 947 aa11.11□□□□□ -0.63
RNF40-202ENST00000357890 TUBB2BQ9BVA1 445 aa11.11□□□□□ -0.63
RNF40-202ENST00000357890 CRNKL1Q9BZJ0 848 aaKnown RBP11.11□□□□□ -0.63
RNF40-202ENST00000357890 TRIM6Q9C030 488 aaPredicted RBP11.11□□□□□ -0.63
RNF40-202ENST00000357890 NBPF3Q9H094 633 aa11.11□□□□□ -0.63
RNF40-202ENST00000357890 FBXO2Q9UK22 296 aaPredicted RBP11.11□□□□□ -0.63
RNF40-202ENST00000357890 CAMTA1Q9Y6Y1 1673 aa11.11□□□□□ -0.63
RNF40-202ENST00000357890 PSMA7O14818 248 aa11.11□□□□□ -0.63
RNF40-202ENST00000357890 BACH1O14867 736 aa11.11□□□□□ -0.63
RNF40-202ENST00000357890 GYG1P46976 350 aa11.11□□□□□ -0.63
RNF40-202ENST00000357890 FAM47AQ5JRC9 791 aa11.11□□□□□ -0.63
RNF40-202ENST00000357890 EHBP1Q8NDI1 1231 aa11.11□□□□□ -0.63
RNF40-202ENST00000357890 PAGE5Q96GU1 130 aa11.11□□□□□ -0.63
RNF40-202ENST00000357890 MTA3Q9BTC8 594 aa11.11□□□□□ -0.63
RNF40-202ENST00000357890 FAM53CQ9NYF3 392 aa11.11□□□□□ -0.63
RNF40-202ENST00000357890 TRIM10Q9UDY6 481 aa11.11□□□□□ -0.63
RNF40-202ENST00000357890 TRPM3Q9HCF6 1732 aaPredicted RBP11.1□□□□□ -0.63
RNF40-202ENST00000357890 KIF1CO43896 1103 aaKnown RBP11.1□□□□□ -0.63
RNF40-202ENST00000357890 CLTAP09496 248 aa11.1□□□□□ -0.63
RNF40-202ENST00000357890 KIF5BP33176 963 aa11.1□□□□□ -0.63
RNF40-202ENST00000357890 PPP1R7Q15435 360 aa11.1□□□□□ -0.63
RNF40-202ENST00000357890 AP1ARQ63HQ0 302 aa11.1□□□□□ -0.63
RNF40-202ENST00000357890 ZNF34Q8IZ26 560 aa11.1□□□□□ -0.63
RNF40-202ENST00000357890 ANKRD13CQ8N6S4 541 aa11.1□□□□□ -0.63
RNF40-202ENST00000357890 VGLL2Q8N8G2 317 aa11.1□□□□□ -0.63
RNF40-202ENST00000357890 GSDMAQ96QA5 445 aa11.1□□□□□ -0.63
RNF40-202ENST00000357890 ZSCAN10Q96SZ4 725 aaPredicted RBP11.1□□□□□ -0.63
RNF40-202ENST00000357890 TFR2Q9UP52 801 aa11.1□□□□□ -0.63
RNF40-202ENST00000357890 ARFGEF2Q9Y6D5 1785 aa11.1□□□□□ -0.63
RNF40-202ENST00000357890 USP17L12C9JPN9 530 aa11.1□□□□□ -0.63
RNF40-202ENST00000357890 USP17L21D6R901 530 aa11.1□□□□□ -0.63
RNF40-202ENST00000357890 MPHOSPH10O00566 681 aaKnown RBP11.1□□□□□ -0.63
RNF40-202ENST00000357890 TACC1O75410 805 aa11.1□□□□□ -0.63
RNF40-202ENST00000357890 USP5P45974 858 aa11.1□□□□□ -0.63
RNF40-202ENST00000357890 RIC1Q4ADV7 1423 aa11.1□□□□□ -0.63
RNF40-202ENST00000357890 CCDC40Q4G0X9 1142 aa11.1□□□□□ -0.63
RNF40-202ENST00000357890 NAIF1Q69YI7 327 aaPredicted RBP11.1□□□□□ -0.63
RNF40-202ENST00000357890 CCDC42Q96M95 316 aa11.1□□□□□ -0.63
RNF40-202ENST00000357890 C8orf37Q96NL8 207 aa11.1□□□□□ -0.63
RNF40-202ENST00000357890 VAT1LQ9HCJ6 419 aa11.1□□□□□ -0.63
RNF40-202ENST00000357890 PNPLA7Q6ZV29 1317 aa11.1□□□□□ -0.63
RNF40-202ENST00000357890 TCRBV5S4A2TA0A5A2 114 aa11.1□□□□□ -0.63
RNF40-202ENST00000357890 TLDC2A0PJX2 215 aa11.1□□□□□ -0.63
RNF40-202ENST00000357890 CRKLP46109 303 aaKnown RBP11.1□□□□□ -0.63
RNF40-202ENST00000357890 MORC3Q14149 939 aa11.1□□□□□ -0.63
RNF40-202ENST00000357890 HEATR3Q7Z4Q2 680 aa11.1□□□□□ -0.63
RNF40-202ENST00000357890 ZNF579Q8NAF0 562 aaKnown RBP11.1□□□□□ -0.63
RNF40-202ENST00000357890 DYDC1Q8WWB3 177 aa11.1□□□□□ -0.63
RNF40-202ENST00000357890 ALS2CR12Q96Q35 445 aa11.1□□□□□ -0.63
RNF40-202ENST00000357890 TCP11L1Q9NUJ3 509 aa11.1□□□□□ -0.63
RNF40-202ENST00000357890 ABCC6O95255 1503 aa11.09□□□□□ -0.63
RNF40-202ENST00000357890 KCNJ18B7U540 433 aa11.09□□□□□ -0.63
RNF40-202ENST00000357890 BMP6P22004 513 aa11.09□□□□□ -0.63
RNF40-202ENST00000357890 KRT83P78385 493 aa11.09□□□□□ -0.63
RNF40-202ENST00000357890 SATB1Q01826 763 aa11.09□□□□□ -0.63
RNF40-202ENST00000357890 KCNJ12Q14500 433 aa11.09□□□□□ -0.63
RNF40-202ENST00000357890 TCP11Q8WWU5 503 aa11.09□□□□□ -0.63
RNF40-202ENST00000357890 ZBTB12Q9Y330 459 aaPredicted RBP11.09□□□□□ -0.63
RNF40-202ENST00000357890 EPN1Q9Y6I3 576 aaPredicted RBP11.09□□□□□ -0.63
RNF40-202ENST00000357890 SIPA1L3O60292 1781 aaPredicted RBP11.09□□□□□ -0.63
RNF40-202ENST00000357890 FGFR2P21802 821 aa11.09□□□□□ -0.63
RNF40-202ENST00000357890 TOB1P50616 345 aaPredicted RBP11.09□□□□□ -0.63
RNF40-202ENST00000357890 RCAN1P53805 252 aa11.09□□□□□ -0.63
RNF40-202ENST00000357890 MAP2K1Q02750 393 aaPredicted RBP11.09□□□□□ -0.63
RNF40-202ENST00000357890 PTPROQ16827 1216 aa11.09□□□□□ -0.63
RNF40-202ENST00000357890 DTHD1Q6ZMT9 781 aa11.09□□□□□ -0.63
RNF40-202ENST00000357890 DZIP1Q86YF9 867 aaKnown RBP11.09□□□□□ -0.63
RNF40-202ENST00000357890 TAF4BQ92750 862 aa11.09□□□□□ -0.63
RNF40-202ENST00000357890 CCDC43Q96MW1 224 aaKnown RBP11.09□□□□□ -0.63
RNF40-202ENST00000357890 PANX2Q96RD6 677 aa11.09□□□□□ -0.63
RNF40-202ENST00000357890 PLEKHA8P1O95397 391 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms