RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 FAM114A1Q8IWE2 563 aa19.86■□□□□ 0.77
RTN4-204ENST00000357732 ZNHIT6Q9NWK9 470 aaKnown RBP19.86■□□□□ 0.77
RTN4-204ENST00000357732 FEZ2Q9UHY8 353 aaPredicted RBP19.86■□□□□ 0.77
RTN4-204ENST00000357732 GUCA1BQ9UMX6 200 aa19.86■□□□□ 0.77
RTN4-204ENST00000357732 ZNF652Q9Y2D9 606 aa19.86■□□□□ 0.77
RTN4-204ENST00000357732 GDAQ9Y2T3 454 aa19.86■□□□□ 0.77
RTN4-204ENST00000357732 CCDC47Q96A33 483 aaKnown RBP19.85■□□□□ 0.77
RTN4-204ENST00000357732 KBTBD4Q9NVX7 518 aa19.85■□□□□ 0.77
RTN4-204ENST00000357732 KIAA1551Q9HCM1 1747 aa19.85■□□□□ 0.77
RTN4-204ENST00000357732 BICDL2A1A5D9 508 aa19.85■□□□□ 0.77
RTN4-204ENST00000357732 EIF3CLB5ME19 914 aaKnown RBP19.85■□□□□ 0.77
RTN4-204ENST00000357732 SF3B3Q15393 1217 aaKnown RBP19.85■□□□□ 0.77
RTN4-204ENST00000357732 CCDC122Q5T0U0 273 aa19.85■□□□□ 0.77
RTN4-204ENST00000357732 C3orf67Q6ZVT6 689 aa19.85■□□□□ 0.77
RTN4-204ENST00000357732 ANKS1AQ92625 1134 aa19.85■□□□□ 0.77
RTN4-204ENST00000357732 EIF3CQ99613 913 aaKnown RBP19.85■□□□□ 0.77
RTN4-204ENST00000357732 TSGA10Q9BZW7 698 aa19.85■□□□□ 0.77
RTN4-204ENST00000357732 FAN1Q9Y2M0 1017 aa19.85■□□□□ 0.77
RTN4-204ENST00000357732 GYS2P54840 703 aa19.84■□□□□ 0.77
RTN4-204ENST00000357732 NCAPH2Q6IBW4 605 aa19.84■□□□□ 0.77
RTN4-204ENST00000357732 DGKHQ86XP1 1220 aa19.84■□□□□ 0.77
RTN4-204ENST00000357732 CCDC102AQ96A19 550 aa19.84■□□□□ 0.77
RTN4-204ENST00000357732 AK8Q96MA6 479 aa19.84■□□□□ 0.77
RTN4-204ENST00000357732 TTYH3Q9C0H2 523 aa19.84■□□□□ 0.77
RTN4-204ENST00000357732 A0A1W2PQJ5 194 aa19.84■□□□□ 0.77
RTN4-204ENST00000357732 M0R2N6 131 aa19.84■□□□□ 0.77
RTN4-204ENST00000357732 HERVK_113P62684 666 aa19.84■□□□□ 0.77
RTN4-204ENST00000357732 NAALADL2Q58DX5 795 aa19.84■□□□□ 0.77
RTN4-204ENST00000357732 WDR59Q6PJI9 974 aa19.84■□□□□ 0.77
RTN4-204ENST00000357732 NSUN4Q96CB9 384 aaKnown RBP19.84■□□□□ 0.77
RTN4-204ENST00000357732 TRIM47Q96LD4 638 aa19.84■□□□□ 0.77
RTN4-204ENST00000357732 DCP1AQ9NPI6 582 aaPredicted RBP19.84■□□□□ 0.77
RTN4-204ENST00000357732 EXOC1Q9NV70 894 aa19.84■□□□□ 0.77
RTN4-204ENST00000357732 KLRC4O43908 158 aa19.83■□□□□ 0.77
RTN4-204ENST00000357732 ZBED6P86452 979 aa19.83■□□□□ 0.77
RTN4-204ENST00000357732 COBLL1Q53SF7 1204 aa19.83■□□□□ 0.77
RTN4-204ENST00000357732 TTI2Q6NXR4 508 aa19.83■□□□□ 0.77
RTN4-204ENST00000357732 SRLQ86TD4 932 aa19.83■□□□□ 0.77
RTN4-204ENST00000357732 GOLGA6L1Q8N7Z2 621 aa19.83■□□□□ 0.77
RTN4-204ENST00000357732 ZNF384Q8TF68 577 aa19.83■□□□□ 0.77
RTN4-204ENST00000357732 RGL2O15211 777 aa19.83■□□□□ 0.76
RTN4-204ENST00000357732 HOXA7P31268 230 aaPredicted RBP19.83■□□□□ 0.76
RTN4-204ENST00000357732 DDB1Q16531 1140 aa19.83■□□□□ 0.76
RTN4-204ENST00000357732 CLEC4GQ6UXB4 293 aa19.83■□□□□ 0.76
RTN4-204ENST00000357732 KIAA1328Q86T90 577 aa19.83■□□□□ 0.76
RTN4-204ENST00000357732 PURBQ96QR8 312 aaKnown RBP19.83■□□□□ 0.76
RTN4-204ENST00000357732 RASSF4Q9H2L5 321 aa19.83■□□□□ 0.76
RTN4-204ENST00000357732 COL16A1Q07092 1604 aaPredicted RBP19.82■□□□□ 0.76
RTN4-204ENST00000357732 CCDC194A0A1B0GVG4 234 aa19.82■□□□□ 0.76
RTN4-204ENST00000357732 LRRIQ3A6PVS8 624 aaPredicted RBP19.82■□□□□ 0.76
RTN4-204ENST00000357732 UBA7P41226 1012 aa19.82■□□□□ 0.76
RTN4-204ENST00000357732 EVX2Q03828 476 aa19.82■□□□□ 0.76
RTN4-204ENST00000357732 ITIH3Q06033 890 aa19.82■□□□□ 0.76
RTN4-204ENST00000357732 ERFEQ4G0M1 354 aa19.82■□□□□ 0.76
RTN4-204ENST00000357732 FNBP4Q8N3X1 1017 aaPredicted RBP19.82■□□□□ 0.76
RTN4-204ENST00000357732 JAKMIP2Q96AA8 810 aa19.82■□□□□ 0.76
RTN4-204ENST00000357732 CDCA7Q9BWT1 371 aaPredicted RBP19.82■□□□□ 0.76
RTN4-204ENST00000357732 SUGCTQ9HAC7 445 aa19.82■□□□□ 0.76
RTN4-204ENST00000357732 TSPY2A6NKD2 308 aa19.81■□□□□ 0.76
RTN4-204ENST00000357732 ADAMTS2O95450 1211 aa19.81■□□□□ 0.76
RTN4-204ENST00000357732 FBXO33Q7Z6M2 555 aa19.81■□□□□ 0.76
RTN4-204ENST00000357732 FAM84BQ96KN1 310 aaPredicted RBP19.81■□□□□ 0.76
RTN4-204ENST00000357732 KAT14Q9H8E8 782 aa19.81■□□□□ 0.76
RTN4-204ENST00000357732 MYO1CO00159 1063 aa19.81■□□□□ 0.76
RTN4-204ENST00000357732 N4BP1O75113 896 aaKnown RBP19.81■□□□□ 0.76
RTN4-204ENST00000357732 RCSD1Q6JBY9 416 aa19.81■□□□□ 0.76
RTN4-204ENST00000357732 CCDC70Q6NSX1 233 aa19.81■□□□□ 0.76
RTN4-204ENST00000357732 MARCH10Q8NA82 808 aaPredicted RBP19.81■□□□□ 0.76
RTN4-204ENST00000357732 COG1Q8WTW3 980 aa19.81■□□□□ 0.76
RTN4-204ENST00000357732 TUBGCP2Q9BSJ2 902 aa19.81■□□□□ 0.76
RTN4-204ENST00000357732 PODXL2Q9NZ53 605 aa19.81■□□□□ 0.76
RTN4-204ENST00000357732 TRIM49BA6NDI0 452 aa19.8■□□□□ 0.76
RTN4-204ENST00000357732 COBLO75128 1261 aa19.8■□□□□ 0.76
RTN4-204ENST00000357732 CCNE1P24864 410 aa19.8■□□□□ 0.76
RTN4-204ENST00000357732 ERGIC2Q96RQ1 377 aa19.8■□□□□ 0.76
RTN4-204ENST00000357732 ATP1A1P05023 1023 aaKnown RBP19.8■□□□□ 0.76
RTN4-204ENST00000357732 TRIM21P19474 475 aaKnown RBP19.8■□□□□ 0.76
RTN4-204ENST00000357732 GRM4Q14833 912 aa19.8■□□□□ 0.76
RTN4-204ENST00000357732 ZSCAN29Q8IWY8 852 aaPredicted RBP19.8■□□□□ 0.76
RTN4-204ENST00000357732 RASSF8Q8NHQ8 419 aa19.8■□□□□ 0.76
RTN4-204ENST00000357732 MAPK8IP1Q9UQF2 711 aa19.8■□□□□ 0.76
RTN4-204ENST00000357732 MYH14Q7Z406 1995 aaKnown RBP19.8■□□□□ 0.76
RTN4-204ENST00000357732 PRLRP16471 622 aa19.79■□□□□ 0.76
RTN4-204ENST00000357732 MECOMQ03112 1051 aa19.79■□□□□ 0.76
RTN4-204ENST00000357732 ORC2Q13416 577 aaPredicted RBP19.79■□□□□ 0.76
RTN4-204ENST00000357732 ZNF572Q7Z3I7 529 aaPredicted RBP19.79■□□□□ 0.76
RTN4-204ENST00000357732 CSGALNACT2Q8N6G5 542 aa19.79■□□□□ 0.76
RTN4-204ENST00000357732 P2RX5Q93086 422 aa19.79■□□□□ 0.76
RTN4-204ENST00000357732 MMS19Q96T76 1030 aa19.79■□□□□ 0.76
RTN4-204ENST00000357732 LZTS2Q9BRK4 669 aa19.79■□□□□ 0.76
RTN4-204ENST00000357732 MINPP1Q9UNW1 487 aa19.79■□□□□ 0.76
RTN4-204ENST00000357732 RRP15Q9Y3B9 282 aaKnown RBP19.79■□□□□ 0.76
RTN4-204ENST00000357732 FAM205AQ6ZU69 1335 aa19.79■□□□□ 0.76
RTN4-204ENST00000357732 TFRCP02786 760 aaKnown RBP19.79■□□□□ 0.76
RTN4-204ENST00000357732 HNRNPH3P31942 346 aaKnown RBP19.79■□□□□ 0.76
RTN4-204ENST00000357732 PMS1P54277 932 aaKnown RBP19.79■□□□□ 0.76
RTN4-204ENST00000357732 SF3B2Q13435 895 aaKnown RBP19.79■□□□□ 0.76
RTN4-204ENST00000357732 NHEJ1Q9H9Q4 299 aaPredicted RBP19.79■□□□□ 0.76
RTN4-204ENST00000357732 TRIM10Q9UDY6 481 aa19.79■□□□□ 0.76
RTN4-204ENST00000357732 HPCAL4Q9UM19 191 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms