RNA–Protein interactions for RNA: ENST00000357457.8

COL4A3BP-202, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-202ENST00000357457 SLF1Q9BQI6 1058 aa10.29□□□□□ -0.76
COL4A3BP-202ENST00000357457 ARPP21Q9UBL0 812 aaPredicted RBP10.29□□□□□ -0.76
COL4A3BP-202ENST00000357457 PCDHB13Q9Y5F0 798 aa10.29□□□□□ -0.76
COL4A3BP-202ENST00000357457 SYNRGQ9UMZ2 1314 aa10.29□□□□□ -0.76
COL4A3BP-202ENST00000357457 REV3LO60673 3130 aa10.28□□□□□ -0.76
COL4A3BP-202ENST00000357457 IGKV6D-41A0A0C4DH26 115 aa10.28□□□□□ -0.76
COL4A3BP-202ENST00000357457 GSG1L2A8MUP6 293 aa10.28□□□□□ -0.76
COL4A3BP-202ENST00000357457 NDUFB10O96000 172 aa10.28□□□□□ -0.76
COL4A3BP-202ENST00000357457 RASA1P20936 1047 aa10.28□□□□□ -0.76
COL4A3BP-202ENST00000357457 DNAJB2P25686 324 aa10.28□□□□□ -0.76
COL4A3BP-202ENST00000357457 GJA9P57773 515 aa10.28□□□□□ -0.76
COL4A3BP-202ENST00000357457 ACVR2BQ13705 512 aa10.28□□□□□ -0.76
COL4A3BP-202ENST00000357457 TMEM240Q5SV17 173 aa10.28□□□□□ -0.76
COL4A3BP-202ENST00000357457 SNRNP48Q6IEG0 339 aaKnown RBP10.28□□□□□ -0.76
COL4A3BP-202ENST00000357457 PCSK9Q8NBP7 692 aaKnown RBP10.28□□□□□ -0.76
COL4A3BP-202ENST00000357457 RNF25Q96BH1 459 aaPredicted RBP10.28□□□□□ -0.76
COL4A3BP-202ENST00000357457 DDX11Q96FC9 970 aa10.28□□□□□ -0.76
COL4A3BP-202ENST00000357457 FGD4Q96M96 766 aa10.28□□□□□ -0.76
COL4A3BP-202ENST00000357457 NUP88Q99567 741 aaPredicted RBP10.28□□□□□ -0.76
COL4A3BP-202ENST00000357457 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.28□□□□□ -0.76
COL4A3BP-202ENST00000357457 UPF3AQ9H1J1 476 aaKnown RBP10.28□□□□□ -0.76
COL4A3BP-202ENST00000357457 ABHD16BQ9H3Z7 469 aa10.28□□□□□ -0.76
COL4A3BP-202ENST00000357457 ZNF576Q9H609 170 aa10.28□□□□□ -0.76
COL4A3BP-202ENST00000357457 SLC38A10Q9HBR0 1119 aa10.28□□□□□ -0.76
COL4A3BP-202ENST00000357457 DDX19BQ9UMR2 479 aa10.28□□□□□ -0.76
COL4A3BP-202ENST00000357457 MROH7Q68CQ1 1323 aa10.28□□□□□ -0.76
COL4A3BP-202ENST00000357457 MYADML2A6NDP7 307 aa10.27□□□□□ -0.77
COL4A3BP-202ENST00000357457 ARVCFO00192 962 aa10.27□□□□□ -0.77
COL4A3BP-202ENST00000357457 CTAGE5O15320 804 aa10.27□□□□□ -0.77
COL4A3BP-202ENST00000357457 ADCY6O43306 1168 aa10.27□□□□□ -0.77
COL4A3BP-202ENST00000357457 ZBED4O75132 1171 aa10.27□□□□□ -0.77
COL4A3BP-202ENST00000357457 ASGR1P07306 291 aa10.27□□□□□ -0.77
COL4A3BP-202ENST00000357457 IRX5P78411 483 aaPredicted RBP10.27□□□□□ -0.77
COL4A3BP-202ENST00000357457 PPIGQ13427 754 aaKnown RBP eCLIP10.27□□□□□ -0.771e-6■■■□□ 19
COL4A3BP-202ENST00000357457 USP38Q8NB14 1042 aa10.27□□□□□ -0.77
COL4A3BP-202ENST00000357457 CHST13Q8NET6 341 aa10.27□□□□□ -0.77
COL4A3BP-202ENST00000357457 TIFAQ96CG3 184 aa10.27□□□□□ -0.77
COL4A3BP-202ENST00000357457 GLT1D1Q96MS3 346 aa10.27□□□□□ -0.77
COL4A3BP-202ENST00000357457 PHF12Q96QT6 1004 aa10.27□□□□□ -0.77
COL4A3BP-202ENST00000357457 KATNBL1Q9H079 304 aa10.27□□□□□ -0.77
COL4A3BP-202ENST00000357457 MKNK2Q9HBH9 465 aa10.27□□□□□ -0.77
COL4A3BP-202ENST00000357457 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.27□□□□□ -0.77
COL4A3BP-202ENST00000357457 SYNPO2Q9UMS6 1093 aa10.27□□□□□ -0.77
COL4A3BP-202ENST00000357457 CD4P01730 458 aa10.26□□□□□ -0.77
COL4A3BP-202ENST00000357457 C6orf222P0C671 652 aaPredicted RBP10.26□□□□□ -0.77
COL4A3BP-202ENST00000357457 CLCN6P51797 869 aa10.26□□□□□ -0.77
COL4A3BP-202ENST00000357457 OAZ1P54368 228 aa10.26□□□□□ -0.77
COL4A3BP-202ENST00000357457 CCDC144BQ3MJ40 725 aa10.26□□□□□ -0.77
COL4A3BP-202ENST00000357457 TJAP1Q5JTD0 557 aa10.26□□□□□ -0.77
COL4A3BP-202ENST00000357457 CCDC174Q6PII3 467 aa10.26□□□□□ -0.77
COL4A3BP-202ENST00000357457 SLC43A3Q8NBI5 491 aa10.26□□□□□ -0.77
COL4A3BP-202ENST00000357457 OSBP2Q969R2 916 aa10.26□□□□□ -0.77
COL4A3BP-202ENST00000357457 CHMP4BQ9H444 224 aaKnown RBP10.26□□□□□ -0.77
COL4A3BP-202ENST00000357457 SPC25Q9HBM1 224 aa10.26□□□□□ -0.77
COL4A3BP-202ENST00000357457 CLIP2Q9UDT6 1046 aa10.26□□□□□ -0.77
COL4A3BP-202ENST00000357457 FBXO40Q9UH90 709 aa10.26□□□□□ -0.77
COL4A3BP-202ENST00000357457 FEM1BQ9UK73 627 aa10.26□□□□□ -0.77
COL4A3BP-202ENST00000357457 ZHX1Q9UKY1 873 aaPredicted RBP10.26□□□□□ -0.77
COL4A3BP-202ENST00000357457 COG6Q9Y2V7 657 aa10.26□□□□□ -0.77
COL4A3BP-202ENST00000357457 A0A0U1RQG5 324 aaPredicted RBP10.25□□□□□ -0.77
COL4A3BP-202ENST00000357457 RAD21O60216 631 aa10.25□□□□□ -0.77
COL4A3BP-202ENST00000357457 FDX1P10109 184 aa10.25□□□□□ -0.77
COL4A3BP-202ENST00000357457 CSF2RAP15509 400 aa10.25□□□□□ -0.77
COL4A3BP-202ENST00000357457 GNASQ5JWF2 1037 aa10.25□□□□□ -0.77
COL4A3BP-202ENST00000357457 AKNAD1Q5T1N1 836 aa10.25□□□□□ -0.77
COL4A3BP-202ENST00000357457 ZNF365Q70YC5 407 aa10.25□□□□□ -0.77
COL4A3BP-202ENST00000357457 ARMCX2Q7L311 632 aa10.25□□□□□ -0.77
COL4A3BP-202ENST00000357457 FAM126BQ8IXS8 530 aa10.25□□□□□ -0.77
COL4A3BP-202ENST00000357457 CCDC144CPQ8IYA2 1237 aa10.25□□□□□ -0.77
COL4A3BP-202ENST00000357457 CPXCR1Q8N123 301 aa10.25□□□□□ -0.77
COL4A3BP-202ENST00000357457 ANKRD35Q8N283 1001 aa10.25□□□□□ -0.77
COL4A3BP-202ENST00000357457 TMEM199Q8N511 208 aa10.25□□□□□ -0.77
COL4A3BP-202ENST00000357457 FAM133AQ8N9E0 248 aa10.25□□□□□ -0.77
COL4A3BP-202ENST00000357457 KBTBD3Q8NAB2 608 aa10.25□□□□□ -0.77
COL4A3BP-202ENST00000357457 GMCL1P1Q8NEA9 526 aa10.25□□□□□ -0.77
COL4A3BP-202ENST00000357457 KIF12Q96FN5 646 aa10.25□□□□□ -0.77
COL4A3BP-202ENST00000357457 PBX4Q9BYU1 374 aa10.25□□□□□ -0.77
COL4A3BP-202ENST00000357457 LRRCC1Q9C099 1032 aa10.25□□□□□ -0.77
COL4A3BP-202ENST00000357457 RAVER2Q9HCJ3 691 aaKnown RBP10.25□□□□□ -0.77
COL4A3BP-202ENST00000357457 MTMR4Q9NYA4 1195 aa10.25□□□□□ -0.77
COL4A3BP-202ENST00000357457 TRANK1O15050 2925 aa10.25□□□□□ -0.77
COL4A3BP-202ENST00000357457 BDP1A6H8Y1 2624 aa10.24□□□□□ -0.77
COL4A3BP-202ENST00000357457 GRXCR1A8MXD5 290 aa10.24□□□□□ -0.77
COL4A3BP-202ENST00000357457 MINDY4BA8MYZ0 360 aa10.24□□□□□ -0.77
COL4A3BP-202ENST00000357457 MAP3K13O43283 966 aa10.24□□□□□ -0.77
COL4A3BP-202ENST00000357457 TTLL1O95922 423 aa10.24□□□□□ -0.77
COL4A3BP-202ENST00000357457 GNAT2P19087 354 aa10.24□□□□□ -0.77
COL4A3BP-202ENST00000357457 PBX2P40425 430 aa10.24□□□□□ -0.77
COL4A3BP-202ENST00000357457 PSRC1Q6PGN9 363 aaPredicted RBP10.24□□□□□ -0.77
COL4A3BP-202ENST00000357457 ZNF444Q8N0Y2 327 aaPredicted RBP10.24□□□□□ -0.77
COL4A3BP-202ENST00000357457 ATXN2LQ8WWM7 1075 aaKnown RBP10.24□□□□□ -0.77
COL4A3BP-202ENST00000357457 HERVK_113Q902F9 699 aa10.24□□□□□ -0.77
COL4A3BP-202ENST00000357457 APPBP2Q92624 585 aa10.24□□□□□ -0.77
COL4A3BP-202ENST00000357457 KIFC2Q96AC6 838 aa10.24□□□□□ -0.77
COL4A3BP-202ENST00000357457 VTI1AQ96AJ9 217 aa10.24□□□□□ -0.77
COL4A3BP-202ENST00000357457 CEP95Q96GE4 821 aa10.24□□□□□ -0.77
COL4A3BP-202ENST00000357457 BCL11AQ9H165 835 aa10.24□□□□□ -0.77
COL4A3BP-202ENST00000357457 ZNF287Q9HBT7 754 aa10.24□□□□□ -0.77
COL4A3BP-202ENST00000357457 EPB41L4AQ9HCS5 686 aaPredicted RBP10.24□□□□□ -0.77
COL4A3BP-202ENST00000357457 ECHDC1Q9NTX5 307 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms